RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 ZNF846Q147U1 533 aa12.89□□□□□ -0.35
PDZD4-209ENST00000544474 GRM3Q14832 879 aa12.89□□□□□ -0.35
PDZD4-209ENST00000544474 LAPTM4AQ15012 233 aa12.89□□□□□ -0.35
PDZD4-209ENST00000544474 IPMKQ8NFU5 416 aa12.89□□□□□ -0.35
PDZD4-209ENST00000544474 ZNF641Q96N77 438 aaPredicted RBP12.89□□□□□ -0.35
PDZD4-209ENST00000544474 FTHL17Q9BXU8 183 aa12.89□□□□□ -0.35
PDZD4-209ENST00000544474 RERGLQ9H628 205 aa12.89□□□□□ -0.35
PDZD4-209ENST00000544474 RPF1Q9H9Y2 349 aaKnown RBP12.89□□□□□ -0.35
PDZD4-209ENST00000544474 PLAC1Q9HBJ0 212 aa12.89□□□□□ -0.35
PDZD4-209ENST00000544474 PKD2L2Q9NZM6 624 aa12.89□□□□□ -0.35
PDZD4-209ENST00000544474 SCN9AQ15858 1988 aa12.89□□□□□ -0.35
PDZD4-209ENST00000544474 ADGRA2Q96PE1 1338 aa12.89□□□□□ -0.35
PDZD4-209ENST00000544474 M0R3G1 203 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 DYNC1LI2O43237 492 aaPredicted RBP12.88□□□□□ -0.35
PDZD4-209ENST00000544474 ITGB6P18564 788 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 IL10P22301 178 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 CXCR2P25025 360 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 CLCN3P51790 818 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 EFNA5P52803 228 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 CDK18Q07002 472 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 NFATC3Q12968 1075 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 SPDYE2Q495Y8 402 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 ATAD3BQ5T9A4 648 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 BTBD8Q5XKL5 378 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 RALGPS2Q86X27 583 aaPredicted RBP12.88□□□□□ -0.35
PDZD4-209ENST00000544474 CARM1Q86X55 608 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 SHCBP1Q8NEM2 672 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 HTR3CQ8WXA8 447 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 TANKQ92844 425 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 ACDQ96AP0 544 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 C2orf49Q9BVC5 232 aaPredicted RBP12.88□□□□□ -0.35
PDZD4-209ENST00000544474 HOXD1Q9GZZ0 328 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 C12orf4Q9NQ89 552 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 ZNF831Q5JPB2 1677 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 CLDN25C9JDP6 229 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 M0QX08 132 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 RGS13O14921 159 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 ASNA1O43681 348 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 PMPCBO75439 489 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 CLPXO76031 633 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 SRP72O76094 671 aaKnown RBP12.88□□□□□ -0.35
PDZD4-209ENST00000544474 PIGRP01833 764 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 ATP6V1B2P21281 511 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 CNTFP26441 200 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 HPCAL1P37235 193 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 GNG2P59768 71 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 MPP1Q00013 466 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 LY6KQ17RY6 165 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 ZPBP2Q6X784 338 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 ADCK1Q86TW2 530 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 CCDC103Q8IW40 242 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 REM2Q8IYK8 340 aaPredicted RBP12.88□□□□□ -0.35
PDZD4-209ENST00000544474 HCAR2Q8TDS4 363 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 DHX33Q9H6R0 707 aaKnown RBP12.88□□□□□ -0.35
PDZD4-209ENST00000544474 USP22Q9UPT9 525 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 TRAF6Q9Y4K3 522 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 SNX10Q9Y5X0 201 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 SIPA1L1O43166 1804 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 H3BMM5 538 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 VWA5AO00534 786 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 NOBOXO60393 691 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 SNX2O60749 519 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 MYL4P12829 197 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 CYP4B1P13584 511 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 DCKP27707 260 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 ATP6V0D1P61421 351 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 GRM1Q13255 1194 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 PDK2Q15119 407 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 TMEM236Q5W0B7 351 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 DCP2Q8IU60 420 aaKnown RBP12.88□□□□□ -0.35
PDZD4-209ENST00000544474 DHRSXQ8N5I4 330 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 ESAMQ96AP7 390 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 VPS33AQ96AX1 596 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 FCRL3Q96P31 734 aaPredicted RBP12.88□□□□□ -0.35
PDZD4-209ENST00000544474 MUC3BQ9H195 1237 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 PRDM12Q9H4Q4 367 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 POMKQ9H5K3 350 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 GIMAP4Q9NUV9 329 aa12.88□□□□□ -0.35
PDZD4-209ENST00000544474 FAM159BA6NKW6 160 aa12.87□□□□□ -0.35
PDZD4-209ENST00000544474 TRIM38O00635 465 aa12.87□□□□□ -0.35
PDZD4-209ENST00000544474 MSI1O43347 362 aaKnown RBP12.87□□□□□ -0.35
PDZD4-209ENST00000544474 IDH3BO43837 385 aa12.87□□□□□ -0.35
PDZD4-209ENST00000544474 ALBP02768 609 aa12.87□□□□□ -0.35
PDZD4-209ENST00000544474 HSPA1AP0DMV8 641 aaKnown RBP12.87□□□□□ -0.35
PDZD4-209ENST00000544474 HSPA1BP0DMV9 641 aaKnown RBP12.87□□□□□ -0.35
PDZD4-209ENST00000544474 ZNF26P17031 533 aaPredicted RBP12.87□□□□□ -0.35
PDZD4-209ENST00000544474 GGT5P36269 586 aa12.87□□□□□ -0.35
PDZD4-209ENST00000544474 ARL2P36404 184 aa12.87□□□□□ -0.35
PDZD4-209ENST00000544474 ASPAP45381 313 aa12.87□□□□□ -0.35
PDZD4-209ENST00000544474 COPZ1P61923 177 aa12.87□□□□□ -0.35
PDZD4-209ENST00000544474 SP2Q02086 613 aa12.87□□□□□ -0.35
PDZD4-209ENST00000544474 EIF2B5Q13144 721 aaKnown RBP12.87□□□□□ -0.35
PDZD4-209ENST00000544474 LAPTM5Q13571 262 aa12.87□□□□□ -0.35
PDZD4-209ENST00000544474 TAZQ16635 292 aa12.87□□□□□ -0.35
PDZD4-209ENST00000544474 UBE2UQ5VVX9 321 aa12.87□□□□□ -0.35
PDZD4-209ENST00000544474 EPGNQ6UW88 154 aa12.87□□□□□ -0.35
PDZD4-209ENST00000544474 ELMOD2Q8IZ81 293 aa12.87□□□□□ -0.35
PDZD4-209ENST00000544474 OR6P1Q8NGX9 317 aa12.87□□□□□ -0.35
PDZD4-209ENST00000544474 TMEM176AQ96HP8 235 aa12.87□□□□□ -0.35
PDZD4-209ENST00000544474 VPS39Q96JC1 886 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms