RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 SKIV2LQ15477 1246 aaKnown RBP30.57■■■□□ 2.48
CCM2-219ENST00000544363 EMC10Q5UCC4 262 aa30.57■■■□□ 2.48
CCM2-219ENST00000544363 PACS1Q6VY07 963 aa30.57■■■□□ 2.48
CCM2-219ENST00000544363 PAF1Q8N7H5 531 aa30.57■■■□□ 2.48
CCM2-219ENST00000544363 STYXQ8WUJ0 223 aa30.57■■■□□ 2.48
CCM2-219ENST00000544363 ECHDC3Q96DC8 303 aa30.57■■■□□ 2.48
CCM2-219ENST00000544363 CPNE1Q99829 537 aa30.57■■■□□ 2.48
CCM2-219ENST00000544363 HEPHQ9BQS7 1158 aa30.57■■■□□ 2.48
CCM2-219ENST00000544363 PSAT1Q9Y617 370 aa30.57■■■□□ 2.48
CCM2-219ENST00000544363 XIRP2A4UGR9 3374 aa30.57■■■□□ 2.48
CCM2-219ENST00000544363 GOLGA8TH3BQL2 631 aa30.56■■■□□ 2.48
CCM2-219ENST00000544363 KRT37O76014 449 aa30.56■■■□□ 2.48
CCM2-219ENST00000544363 KAT7O95251 611 aa30.56■■■□□ 2.48
CCM2-219ENST00000544363 ABL2P42684 1182 aa30.56■■■□□ 2.48
CCM2-219ENST00000544363 AAK1Q2M2I8 961 aa30.56■■■□□ 2.48
CCM2-219ENST00000544363 KDM7AQ6ZMT4 941 aa30.56■■■□□ 2.48
CCM2-219ENST00000544363 SFTPA1Q8IWL2 248 aa30.56■■■□□ 2.48
CCM2-219ENST00000544363 SRRM1Q8IYB3 904 aaKnown RBP30.56■■■□□ 2.48
CCM2-219ENST00000544363 CSGALNACT1Q8TDX6 532 aa30.56■■■□□ 2.48
CCM2-219ENST00000544363 UCMAQ8WVF2 138 aa30.56■■■□□ 2.48
CCM2-219ENST00000544363 NSMCE4AQ9NXX6 385 aa30.56■■■□□ 2.48
CCM2-219ENST00000544363 SENP1Q9P0U3 644 aa30.56■■■□□ 2.48
CCM2-219ENST00000544363 TXNDC16Q9P2K2 825 aa30.56■■■□□ 2.48
CCM2-219ENST00000544363 C2orf81A6NN90 581 aa30.55■■■□□ 2.48
CCM2-219ENST00000544363 AURKAO14965 403 aa30.55■■■□□ 2.48
CCM2-219ENST00000544363 KRT38O76015 456 aa30.55■■■□□ 2.48
CCM2-219ENST00000544363 SNRPAP09012 282 aaKnown RBP30.55■■■□□ 2.48
CCM2-219ENST00000544363 GP5P40197 560 aa30.55■■■□□ 2.48
CCM2-219ENST00000544363 GRIA2P42262 883 aa30.55■■■□□ 2.48
CCM2-219ENST00000544363 CNTN4Q8IWV2 1026 aa30.55■■■□□ 2.48
CCM2-219ENST00000544363 ARFGAP2Q8N6H7 521 aa30.55■■■□□ 2.48
CCM2-219ENST00000544363 PTPRN2Q92932 1015 aa30.55■■■□□ 2.48
CCM2-219ENST00000544363 MAGEE1Q9HCI5 957 aa30.55■■■□□ 2.48
CCM2-219ENST00000544363 CNTFP26441 200 aa30.55■■■□□ 2.48
CCM2-219ENST00000544363 ZNF140P52738 457 aaPredicted RBP30.55■■■□□ 2.48
CCM2-219ENST00000544363 THOC5Q13769 683 aaKnown RBP30.55■■■□□ 2.48
CCM2-219ENST00000544363 FNDC3BQ53EP0 1204 aaKnown RBP30.55■■■□□ 2.48
CCM2-219ENST00000544363 ZSWIM9Q86XI8 627 aa30.55■■■□□ 2.48
CCM2-219ENST00000544363 DNAJC1Q96KC8 554 aaKnown RBP30.55■■■□□ 2.48
CCM2-219ENST00000544363 TRABDQ9H4I3 376 aa30.55■■■□□ 2.48
CCM2-219ENST00000544363 SPTBN5Q9NRC6 3674 aaKnown RBP30.54■■■□□ 2.48
CCM2-219ENST00000544363 A0A0J9YYE9 177 aa30.54■■■□□ 2.48
CCM2-219ENST00000544363 A0A1W2PPM1 405 aa30.54■■■□□ 2.48
CCM2-219ENST00000544363 SLC7A4O43246 635 aa30.54■■■□□ 2.48
CCM2-219ENST00000544363 BUD23O43709 281 aaKnown RBP30.54■■■□□ 2.48
CCM2-219ENST00000544363 SIN3BO75182 1162 aa30.54■■■□□ 2.48
CCM2-219ENST00000544363 TRBC1P01850 177 aa30.54■■■□□ 2.48
CCM2-219ENST00000544363 APODP05090 189 aa30.54■■■□□ 2.48
CCM2-219ENST00000544363 UGT2B4P06133 528 aa30.54■■■□□ 2.48
CCM2-219ENST00000544363 CTPS1P17812 591 aa30.54■■■□□ 2.48
CCM2-219ENST00000544363 ARSDP51689 593 aa30.54■■■□□ 2.48
CCM2-219ENST00000544363 GRTP1Q5TC63 336 aa30.54■■■□□ 2.48
CCM2-219ENST00000544363 GDPD4Q6W3E5 623 aa30.54■■■□□ 2.48
CCM2-219ENST00000544363 NUDT18Q6ZVK8 323 aa30.54■■■□□ 2.48
CCM2-219ENST00000544363 Q7L0L9 218 aa30.54■■■□□ 2.48
CCM2-219ENST00000544363 OR13C4Q8NGS5 318 aa30.54■■■□□ 2.48
CCM2-219ENST00000544363 SPOCK2Q92563 424 aa30.54■■■□□ 2.48
CCM2-219ENST00000544363 HDAC10Q969S8 669 aa30.54■■■□□ 2.48
CCM2-219ENST00000544363 MTBPQ96DY7 904 aa30.54■■■□□ 2.48
CCM2-219ENST00000544363 MTG2Q9H4K7 406 aa30.54■■■□□ 2.48
CCM2-219ENST00000544363 NLE1Q9NVX2 485 aaPredicted RBP30.54■■■□□ 2.48
CCM2-219ENST00000544363 GGT7Q9UJ14 662 aa30.54■■■□□ 2.48
CCM2-219ENST00000544363 PHTF1Q9UMS5 762 aa30.54■■■□□ 2.48
CCM2-219ENST00000544363 WASF2Q9Y6W5 498 aa30.54■■■□□ 2.48
CCM2-219ENST00000544363 A0A1W2PQ67 120 aa30.53■■■□□ 2.48
CCM2-219ENST00000544363 TRIM49D1C9J1S8 452 aa30.53■■■□□ 2.48
CCM2-219ENST00000544363 RPP40O75818 363 aaKnown RBP30.53■■■□□ 2.48
CCM2-219ENST00000544363 BMP1P13497 986 aa30.53■■■□□ 2.48
CCM2-219ENST00000544363 CREB1P16220 341 aa30.53■■■□□ 2.48
CCM2-219ENST00000544363 LPOP22079 712 aaPredicted RBP30.53■■■□□ 2.48
CCM2-219ENST00000544363 PSMA3P25788 255 aa30.53■■■□□ 2.48
CCM2-219ENST00000544363 SOX9P48436 509 aa30.53■■■□□ 2.48
CCM2-219ENST00000544363 PRAMEP78395 509 aa30.53■■■□□ 2.48
CCM2-219ENST00000544363 PDE1BQ01064 536 aa30.53■■■□□ 2.48
CCM2-219ENST00000544363 ZNF234Q14588 700 aa30.53■■■□□ 2.48
CCM2-219ENST00000544363 PTPRCAPQ14761 206 aa30.53■■■□□ 2.48
CCM2-219ENST00000544363 PTPRRQ15256 657 aa30.53■■■□□ 2.48
CCM2-219ENST00000544363 STRA8Q7Z7C7 330 aa30.53■■■□□ 2.48
CCM2-219ENST00000544363 CNPY4Q8N129 248 aa30.53■■■□□ 2.48
CCM2-219ENST00000544363 TTC30BQ8N4P2 665 aa30.53■■■□□ 2.48
CCM2-219ENST00000544363 ZNF366Q8N895 744 aa30.53■■■□□ 2.48
CCM2-219ENST00000544363 SRPK1Q96SB4 655 aaKnown RBP30.53■■■□□ 2.48
CCM2-219ENST00000544363 FAM167BQ9BTA0 163 aa30.53■■■□□ 2.48
CCM2-219ENST00000544363 ALPIP09923 528 aa30.52■■■□□ 2.48
CCM2-219ENST00000544363 ATP1A2P50993 1020 aa30.52■■■□□ 2.48
CCM2-219ENST00000544363 NEPROQ6NW34 567 aa30.52■■■□□ 2.48
CCM2-219ENST00000544363 PLCD3Q8N3E9 789 aa30.52■■■□□ 2.48
CCM2-219ENST00000544363 GRIN3AQ8TCU5 1115 aa30.52■■■□□ 2.48
CCM2-219ENST00000544363 LRIG1Q96JA1 1093 aa30.52■■■□□ 2.48
CCM2-219ENST00000544363 TBATAQ96M53 351 aa30.52■■■□□ 2.48
CCM2-219ENST00000544363 MFSD1Q9H3U5 465 aa30.52■■■□□ 2.48
CCM2-219ENST00000544363 IL36AQ9UHA7 158 aa30.52■■■□□ 2.48
CCM2-219ENST00000544363 PPIL1Q9Y3C6 166 aa30.52■■■□□ 2.48
CCM2-219ENST00000544363 ZNF711Q9Y462 761 aa30.52■■■□□ 2.48
CCM2-219ENST00000544363 MUC22E2RYF6 1773 aaPredicted RBP30.52■■■□□ 2.48
CCM2-219ENST00000544363 HMX2A2RU54 273 aa30.51■■■□□ 2.48
CCM2-219ENST00000544363 MT-ND3P03897 115 aa30.51■■■□□ 2.48
CCM2-219ENST00000544363 BRAFP15056 766 aa30.51■■■□□ 2.48
CCM2-219ENST00000544363 CSE1LP55060 971 aaKnown RBP30.51■■■□□ 2.48
CCM2-219ENST00000544363 TMPRSS15P98073 1019 aa30.51■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms