RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 MAXP61244 160 aa23.37■■□□□ 1.33
CHFR-222ENST00000544093 GBE1Q04446 702 aa23.37■■□□□ 1.33
CHFR-222ENST00000544093 RALGDSQ12967 914 aa23.37■■□□□ 1.33
CHFR-222ENST00000544093 MTM1Q13496 603 aa23.37■■□□□ 1.33
CHFR-222ENST00000544093 SMAD1Q15797 465 aaKnown RBP23.37■■□□□ 1.33
CHFR-222ENST00000544093 WSCD2Q2TBF2 565 aa23.37■■□□□ 1.33
CHFR-222ENST00000544093 PROX2Q3B8N5 592 aa23.37■■□□□ 1.33
CHFR-222ENST00000544093 ARMC12Q5T9G4 340 aa23.37■■□□□ 1.33
CHFR-222ENST00000544093 LIPIQ6XZB0 460 aa23.37■■□□□ 1.33
CHFR-222ENST00000544093 TMEM121BQ9BXQ6 578 aaPredicted RBP23.37■■□□□ 1.33
CHFR-222ENST00000544093 USP29Q9HBJ7 922 aa23.37■■□□□ 1.33
CHFR-222ENST00000544093 MBNL1Q9NR56 388 aaKnown RBP23.37■■□□□ 1.33
CHFR-222ENST00000544093 DTLQ9NZJ0 730 aa23.37■■□□□ 1.33
CHFR-222ENST00000544093 NCKIPSDQ9NZQ3 722 aa23.37■■□□□ 1.33
CHFR-222ENST00000544093 PCDHA13Q9Y5I0 950 aa23.37■■□□□ 1.33
CHFR-222ENST00000544093 APOL1O14791 398 aa23.36■■□□□ 1.33
CHFR-222ENST00000544093 PSTPIP1O43586 416 aa23.36■■□□□ 1.33
CHFR-222ENST00000544093 SIGLEC6O43699 453 aa23.36■■□□□ 1.33
CHFR-222ENST00000544093 KRT1P04264 644 aa23.36■■□□□ 1.33
CHFR-222ENST00000544093 CYP2A6P11509 494 aaPredicted RBP23.36■■□□□ 1.33
CHFR-222ENST00000544093 CCNB1P14635 433 aa23.36■■□□□ 1.33
CHFR-222ENST00000544093 COMTP21964 271 aa23.36■■□□□ 1.33
CHFR-222ENST00000544093 ACP1P24666 158 aa23.36■■□□□ 1.33
CHFR-222ENST00000544093 ACADVLP49748 655 aa23.36■■□□□ 1.33
CHFR-222ENST00000544093 ITKQ08881 620 aa23.36■■□□□ 1.33
CHFR-222ENST00000544093 ST3GAL2Q16842 350 aa23.36■■□□□ 1.33
CHFR-222ENST00000544093 SLC9A4Q6AI14 798 aa23.36■■□□□ 1.33
CHFR-222ENST00000544093 CCNI2Q6ZMN8 369 aaPredicted RBP23.36■■□□□ 1.33
CHFR-222ENST00000544093 TMPRSS12Q86WS5 348 aa23.36■■□□□ 1.33
CHFR-222ENST00000544093 CCDC13Q8IYE1 715 aa23.36■■□□□ 1.33
CHFR-222ENST00000544093 CCNYQ8ND76 341 aa23.36■■□□□ 1.33
CHFR-222ENST00000544093 ZNF548Q8NEK5 533 aaPredicted RBP23.36■■□□□ 1.33
CHFR-222ENST00000544093 SEMA3CQ99985 751 aa23.36■■□□□ 1.33
CHFR-222ENST00000544093 SLC13A1Q9BZW2 595 aa23.36■■□□□ 1.33
CHFR-222ENST00000544093 RBM22Q9NW64 420 aaKnown RBP eCLIP23.36■■□□□ 1.33
CHFR-222ENST00000544093 UCKL1Q9NWZ5 548 aa23.36■■□□□ 1.33
CHFR-222ENST00000544093 SPASTQ9UBP0 616 aa23.36■■□□□ 1.33
CHFR-222ENST00000544093 COQ6Q9Y2Z9 468 aa23.36■■□□□ 1.33
CHFR-222ENST00000544093 C3orf70A6NLC5 250 aaPredicted RBP23.35■■□□□ 1.33
CHFR-222ENST00000544093 C1QTNF9BB2RNN3 333 aa23.35■■□□□ 1.33
CHFR-222ENST00000544093 PSMD11O00231 422 aa23.35■■□□□ 1.33
CHFR-222ENST00000544093 TRIM38O00635 465 aa23.35■■□□□ 1.33
CHFR-222ENST00000544093 AQP9O43315 295 aa23.35■■□□□ 1.33
CHFR-222ENST00000544093 RECQL5O94762 991 aaPredicted RBP23.35■■□□□ 1.33
CHFR-222ENST00000544093 PGLSO95336 258 aa23.35■■□□□ 1.33
CHFR-222ENST00000544093 PRKCGP05129 697 aa23.35■■□□□ 1.33
CHFR-222ENST00000544093 C1QTNF9P0C862 333 aa23.35■■□□□ 1.33
CHFR-222ENST00000544093 FECHP22830 423 aa23.35■■□□□ 1.33
CHFR-222ENST00000544093 PPIDQ08752 370 aaKnown RBP23.35■■□□□ 1.33
CHFR-222ENST00000544093 TRAF2Q12933 501 aa23.35■■□□□ 1.33
CHFR-222ENST00000544093 EIF2B5Q13144 721 aaKnown RBP23.35■■□□□ 1.33
CHFR-222ENST00000544093 DNAJC3Q13217 504 aa23.35■■□□□ 1.33
CHFR-222ENST00000544093 CCDC157Q569K6 752 aa23.35■■□□□ 1.33
CHFR-222ENST00000544093 ZNF542PQ5EBM4 170 aa23.35■■□□□ 1.33
CHFR-222ENST00000544093 USP45Q70EL2 814 aa23.35■■□□□ 1.33
CHFR-222ENST00000544093 PLD5Q8N7P1 536 aa23.35■■□□□ 1.33
CHFR-222ENST00000544093 FAM181AQ8N9Y4 354 aa23.35■■□□□ 1.33
CHFR-222ENST00000544093 TPCN2Q8NHX9 752 aa23.35■■□□□ 1.33
CHFR-222ENST00000544093 NSMCE3Q96MG7 304 aa23.35■■□□□ 1.33
CHFR-222ENST00000544093 BRD8Q9H0E9 1235 aa23.35■■□□□ 1.33
CHFR-222ENST00000544093 B4GALT6Q9UBX8 382 aa23.35■■□□□ 1.33
CHFR-222ENST00000544093 APOBEC3BQ9UH17 382 aaKnown RBP23.35■■□□□ 1.33
CHFR-222ENST00000544093 TTC24A2A3L6 582 aaPredicted RBP23.34■■□□□ 1.33
CHFR-222ENST00000544093 TPP1O14773 563 aa23.34■■□□□ 1.33
CHFR-222ENST00000544093 PPP1R12AO14974 1030 aaPredicted RBP23.34■■□□□ 1.33
CHFR-222ENST00000544093 FFAR2O15552 330 aa23.34■■□□□ 1.33
CHFR-222ENST00000544093 VIPR1P32241 457 aa23.34■■□□□ 1.33
CHFR-222ENST00000544093 HNF1BP35680 557 aa23.34■■□□□ 1.33
CHFR-222ENST00000544093 DUSP3P51452 185 aaPredicted RBP23.34■■□□□ 1.33
CHFR-222ENST00000544093 DAB2P98082 770 aa23.34■■□□□ 1.33
CHFR-222ENST00000544093 PPARDQ03181 441 aa23.34■■□□□ 1.33
CHFR-222ENST00000544093 INPP5AQ14642 412 aa23.34■■□□□ 1.33
CHFR-222ENST00000544093 NFATC4Q14934 902 aa23.34■■□□□ 1.33
CHFR-222ENST00000544093 PDK1Q15118 436 aa23.34■■□□□ 1.33
CHFR-222ENST00000544093 BZW1Q7L1Q6 419 aaKnown RBP23.34■■□□□ 1.33
CHFR-222ENST00000544093 KDF1Q8NAX2 398 aaPredicted RBP23.34■■□□□ 1.33
CHFR-222ENST00000544093 SCRN2Q96FV2 425 aa23.34■■□□□ 1.33
CHFR-222ENST00000544093 APOOQ9BUR5 198 aa23.34■■□□□ 1.33
CHFR-222ENST00000544093 DNPEPQ9ULA0 475 aa23.34■■□□□ 1.33
CHFR-222ENST00000544093 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.34■■□□□ 1.33
CHFR-222ENST00000544093 PPIL1Q9Y3C6 166 aa23.34■■□□□ 1.33
CHFR-222ENST00000544093 HEY1Q9Y5J3 304 aa23.34■■□□□ 1.33
CHFR-222ENST00000544093 RAI2Q9Y5P3 530 aa23.34■■□□□ 1.33
CHFR-222ENST00000544093 ALG6Q9Y672 507 aa23.34■■□□□ 1.33
CHFR-222ENST00000544093 GOLGA4Q13439 2230 aaKnown RBP23.34■■□□□ 1.33
CHFR-222ENST00000544093 IGF2RP11717 2491 aa23.33■■□□□ 1.33
CHFR-222ENST00000544093 NDUFA10O95299 355 aa23.33■■□□□ 1.33
CHFR-222ENST00000544093 MAP3K6O95382 1288 aa23.33■■□□□ 1.33
CHFR-222ENST00000544093 CKMT1AP12532 417 aa23.33■■□□□ 1.33
CHFR-222ENST00000544093 KELP23276 732 aa23.33■■□□□ 1.33
CHFR-222ENST00000544093 E2F1Q01094 437 aa23.33■■□□□ 1.33
CHFR-222ENST00000544093 SLC10A2Q12908 348 aaPredicted RBP23.33■■□□□ 1.33
CHFR-222ENST00000544093 TFDP2Q14188 446 aa23.33■■□□□ 1.33
CHFR-222ENST00000544093 ACOX1Q15067 660 aa23.33■■□□□ 1.33
CHFR-222ENST00000544093 TPRG1LQ5T0D9 272 aa23.33■■□□□ 1.33
CHFR-222ENST00000544093 C11orf63Q6NUN7 778 aa23.33■■□□□ 1.33
CHFR-222ENST00000544093 ZCCHC8Q6NZY4 707 aaKnown RBP23.33■■□□□ 1.33
CHFR-222ENST00000544093 DHRS13Q6UX07 377 aa23.33■■□□□ 1.33
CHFR-222ENST00000544093 PHACTR4Q8IZ21 702 aa23.33■■□□□ 1.33
CHFR-222ENST00000544093 SDR16C5Q8N3Y7 309 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms