RNA–Protein interactions for RNA: ENST00000544085.5

AFF1-211, Transcript of AF4/FMR2 family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF1, Length 3,644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-211ENST00000544085 NUP205Q92621 2012 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 SHROOM3Q8TF72 1996 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 MT-ND3P03897 115 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 SNRPAP09012 282 aaKnown RBP8.23□□□□□ -1.09
AFF1-211ENST00000544085 IDO1P14902 403 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 HLA-DPA1P20036 260 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 ALAS2P22557 587 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 ADRA1DP25100 572 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 ETV3P41162 512 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 CD86P42081 329 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 ATP1A2P50993 1020 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 PRSS36Q5K4E3 855 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 CXorf57Q6NSI4 855 aaKnown RBP8.23□□□□□ -1.09
AFF1-211ENST00000544085 TRABD2AQ86V40 505 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 MPP5Q8N3R9 675 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 SPATA22Q8NHS9 363 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 USP13Q92995 863 aaPredicted RBP8.23□□□□□ -1.09
AFF1-211ENST00000544085 ACDQ96AP0 544 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 ZNF669Q96BR6 464 aaPredicted RBP8.23□□□□□ -1.09
AFF1-211ENST00000544085 KIFC1Q9BW19 673 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 TRABDQ9H4I3 376 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 TCF7L2Q9NQB0 619 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 HCFC1R1Q9NWW0 138 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 MOCS1Q9NZB8 636 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 UBP1Q9NZI7 540 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 NYNRINQ9P2P1 1898 aaKnown RBP8.23□□□□□ -1.09
AFF1-211ENST00000544085 HEATR9A2RTY3 570 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 M0QX08 132 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 CBX4O00257 560 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 MAP3K13O43283 966 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 PRMT3O60678 531 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 FSBPO95073 299 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 FGF1P05230 155 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 GSTT2P0CG29 244 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 GSTT2BP0CG30 244 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 BRAFP15056 766 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 ZNF16P17020 682 aaPredicted RBP8.23□□□□□ -1.09
AFF1-211ENST00000544085 GJA1P17302 382 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 GNGT1P63211 74 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 DMC1Q14565 340 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 WDR45BQ5MNZ6 344 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 FYB2Q5VWT5 728 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 FAM109BQ6ICB4 259 aaPredicted RBP8.23□□□□□ -1.09
AFF1-211ENST00000544085 GRASPQ7Z6J2 395 aaPredicted RBP8.23□□□□□ -1.09
AFF1-211ENST00000544085 RASSF3Q86WH2 238 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 BBS7Q8IWZ6 715 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 FIBINQ8TAL6 211 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 DCAKDQ8WVC6 231 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 ARNTL2Q8WYA1 636 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 MRGPRX2Q96LB1 330 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 RBM14Q96PK6 669 aaKnown RBP8.23□□□□□ -1.09
AFF1-211ENST00000544085 SEMA3CQ99985 751 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 MGME1Q9BQP7 344 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 PBX4Q9BYU1 374 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 KCNK9Q9NPC2 374 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 SCUBE2Q9NQ36 999 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 MOSPD1Q9UJG1 213 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 DENND4CQ5VZ89 1909 aa8.22□□□□□ -1.09
AFF1-211ENST00000544085 A0A0D9SEW6 157 aa8.22□□□□□ -1.09
AFF1-211ENST00000544085 MOSPD3O75425 235 aa8.22□□□□□ -1.09
AFF1-211ENST00000544085 PRKACBP22694 351 aa8.22□□□□□ -1.09
AFF1-211ENST00000544085 VARSP26640 1264 aaKnown RBP8.22□□□□□ -1.09
AFF1-211ENST00000544085 GCAP28676 217 aa8.22□□□□□ -1.09
AFF1-211ENST00000544085 CCR2P41597 374 aa8.22□□□□□ -1.09
AFF1-211ENST00000544085 MAPK8P45983 427 aa8.22□□□□□ -1.09
AFF1-211ENST00000544085 SERPINH1P50454 418 aaKnown RBP8.22□□□□□ -1.09
AFF1-211ENST00000544085 PLK1P53350 603 aa8.22□□□□□ -1.09
AFF1-211ENST00000544085 SLC18A1P54219 525 aa8.22□□□□□ -1.09
AFF1-211ENST00000544085 POLE2P56282 527 aa8.22□□□□□ -1.09
AFF1-211ENST00000544085 AP2B1P63010 937 aa8.22□□□□□ -1.09
AFF1-211ENST00000544085 DSC2Q02487 901 aa8.22□□□□□ -1.09
AFF1-211ENST00000544085 MTM1Q13496 603 aa8.22□□□□□ -1.09
AFF1-211ENST00000544085 ANKRD20A4Q4UJ75 823 aa8.22□□□□□ -1.09
AFF1-211ENST00000544085 RNF43Q68DV7 783 aa8.22□□□□□ -1.09
AFF1-211ENST00000544085 PDPK2PQ6A1A2 396 aa8.22□□□□□ -1.09
AFF1-211ENST00000544085 PKN3Q6P5Z2 889 aa8.22□□□□□ -1.09
AFF1-211ENST00000544085 RANBP10Q6VN20 620 aa8.22□□□□□ -1.09
AFF1-211ENST00000544085 PRPF39Q86UA1 669 aaKnown RBP8.22□□□□□ -1.09
AFF1-211ENST00000544085 TMEM135Q86UB9 458 aa8.22□□□□□ -1.09
AFF1-211ENST00000544085 LURAP1LQ8IV03 231 aa8.22□□□□□ -1.09
AFF1-211ENST00000544085 SRRM1Q8IYB3 904 aaKnown RBP8.22□□□□□ -1.09
AFF1-211ENST00000544085 AGGF1Q8N302 714 aaeCLIP8.22□□□□□ -1.09
AFF1-211ENST00000544085 CELF5Q8N6W0 485 aaKnown RBP8.22□□□□□ -1.09
AFF1-211ENST00000544085 TADA1Q96BN2 335 aa8.22□□□□□ -1.09
AFF1-211ENST00000544085 ZNF707Q96C28 371 aaPredicted RBP8.22□□□□□ -1.09
AFF1-211ENST00000544085 TCEAL4Q96EI5 215 aa8.22□□□□□ -1.09
AFF1-211ENST00000544085 GDF15Q99988 308 aa8.22□□□□□ -1.09
AFF1-211ENST00000544085 PPANQ9NQ55 473 aaKnown RBP8.22□□□□□ -1.09
AFF1-211ENST00000544085 L3MBTL1Q9Y468 752 aa8.22□□□□□ -1.09
AFF1-211ENST00000544085 A6NHS1 94 aa8.22□□□□□ -1.09
AFF1-211ENST00000544085 ARHGAP33O14559 1287 aa8.22□□□□□ -1.09
AFF1-211ENST00000544085 PER2O15055 1255 aa8.22□□□□□ -1.09
AFF1-211ENST00000544085 USP12O75317 370 aa8.22□□□□□ -1.09
AFF1-211ENST00000544085 MT-CYBP00156 380 aaPredicted RBP8.22□□□□□ -1.09
AFF1-211ENST00000544085 ALADP13716 330 aa8.22□□□□□ -1.09
AFF1-211ENST00000544085 NRIP1P48552 1158 aa8.22□□□□□ -1.09
AFF1-211ENST00000544085 SGSHP51688 502 aa8.22□□□□□ -1.09
AFF1-211ENST00000544085 NIPAL4Q0D2K0 466 aa8.22□□□□□ -1.09
AFF1-211ENST00000544085 RBM23Q86U06 439 aaKnown RBP8.22□□□□□ -1.09
AFF1-211ENST00000544085 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms