RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 MARCKSL1P49006 195 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 ALG11Q2TAA5 492 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 RNF220Q5VTB9 566 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 RASAL3Q86YV0 1011 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 DENND1CQ8IV53 801 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 UBE2J2Q8N2K1 259 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 SAMD3Q8N6K7 520 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 MARCH7Q9H992 704 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 SALL1Q9NSC2 1324 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 PRR5-ARHGAP8B1AHC4 643 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 SUV39H1O43463 412 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 ITGA2BP08514 1039 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 ARHGAP8P85298 464 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 QPCTQ16769 361 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 PTPRNQ16849 979 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 TMEM119Q4V9L6 283 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 ERICH5Q6P6B1 374 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 ZNF433Q8N7K0 673 aaPredicted RBP15.5■□□□□ 0.07
CHD4-210ENST00000544040 REPS2Q8NFH8 660 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 MRPL57Q9BQC6 102 aaKnown RBP15.5■□□□□ 0.07
CHD4-210ENST00000544040 KANSL3Q9P2N6 904 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 CBFA2T3O75081 653 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 SLC26A2P50443 739 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 CLCN5P51795 746 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 OTOP1Q7RTM1 612 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 CLPTM1LQ96KA5 538 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 SNX15Q9NRS6 342 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 ARL8BQ9NVJ2 186 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 DDX3YO15523 660 aaKnown RBP15.49■□□□□ 0.07
CHD4-210ENST00000544040 RPL9P32969 192 aaKnown RBP15.49■□□□□ 0.07
CHD4-210ENST00000544040 MTHFRP42898 656 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 SEC23AQ15436 765 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 GPR180Q86V85 440 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 EIF1ADQ8N9N8 165 aaKnown RBP15.49■□□□□ 0.07
CHD4-210ENST00000544040 BORCS5Q969J3 196 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 LENG9Q96B70 501 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 ART5Q96L15 291 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 FERD3LQ96RJ6 166 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 C12orf4Q9NQ89 552 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 ADAM28Q9UKQ2 775 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 RGL2O15211 777 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 THOP1P52888 689 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 RAB2AP61019 212 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 WNT8BQ93098 351 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 SNRNP25Q9BV90 132 aaKnown RBP15.49■□□□□ 0.07
CHD4-210ENST00000544040 CDADC1Q9BWV3 514 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 SLC17A7Q9P2U7 560 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 TSPOAP1O95153 1857 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 PXDNLA1KZ92 1463 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 MAP2K7O14733 419 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 SLC6A2P23975 617 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 CTSKP43235 329 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 SKP1P63208 163 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 BTG3Q14201 252 aaPredicted RBP15.49■□□□□ 0.07
CHD4-210ENST00000544040 DLG2Q15700 870 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.49■□□□□ 0.077e-7■■■■■ 46.1
CHD4-210ENST00000544040 GLIS3Q8NEA6 775 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 LINGO1Q96FE5 620 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 CEP295NLQ96MC4 621 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 EQTNQ9NQ60 294 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 EML1O00423 815 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 SMIM11AP58511 58 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 GMFBP60983 142 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 WSCD1Q658N2 575 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 PTCD2Q8WV60 388 aaKnown RBP15.49■□□□□ 0.07
CHD4-210ENST00000544040 SUSD6Q92537 303 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 ART4Q93070 314 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 C11orf24Q96F05 449 aaPredicted RBP15.49■□□□□ 0.07
CHD4-210ENST00000544040 ACE2Q9BYF1 805 aaPredicted RBP15.49■□□□□ 0.07
CHD4-210ENST00000544040 BRD9Q9H8M2 597 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 RAPGEFL1Q9UHV5 662 aa15.49■□□□□ 0.07
CHD4-210ENST00000544040 CORO1CQ9ULV4 474 aaPredicted RBP15.49■□□□□ 0.07
CHD4-210ENST00000544040 A0A075B6Q4 140 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 TBC1D3BA6NDS4 549 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 LRIG2O94898 1065 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 CLK3P49761 638 aaKnown RBP15.48■□□□□ 0.07
CHD4-210ENST00000544040 ESRP1Q6NXG1 681 aaKnown RBP15.48■□□□□ 0.07
CHD4-210ENST00000544040 RALGPS2Q86X27 583 aaPredicted RBP15.48■□□□□ 0.07
CHD4-210ENST00000544040 PCSK9Q8NBP7 692 aaKnown RBP15.48■□□□□ 0.07
CHD4-210ENST00000544040 OR10G6Q8NH81 332 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 LNX1Q8TBB1 728 aaPredicted RBP15.48■□□□□ 0.07
CHD4-210ENST00000544040 CSGALNACT1Q8TDX6 532 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 CNOT6Q9ULM6 557 aaKnown RBP15.48■□□□□ 0.07
CHD4-210ENST00000544040 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.48■□□□□ 0.075e-9■□□□□ 8.2
CHD4-210ENST00000544040 TMX2Q9Y320 296 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 ACTL7BQ9Y614 415 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 TBL1XO60907 577 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 GOT1P17174 413 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 ADAM17P78536 824 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 STYK1Q6J9G0 422 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 CRTC3Q6UUV7 619 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 RGL4Q8IZJ4 473 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 SIPA1Q96FS4 1042 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 RTFDC1Q9BY42 306 aaPredicted RBP15.48■□□□□ 0.07
CHD4-210ENST00000544040 GSAPA4D1B5 854 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 PRKAR2AP13861 404 aaKnown RBP15.48■□□□□ 0.07
CHD4-210ENST00000544040 CDH13P55290 713 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 AMPD2Q01433 879 aa15.48■□□□□ 0.07
CHD4-210ENST00000544040 ELAVL2Q12926 359 aaKnown RBP15.48■□□□□ 0.07
CHD4-210ENST00000544040 PHF12Q96QT6 1004 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms