RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 WRAP53Q9BUR4 548 aaKnown RBP14.55□□□□□ -0.08
TNFRSF1A-216ENST00000543995 LRRC40Q9H9A6 602 aa14.55□□□□□ -0.08
TNFRSF1A-216ENST00000543995 B4GALT6Q9UBX8 382 aa14.55□□□□□ -0.08
TNFRSF1A-216ENST00000543995 ASIC3Q9UHC3 531 aa14.55□□□□□ -0.08
TNFRSF1A-216ENST00000543995 LOC285095A0A1B0GVY8 99 aa14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 NPIPB15A6NHN6 443 aaPredicted RBP14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 ERI2A8K979 691 aaKnown RBP14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 MEI4A8MW99 385 aa14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 SPINT1O43278 529 aa14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 AP2A1O95782 977 aa14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 APRTP07741 180 aa14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 HLA-DPA1P20036 260 aa14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 MAT2AP31153 395 aaKnown RBP14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 HNF1BP35680 557 aa14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 MMP12P39900 470 aa14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 PTGIRP43119 386 aa14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 CHRNA4P43681 627 aa14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 DHPSP49366 369 aaPredicted RBP14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 RPS21P63220 83 aaKnown RBP14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 OLIG2Q13516 323 aa14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 SEMA5AQ13591 1074 aa14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 SLC1A5Q15758 541 aa14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 LPAL2Q16609 132 aa14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 QPCTQ16769 361 aa14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 PLK5Q496M5 336 aa14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 PMS2CLQ68D20 193 aa14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 NAPEPLDQ6IQ20 393 aa14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 NEK5Q6P3R8 708 aa14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 DPPA4Q7L190 304 aa14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 ZNF572Q7Z3I7 529 aaPredicted RBP14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 MNS1Q8NEH6 495 aa14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 CCHCR1Q8TD31 782 aa14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 FOXJ1Q92949 421 aa14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 SCRN2Q96FV2 425 aa14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 HSPA12BQ96MM6 686 aa14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 PCED1AQ9H1Q7 454 aa14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 DUSP15Q9H1R2 295 aaPredicted RBP14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 RAB23Q9ULC3 237 aa14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 PPIL1Q9Y3C6 166 aa14.54□□□□□ -0.08
TNFRSF1A-216ENST00000543995 TRPM6Q9BX84 2022 aa14.53□□□□□ -0.08
TNFRSF1A-216ENST00000543995 A0A1W2PQU0 124 aa14.53□□□□□ -0.08
TNFRSF1A-216ENST00000543995 CAPN8A6NHC0 703 aa14.53□□□□□ -0.08
TNFRSF1A-216ENST00000543995 TTI1O43156 1089 aa14.53□□□□□ -0.08
TNFRSF1A-216ENST00000543995 MMP20O60882 483 aa14.53□□□□□ -0.08
TNFRSF1A-216ENST00000543995 USP12O75317 370 aa14.53□□□□□ -0.08
TNFRSF1A-216ENST00000543995 FGF1P05230 155 aa14.53□□□□□ -0.08
TNFRSF1A-216ENST00000543995 ELFN1P0C7U0 828 aa14.53□□□□□ -0.08
TNFRSF1A-216ENST00000543995 VIPR1P32241 457 aa14.53□□□□□ -0.08
TNFRSF1A-216ENST00000543995 ADCY8P40145 1251 aa14.53□□□□□ -0.08
TNFRSF1A-216ENST00000543995 PPP2CBP62714 309 aa14.53□□□□□ -0.08
TNFRSF1A-216ENST00000543995 PPP2CAP67775 309 aa14.53□□□□□ -0.08
TNFRSF1A-216ENST00000543995 DHX34Q14147 1143 aaKnown RBP14.53□□□□□ -0.08
TNFRSF1A-216ENST00000543995 PTPRRQ15256 657 aa14.53□□□□□ -0.08
TNFRSF1A-216ENST00000543995 TMEM52BQ4KMG9 183 aa14.53□□□□□ -0.08
TNFRSF1A-216ENST00000543995 SIRPB2Q5JXA9 342 aa14.53□□□□□ -0.08
TNFRSF1A-216ENST00000543995 SEL1L3Q68CR1 1132 aa14.53□□□□□ -0.08
TNFRSF1A-216ENST00000543995 DENND2CQ68D51 928 aa14.53□□□□□ -0.08
TNFRSF1A-216ENST00000543995 KCTD11Q693B1 232 aa14.53□□□□□ -0.08
TNFRSF1A-216ENST00000543995 KIAA1161Q6NSJ0 714 aa14.53□□□□□ -0.08
TNFRSF1A-216ENST00000543995 SYDE1Q6ZW31 735 aaPredicted RBP14.53□□□□□ -0.08
TNFRSF1A-216ENST00000543995 LINC00523Q86TU6 105 aa14.53□□□□□ -0.08
TNFRSF1A-216ENST00000543995 TRIM69Q86WT6 500 aa14.53□□□□□ -0.08
TNFRSF1A-216ENST00000543995 HORMAD1Q86X24 394 aa14.53□□□□□ -0.08
TNFRSF1A-216ENST00000543995 BIRC7Q96CA5 298 aa14.53□□□□□ -0.08
TNFRSF1A-216ENST00000543995 ZC3H10Q96K80 434 aaKnown RBP14.53□□□□□ -0.08
TNFRSF1A-216ENST00000543995 SMIM14Q96QK8 99 aa14.53□□□□□ -0.08
TNFRSF1A-216ENST00000543995 MCCC1Q96RQ3 725 aaPredicted RBP14.53□□□□□ -0.08
TNFRSF1A-216ENST00000543995 FAM86C1Q9NVL1 165 aa14.53□□□□□ -0.08
TNFRSF1A-216ENST00000543995 ZFR2Q9UPR6 939 aaKnown RBP14.53□□□□□ -0.08
TNFRSF1A-216ENST00000543995 NEU2Q9Y3R4 380 aa14.53□□□□□ -0.08
TNFRSF1A-216ENST00000543995 LRRK1Q38SD2 2015 aa14.53□□□□□ -0.08
TNFRSF1A-216ENST00000543995 SPAG17Q6Q759 2223 aa14.53□□□□□ -0.08
TNFRSF1A-216ENST00000543995 DOCK9Q9BZ29 2069 aa14.52□□□□□ -0.08
TNFRSF1A-216ENST00000543995 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.52□□□□□ -0.08
TNFRSF1A-216ENST00000543995 CTAGE15A4D2H0 777 aa14.52□□□□□ -0.08
TNFRSF1A-216ENST00000543995 METTL12A8MUP2 240 aa14.52□□□□□ -0.08
TNFRSF1A-216ENST00000543995 TM7SF2O76062 418 aa14.52□□□□□ -0.08
TNFRSF1A-216ENST00000543995 ATXN1LP0C7T5 689 aaKnown RBP14.52□□□□□ -0.08
TNFRSF1A-216ENST00000543995 PIRTP0C851 137 aa14.52□□□□□ -0.08
TNFRSF1A-216ENST00000543995 CTAGE8P0CG41 777 aa14.52□□□□□ -0.08
TNFRSF1A-216ENST00000543995 ADRA1AP35348 466 aa14.52□□□□□ -0.08
TNFRSF1A-216ENST00000543995 PTGER3P43115 390 aa14.52□□□□□ -0.08
TNFRSF1A-216ENST00000543995 LIG3P49916 1009 aa14.52□□□□□ -0.08
TNFRSF1A-216ENST00000543995 CCR5P51681 352 aa14.52□□□□□ -0.08
TNFRSF1A-216ENST00000543995 RALGDSQ12967 914 aa14.52□□□□□ -0.08
TNFRSF1A-216ENST00000543995 SGCGQ13326 291 aa14.52□□□□□ -0.08
TNFRSF1A-216ENST00000543995 PTK6Q13882 451 aa14.52□□□□□ -0.08
TNFRSF1A-216ENST00000543995 SPDYCQ5MJ68 293 aa14.52□□□□□ -0.08
TNFRSF1A-216ENST00000543995 LYSMD4Q5XG99 296 aa14.52□□□□□ -0.08
TNFRSF1A-216ENST00000543995 PPP1R21Q6ZMI0 780 aa14.52□□□□□ -0.08
TNFRSF1A-216ENST00000543995 MAATS1Q7Z4T9 603 aa14.52□□□□□ -0.08
TNFRSF1A-216ENST00000543995 CTAGE6Q86UF2 777 aa14.52□□□□□ -0.08
TNFRSF1A-216ENST00000543995 JAMLQ86YT9 394 aa14.52□□□□□ -0.08
TNFRSF1A-216ENST00000543995 SLC41A1Q8IVJ1 513 aa14.52□□□□□ -0.08
TNFRSF1A-216ENST00000543995 CTAGE4Q8IX94 777 aa14.52□□□□□ -0.08
TNFRSF1A-216ENST00000543995 KLHDC8BQ8IXV7 354 aa14.52□□□□□ -0.08
TNFRSF1A-216ENST00000543995 RGL4Q8IZJ4 473 aa14.52□□□□□ -0.08
TNFRSF1A-216ENST00000543995 CEP112Q8N8E3 955 aa14.52□□□□□ -0.08
TNFRSF1A-216ENST00000543995 KLK6Q92876 244 aa14.52□□□□□ -0.08
TNFRSF1A-216ENST00000543995 TPX2Q9ULW0 747 aaKnown RBP14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms