RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 USP10Q14694 798 aaKnown RBP19.9■□□□□ 0.78
COPS7A-218ENST00000543939 C16orf46Q6P387 395 aa19.9■□□□□ 0.78
COPS7A-218ENST00000543939 CNSTQ6PJW8 725 aa19.9■□□□□ 0.78
COPS7A-218ENST00000543939 KIAA0907Q7Z7F0 614 aaPredicted RBP19.9■□□□□ 0.78
COPS7A-218ENST00000543939 SPATS2Q86XZ4 545 aaKnown RBP19.9■□□□□ 0.78
COPS7A-218ENST00000543939 NPAS3Q8IXF0 933 aa19.9■□□□□ 0.78
COPS7A-218ENST00000543939 CCDC197Q8NCU1 140 aa19.9■□□□□ 0.78
COPS7A-218ENST00000543939 GPR150Q8NGU9 434 aa19.9■□□□□ 0.78
COPS7A-218ENST00000543939 ISG20Q96AZ6 181 aaKnown RBP19.9■□□□□ 0.78
COPS7A-218ENST00000543939 GRAMD1AQ96CP6 724 aa19.9■□□□□ 0.78
COPS7A-218ENST00000543939 RPL10LQ96L21 214 aaKnown RBP19.9■□□□□ 0.78
COPS7A-218ENST00000543939 SUDS3Q9H7L9 328 aaPredicted RBP19.9■□□□□ 0.78
COPS7A-218ENST00000543939 MARCH4Q9P2E8 410 aaPredicted RBP19.9■□□□□ 0.78
COPS7A-218ENST00000543939 PHTF1Q9UMS5 762 aa19.9■□□□□ 0.78
COPS7A-218ENST00000543939 TRANK1O15050 2925 aa19.9■□□□□ 0.78
COPS7A-218ENST00000543939 BIRC5O15392 142 aa19.9■□□□□ 0.78
COPS7A-218ENST00000543939 IGSF6O95976 241 aa19.9■□□□□ 0.78
COPS7A-218ENST00000543939 GSRP00390 522 aa19.9■□□□□ 0.78
COPS7A-218ENST00000543939 GOT2P00505 430 aaKnown RBP19.9■□□□□ 0.78
COPS7A-218ENST00000543939 BPGMP07738 259 aa19.9■□□□□ 0.78
COPS7A-218ENST00000543939 BGNP21810 368 aa19.9■□□□□ 0.78
COPS7A-218ENST00000543939 ZNF789Q5FWF6 425 aa19.9■□□□□ 0.78
COPS7A-218ENST00000543939 ARMC12Q5T9G4 340 aa19.9■□□□□ 0.78
COPS7A-218ENST00000543939 C6orf89Q6UWU4 347 aa19.9■□□□□ 0.78
COPS7A-218ENST00000543939 CAMK1DQ8IU85 385 aa19.9■□□□□ 0.78
COPS7A-218ENST00000543939 SLC41A1Q8IVJ1 513 aa19.9■□□□□ 0.78
COPS7A-218ENST00000543939 PLD6Q8N2A8 252 aaKnown RBP19.9■□□□□ 0.78
COPS7A-218ENST00000543939 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.9■□□□□ 0.78
COPS7A-218ENST00000543939 OR2AP1Q8NGE2 309 aa19.9■□□□□ 0.78
COPS7A-218ENST00000543939 OR6K2Q8NGY2 324 aa19.9■□□□□ 0.78
COPS7A-218ENST00000543939 MYO19Q96H55 970 aa19.9■□□□□ 0.78
COPS7A-218ENST00000543939 CDKN2AIPNLQ96HQ2 116 aa19.9■□□□□ 0.78
COPS7A-218ENST00000543939 SLC2A11Q9BYW1 496 aa19.9■□□□□ 0.78
COPS7A-218ENST00000543939 TNKS2Q9H2K2 1166 aa19.9■□□□□ 0.78
COPS7A-218ENST00000543939 HACD3Q9P035 362 aa19.9■□□□□ 0.78
COPS7A-218ENST00000543939 TMEM216Q9P0N5 145 aa19.9■□□□□ 0.78
COPS7A-218ENST00000543939 SIRPGQ9P1W8 387 aa19.9■□□□□ 0.78
COPS7A-218ENST00000543939 ANKRD6Q9Y2G4 727 aa19.9■□□□□ 0.78
COPS7A-218ENST00000543939 STARD13Q9Y3M8 1113 aa19.9■□□□□ 0.78
COPS7A-218ENST00000543939 PCDHB9Q9Y5E1 797 aa19.9■□□□□ 0.78
COPS7A-218ENST00000543939 C2orf81A6NN90 581 aa19.89■□□□□ 0.77
COPS7A-218ENST00000543939 TRAFD1O14545 582 aaPredicted RBP19.89■□□□□ 0.77
COPS7A-218ENST00000543939 KLF11O14901 512 aa19.89■□□□□ 0.77
COPS7A-218ENST00000543939 HTRA2O43464 458 aaPredicted RBP19.89■□□□□ 0.77
COPS7A-218ENST00000543939 S1PR4O95977 384 aa19.89■□□□□ 0.77
COPS7A-218ENST00000543939 PROCP04070 461 aa19.89■□□□□ 0.77
COPS7A-218ENST00000543939 GRIA4P48058 902 aa19.89■□□□□ 0.77
COPS7A-218ENST00000543939 IRF9Q00978 393 aa19.89■□□□□ 0.77
COPS7A-218ENST00000543939 SULT2A1Q06520 285 aa19.89■□□□□ 0.77
COPS7A-218ENST00000543939 ITIH4Q14624 930 aa19.89■□□□□ 0.77
COPS7A-218ENST00000543939 DHCR24Q15392 516 aa19.89■□□□□ 0.77
COPS7A-218ENST00000543939 RARS2Q5T160 578 aaKnown RBP19.89■□□□□ 0.77
COPS7A-218ENST00000543939 SPATA21Q7Z572 469 aa19.89■□□□□ 0.77
COPS7A-218ENST00000543939 ADIPOR2Q86V24 386 aa19.89■□□□□ 0.77
COPS7A-218ENST00000543939 TRIM42Q8IWZ5 723 aa19.89■□□□□ 0.77
COPS7A-218ENST00000543939 TTC30BQ8N4P2 665 aa19.89■□□□□ 0.77
COPS7A-218ENST00000543939 OTUD6BQ8N6M0 293 aa19.89■□□□□ 0.77
COPS7A-218ENST00000543939 OR4K2Q8NGD2 314 aa19.89■□□□□ 0.77
COPS7A-218ENST00000543939 PIH1D2Q8WWB5 315 aa19.89■□□□□ 0.77
COPS7A-218ENST00000543939 MRPL38Q96DV4 380 aaKnown RBP19.89■□□□□ 0.77
COPS7A-218ENST00000543939 MECRQ9BV79 373 aa19.89■□□□□ 0.77
COPS7A-218ENST00000543939 DUS2Q9NX74 493 aaKnown RBP19.89■□□□□ 0.77
COPS7A-218ENST00000543939 SLC25A13Q9UJS0 675 aa19.89■□□□□ 0.77
COPS7A-218ENST00000543939 USP15Q9Y4E8 981 aaPredicted RBP19.89■□□□□ 0.77
COPS7A-218ENST00000543939 RFXAPO00287 272 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 SOCS5O75159 536 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 GLP2RO95838 553 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 LPOP22079 712 aaPredicted RBP19.88■□□□□ 0.77
COPS7A-218ENST00000543939 FSHRP23945 695 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 VIPR2P41587 438 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 ABL2P42684 1182 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 CLCN5P51795 746 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 RPL26P61254 145 aaKnown RBP19.88■□□□□ 0.77
COPS7A-218ENST00000543939 BCL2L1Q07817 233 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 SF3A3Q12874 501 aaKnown RBP eCLIP19.88■□□□□ 0.77
COPS7A-218ENST00000543939 DBN1Q16643 649 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 FAM78AQ5JUQ0 283 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 C22orf39Q6P5X5 142 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 OR4L1Q8NH43 312 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 OSCP1Q8WVF1 389 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 VOPP1Q96AW1 172 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 ELMO2Q96JJ3 720 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 CEP44Q9C0F1 390 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 IGFLR1Q9H665 355 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 ZNF358Q9NW07 568 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 FBXO10Q9UK96 956 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 RPL26L1Q9UNX3 145 aaKnown RBP19.88■□□□□ 0.77
COPS7A-218ENST00000543939 CCDC85CA6NKD9 419 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 CD3EAPO15446 510 aaKnown RBP19.88■□□□□ 0.77
COPS7A-218ENST00000543939 PHGDHO43175 533 aaKnown RBP19.88■□□□□ 0.77
COPS7A-218ENST00000543939 PIGNO95427 931 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 CYP17A1P05093 508 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 SLC35E2BP0CK96 405 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 NEFHP12036 1026 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 SAT1P21673 171 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 GKP32189 559 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 EPHB1P54762 984 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 RAB10P61026 200 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 SNRPD1P62314 119 aaKnown RBP19.88■□□□□ 0.77
COPS7A-218ENST00000543939 ECT2LQ008S8 904 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms