RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 ANKS1BQ7Z6G8 1248 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 AUTS2Q8WXX7 1259 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 P2RY11Q96G91 374 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 APOPT1Q96IL0 206 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 SHDQ96IW2 340 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 FAIM2Q9BWQ8 316 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 EIF2B3Q9NR50 452 aaKnown RBP6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 YIPF1Q9Y548 306 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 CHD2O14647 1828 aaKnown RBP6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 SERPINI2O75830 405 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 VIPP01282 170 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 IDSP22304 550 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 MAPK3P27361 379 aaPredicted RBP6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 TRIP4Q15650 581 aaPredicted RBP6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 TMEM63BQ5T3F8 832 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 IL27RAQ6UWB1 636 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 C7orf43Q8WVR3 580 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 NDRG1Q92597 394 aaKnown RBP6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 CLIP3Q96DZ5 547 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 IL12RB2Q99665 862 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 MAGEH1Q9H213 219 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 DPEP3Q9H4B8 488 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 POMKQ9H5K3 350 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 CAAP1Q9H8G2 361 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 GLOD4Q9HC38 313 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 LUZP4Q9P127 313 aa6.93□□□□□ -1.3
SRGAP1-206ENST00000543397 IRS2Q9Y4H2 1338 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 ADAMTSL3P82987 1691 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 KCNU1A8MYU2 1149 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 ITGAVP06756 1048 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 ENO2P09104 434 aaPredicted RBP6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 GDI1P31150 447 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 AAK1Q2M2I8 961 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 LINGO4Q6UY18 593 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 ZYG11AQ6WRX3 759 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 XYLT1Q86Y38 959 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 LRRC34Q8IZ02 419 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 OR4L1Q8NH43 312 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 HDAC10Q969S8 669 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 TRMT61BQ9BVS5 477 aaKnown RBP6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 SEMA4BQ9NPR2 832 aaPredicted RBP6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 TUBA8Q9NY65 449 aaPredicted RBP6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 SCN3BQ9NY72 215 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 N6AMT1Q9Y5N5 214 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 GMFGO60234 142 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 OR10H2O60403 315 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 POP4O95707 220 aaKnown RBP6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 FOSL2P15408 326 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 GNSP15586 552 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 HNF4AP41235 474 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 FAAP100Q0VG06 881 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 COL9A3Q14050 684 aaPredicted RBP6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 CBX2Q14781 532 aaPredicted RBP6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 DAB2IPQ5VWQ8 1189 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 PAGE2Q7Z2X7 111 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 SLC4A11Q8NBS3 891 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 TSTD1Q8NFU3 115 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 TCP10LQ8TDR4 215 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 SH3RF2Q8TEC5 729 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 AP2M1Q96CW1 435 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 B3GALT6Q96L58 329 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 CSPG4P5Q96PW8 444 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 PRRG3Q9BZD7 231 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 ROGDIQ9GZN7 287 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 EXO5Q9H790 373 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 FBXO5Q9UKT4 447 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 MRPS33Q9Y291 106 aaKnown RBP6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 TBC1D30Q9Y2I9 924 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 ZFP37Q9Y6Q3 630 aaPredicted RBP6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 AFDNP55196 1824 aaKnown RBP6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 C5orf60A6NFR6 353 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 VPS4BO75351 444 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 ATG7O95352 703 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 TGDSO95455 350 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 ALBP02768 609 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 ETS1P14921 441 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 UQCRBP14927 111 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 SLC1A6P48664 564 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 MAPKAPK2P49137 400 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 DAOAP59103 153 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 SLC20A2Q08357 652 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 USP4Q13107 963 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 AADACL2Q6P093 401 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 DNAJC14Q6Y2X3 702 aaPredicted RBP6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 BNC2Q6ZN30 1099 aaPredicted RBP6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 TAC4Q86UU9 113 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 ALLCQ8N6M5 410 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 ZNF398Q8TD17 642 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 ASZ1Q8WWH4 475 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 TRIB2Q92519 343 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 TEPSINQ96N21 525 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 HEPHQ9BQS7 1158 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 RETREG1Q9H6L5 497 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 TMCO1Q9UM00 188 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 RAI2Q9Y5P3 530 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 LMO2P25791 158 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 S100A3P33764 101 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 NRIP1P48552 1158 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 TAS2R40P59535 323 aa6.92□□□□□ -1.3
SRGAP1-206ENST00000543397 PDGFRLQ15198 375 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms