RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 STRADBQ9C0K7 418 aa11.94□□□□□ -0.5
PTPN6-219ENST00000542848 NAT10Q9H0A0 1025 aaKnown RBP11.94□□□□□ -0.5
PTPN6-219ENST00000542848 SEPT11Q9NVA2 429 aaKnown RBP11.94□□□□□ -0.5
PTPN6-219ENST00000542848 KLQ9UEF7 1012 aa11.94□□□□□ -0.5
PTPN6-219ENST00000542848 ATP8A1Q9Y2Q0 1164 aa11.94□□□□□ -0.5
PTPN6-219ENST00000542848 OR1A2Q9Y585 309 aa11.94□□□□□ -0.5
PTPN6-219ENST00000542848 PCDHGA7Q9Y5G6 932 aa11.94□□□□□ -0.5
PTPN6-219ENST00000542848 MYO18BQ8IUG5 2567 aa11.94□□□□□ -0.5
PTPN6-219ENST00000542848 BOD1L1Q8NFC6 3051 aa11.93□□□□□ -0.5
PTPN6-219ENST00000542848 PMS2P1A4D2B8 440 aa11.93□□□□□ -0.5
PTPN6-219ENST00000542848 LGALS16A8MUM7 142 aa11.93□□□□□ -0.5
PTPN6-219ENST00000542848 PLD2O14939 933 aa11.93□□□□□ -0.5
PTPN6-219ENST00000542848 PALMO75781 387 aa11.93□□□□□ -0.5
PTPN6-219ENST00000542848 HOXC4P09017 264 aaPredicted RBP11.93□□□□□ -0.5
PTPN6-219ENST00000542848 FERP16591 822 aa11.93□□□□□ -0.5
PTPN6-219ENST00000542848 SERPINA4P29622 427 aa11.93□□□□□ -0.5
PTPN6-219ENST00000542848 PAPOLAP51003 745 aaKnown RBP11.93□□□□□ -0.5
PTPN6-219ENST00000542848 POLR2LP62875 67 aaKnown RBP11.93□□□□□ -0.5
PTPN6-219ENST00000542848 CCL7P80098 99 aa11.93□□□□□ -0.5
PTPN6-219ENST00000542848 UBXN1Q04323 297 aa11.93□□□□□ -0.5
PTPN6-219ENST00000542848 NSUN2Q08J23 767 aaKnown RBP eCLIP11.93□□□□□ -0.5
PTPN6-219ENST00000542848 CLN3Q13286 438 aa11.93□□□□□ -0.5
PTPN6-219ENST00000542848 OGFOD3Q6PK18 319 aa11.93□□□□□ -0.5
PTPN6-219ENST00000542848 RAB11FIP2Q7L804 512 aa11.93□□□□□ -0.5
PTPN6-219ENST00000542848 ZSWIM9Q86XI8 627 aa11.93□□□□□ -0.5
PTPN6-219ENST00000542848 CAMK1DQ8IU85 385 aa11.93□□□□□ -0.5
PTPN6-219ENST00000542848 MCOLN2Q8IZK6 566 aa11.93□□□□□ -0.5
PTPN6-219ENST00000542848 GPR156Q8NFN8 814 aa11.93□□□□□ -0.5
PTPN6-219ENST00000542848 TMEM74Q96NL1 305 aa11.93□□□□□ -0.5
PTPN6-219ENST00000542848 FUCA2Q9BTY2 467 aa11.93□□□□□ -0.5
PTPN6-219ENST00000542848 SLC39A8Q9C0K1 460 aa11.93□□□□□ -0.5
PTPN6-219ENST00000542848 LRRN3Q9H3W5 708 aa11.93□□□□□ -0.5
PTPN6-219ENST00000542848 ATP13A3Q9H7F0 1226 aa11.93□□□□□ -0.5
PTPN6-219ENST00000542848 SYNDIG1Q9H7V2 258 aa11.93□□□□□ -0.5
PTPN6-219ENST00000542848 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.93□□□□□ -0.5
PTPN6-219ENST00000542848 SIRPGQ9P1W8 387 aa11.93□□□□□ -0.5
PTPN6-219ENST00000542848 RABGEF1Q9UJ41 708 aa11.93□□□□□ -0.5
PTPN6-219ENST00000542848 APPL1Q9UKG1 709 aa11.93□□□□□ -0.5
PTPN6-219ENST00000542848 A0A1W2PQM1 296 aa11.92□□□□□ -0.5
PTPN6-219ENST00000542848 D6RAR5 112 aa11.92□□□□□ -0.5
PTPN6-219ENST00000542848 J3QKU1 62 aa11.92□□□□□ -0.5
PTPN6-219ENST00000542848 CACNB4O00305 520 aaPredicted RBP11.92□□□□□ -0.5
PTPN6-219ENST00000542848 EEF2KO00418 725 aaKnown RBP11.92□□□□□ -0.5
PTPN6-219ENST00000542848 TNFRSF10CO14798 259 aa11.92□□□□□ -0.5
PTPN6-219ENST00000542848 PCCBP05166 539 aa11.92□□□□□ -0.5
PTPN6-219ENST00000542848 RPLP0P05388 317 aaKnown RBP11.92□□□□□ -0.5
PTPN6-219ENST00000542848 PNLIPP16233 465 aa11.92□□□□□ -0.5
PTPN6-219ENST00000542848 GLB1P16278 677 aa11.92□□□□□ -0.5
PTPN6-219ENST00000542848 CDK11BP21127 795 aaKnown RBP11.92□□□□□ -0.5
PTPN6-219ENST00000542848 KELP23276 732 aa11.92□□□□□ -0.5
PTPN6-219ENST00000542848 SLC5A2P31639 672 aa11.92□□□□□ -0.5
PTPN6-219ENST00000542848 CCKBRP32239 447 aa11.92□□□□□ -0.5
PTPN6-219ENST00000542848 UGT1A5P35504 534 aa11.92□□□□□ -0.5
PTPN6-219ENST00000542848 TRIM23P36406 574 aa11.92□□□□□ -0.5
PTPN6-219ENST00000542848 INHBCP55103 352 aa11.92□□□□□ -0.5
PTPN6-219ENST00000542848 KIAA1024LP59773 190 aa11.92□□□□□ -0.5
PTPN6-219ENST00000542848 OGDHQ02218 1023 aa11.92□□□□□ -0.5
PTPN6-219ENST00000542848 BCL2L1Q07817 233 aa11.92□□□□□ -0.5
PTPN6-219ENST00000542848 LY6DQ14210 128 aa11.92□□□□□ -0.5
PTPN6-219ENST00000542848 RFTN1Q14699 578 aaPredicted RBP11.92□□□□□ -0.5
PTPN6-219ENST00000542848 ERMARDQ5T6L9 678 aa11.92□□□□□ -0.5
PTPN6-219ENST00000542848 AFMIDQ63HM1 303 aa11.92□□□□□ -0.5
PTPN6-219ENST00000542848 LIPIQ6XZB0 460 aa11.92□□□□□ -0.5
PTPN6-219ENST00000542848 B3GNT8Q7Z7M8 397 aa11.92□□□□□ -0.5
PTPN6-219ENST00000542848 PLA2G15Q8NCC3 412 aa11.92□□□□□ -0.5
PTPN6-219ENST00000542848 TSEN2Q8NCE0 465 aaKnown RBP11.92□□□□□ -0.5
PTPN6-219ENST00000542848 OR56A4Q8NGH8 313 aa11.92□□□□□ -0.5
PTPN6-219ENST00000542848 ANP32BQ92688 251 aaKnown RBP11.92□□□□□ -0.5
PTPN6-219ENST00000542848 FUBP1Q96AE4 644 aaKnown RBP11.92□□□□□ -0.5
PTPN6-219ENST00000542848 ECHDC3Q96DC8 303 aa11.92□□□□□ -0.5
PTPN6-219ENST00000542848 MED8Q96G25 268 aa11.92□□□□□ -0.5
PTPN6-219ENST00000542848 CELF6Q96J87 481 aaKnown RBP11.92□□□□□ -0.5
PTPN6-219ENST00000542848 CCNL2Q96S94 520 aaPredicted RBP11.92□□□□□ -0.5
PTPN6-219ENST00000542848 GRPEL1Q9HAV7 217 aa11.92□□□□□ -0.5
PTPN6-219ENST00000542848 EPB41L5Q9HCM4 733 aa11.92□□□□□ -0.5
PTPN6-219ENST00000542848 PARVAQ9NVD7 372 aa11.92□□□□□ -0.5
PTPN6-219ENST00000542848 ACSL6Q9UKU0 697 aa11.92□□□□□ -0.5
PTPN6-219ENST00000542848 ATXN7L1Q9ULK2 861 aaPredicted RBP11.92□□□□□ -0.5
PTPN6-219ENST00000542848 AP4E1Q9UPM8 1137 aa11.92□□□□□ -0.5
PTPN6-219ENST00000542848 SDK2Q58EX2 2172 aa11.91□□□□□ -0.5
PTPN6-219ENST00000542848 TMEM202A6NGA9 273 aa11.91□□□□□ -0.5
PTPN6-219ENST00000542848 B8ZZF3 427 aa11.91□□□□□ -0.5
PTPN6-219ENST00000542848 DAPK3O43293 454 aa11.91□□□□□ -0.5
PTPN6-219ENST00000542848 RECQL5O94762 991 aaPredicted RBP11.91□□□□□ -0.5
PTPN6-219ENST00000542848 ELFN1P0C7U0 828 aa11.91□□□□□ -0.5
PTPN6-219ENST00000542848 TNFAIP3P21580 790 aa11.91□□□□□ -0.5
PTPN6-219ENST00000542848 RGRP47804 291 aa11.91□□□□□ -0.5
PTPN6-219ENST00000542848 RENBPP51606 427 aa11.91□□□□□ -0.5
PTPN6-219ENST00000542848 ZNF135P52742 658 aaPredicted RBP11.91□□□□□ -0.5
PTPN6-219ENST00000542848 MYL5Q02045 173 aa11.91□□□□□ -0.5
PTPN6-219ENST00000542848 RALGDSQ12967 914 aa11.91□□□□□ -0.5
PTPN6-219ENST00000542848 MAMLD1Q13495 774 aa11.91□□□□□ -0.5
PTPN6-219ENST00000542848 TCEA2Q15560 299 aa11.91□□□□□ -0.5
PTPN6-219ENST00000542848 KIAA1614Q5VZ46 1190 aa11.91□□□□□ -0.5
PTPN6-219ENST00000542848 NYAP1Q6ZVC0 841 aa11.91□□□□□ -0.5
PTPN6-219ENST00000542848 DPPA4Q7L190 304 aa11.91□□□□□ -0.5
PTPN6-219ENST00000542848 IRF2BP2Q7Z5L9 587 aa11.91□□□□□ -0.5
PTPN6-219ENST00000542848 TAF8Q7Z7C8 310 aa11.91□□□□□ -0.5
PTPN6-219ENST00000542848 CCNJLQ8IV13 435 aa11.91□□□□□ -0.5
PTPN6-219ENST00000542848 FAM46DQ8NEK8 389 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms