RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 ZW10O43264 779 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 LRRTM2O43300 516 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 TSPAN6O43657 245 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 TM7SF2O76062 418 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 STK17BO94768 372 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 ADCY5O95622 1261 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 PNLIPP16233 465 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 ITIH2P19823 946 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 F8A1P23610 371 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 HTR1BP28222 390 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 MSX1P28360 303 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 CD1CP29017 333 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 GSTT1P30711 240 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 GKP32189 559 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 PLK1P53350 603 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 LIMK2P53671 638 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 RNASE9P60153 205 aaKnown RBP4.82□□□□□ -1.64
LIMS1-214ENST00000542845 CDK18Q07002 472 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 ABHD18Q0P651 414 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 ALG11Q2TAA5 492 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 KLHL40Q2TBA0 621 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 FAM26FQ5R3K3 315 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 CERCAMQ5T4B2 595 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 SPECC1LQ69YQ0 1117 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 CXorf57Q6NSI4 855 aaKnown RBP4.82□□□□□ -1.64
LIMS1-214ENST00000542845 JMJD6Q6NYC1 403 aaPredicted RBP4.82□□□□□ -1.64
LIMS1-214ENST00000542845 MSANTD2Q6P1R3 559 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 CCDC73Q6ZRK6 1079 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 PARS2Q7L3T8 475 aaKnown RBP4.82□□□□□ -1.64
LIMS1-214ENST00000542845 TTC7BQ86TV6 843 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 XYLT1Q86Y38 959 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 CISD2Q8N5K1 135 aaKnown RBP4.82□□□□□ -1.64
LIMS1-214ENST00000542845 OR6K2Q8NGY2 324 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 CCL4L1Q8NHW4 92 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 TAS1R2Q8TE23 839 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 DQX1Q8TE96 717 aaKnown RBP4.82□□□□□ -1.64
LIMS1-214ENST00000542845 HPS1Q92902 700 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 FAM149B1Q96BN6 582 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 CENPTQ96BT3 561 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 RTP4Q96DX8 246 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 BTN2A3PQ96KV6 586 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 ZSCAN31Q96LW9 406 aaPredicted RBP4.82□□□□□ -1.64
LIMS1-214ENST00000542845 TBATAQ96M53 351 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 SERPINB11Q96P15 392 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 HEPHQ9BQS7 1158 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 SPON2Q9BUD6 331 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 APOOQ9BUR5 198 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 SLC25A23Q9BV35 468 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 DDA1Q9BW61 102 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 TRIM55Q9BYV6 548 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 SIK2Q9H0K1 926 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 APMAPQ9HDC9 416 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 BRD7Q9NPI1 651 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.82□□□□□ -1.64
LIMS1-214ENST00000542845 TMEM9Q9P0T7 183 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 GMPR2Q9P2T1 348 aaKnown RBP4.82□□□□□ -1.64
LIMS1-214ENST00000542845 VANGL2Q9ULK5 521 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 OR1A2Q9Y585 309 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 CLIC4Q9Y696 253 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 RPS6KL1Q9Y6S9 549 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 OTOGQ6ZRI0 2925 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 LRP4O75096 1905 aa4.82□□□□□ -1.64
LIMS1-214ENST00000542845 ANKRD62A6NC57 917 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 ARGFXA6NJG6 315 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 A6NL46 340 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 FIGNL2A6NMB9 653 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 KCNU1A8MYU2 1149 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 F5H423 210 aaPredicted RBP4.81□□□□□ -1.64
LIMS1-214ENST00000542845 KRIT1O00522 736 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 AP1G1O43747 822 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 NUDT21O43809 227 aaKnown RBP4.81□□□□□ -1.64
LIMS1-214ENST00000542845 ZG16O60844 167 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 LRCH4O75427 683 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 CBX6O95503 412 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 BMP15O95972 392 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 CALCAP01258 141 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 PCCBP05166 539 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 RHOCP08134 193 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 TRIM49P0CI25 452 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 TRIM49CP0CI26 452 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 HOXB4P17483 251 aaPredicted RBP4.81□□□□□ -1.64
LIMS1-214ENST00000542845 CASP1P29466 404 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 IRAK1P51617 712 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 VAMP7P51809 220 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 SNRPFP62306 86 aaKnown RBP4.81□□□□□ -1.64
LIMS1-214ENST00000542845 TYRO3Q06418 890 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 HLTFQ14527 1009 aaKnown RBP eCLIP4.81□□□□□ -1.64
LIMS1-214ENST00000542845 INPP5AQ14642 412 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 LRRC14Q15048 493 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 IRF4Q15306 451 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 KNOP1Q1ED39 458 aaKnown RBP4.81□□□□□ -1.64
LIMS1-214ENST00000542845 ZRANB3Q5FWF4 1079 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 SYPL2Q5VXT5 272 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 KCTD16Q68DU8 428 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 ARHGAP17Q68EM7 881 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 ANKRD40Q6AI12 368 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 FBXL22Q6P050 247 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 PMF1Q6P1K2 205 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 C22orf39Q6P5X5 142 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 CEACAM20Q6UY09 585 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms