RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 TREX2Q9BQ50 279 aaPredicted RBP3.71□□□□□ -1.82
LEMD3-204ENST00000542032 NPLQ9BXD5 320 aaPredicted RBP3.71□□□□□ -1.82
LEMD3-204ENST00000542032 C1QTNF4Q9BXJ3 329 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 GAREM1Q9H706 876 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 PLSCR4Q9NRQ2 329 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 TBC1D29Q9UFV1 150 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 KCNG2Q9UJ96 466 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 DNAJC16Q9Y2G8 782 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 RSF1Q96T23 1441 aaPredicted RBP3.7□□□□□ -1.82
LEMD3-204ENST00000542032 A0A087WYN8 130 aa3.7□□□□□ -1.82
LEMD3-204ENST00000542032 PABPN1LA6NDY0 278 aaKnown RBP3.7□□□□□ -1.82
LEMD3-204ENST00000542032 TTC36A6NLP5 189 aa3.7□□□□□ -1.82
LEMD3-204ENST00000542032 F5H0A9 414 aaPredicted RBP3.7□□□□□ -1.82
LEMD3-204ENST00000542032 STX16-NPEPL1H3BU86 382 aa3.7□□□□□ -1.82
LEMD3-204ENST00000542032 CHL1O00533 1208 aa3.7□□□□□ -1.82
LEMD3-204ENST00000542032 STX16O14662 325 aa3.7□□□□□ -1.82
LEMD3-204ENST00000542032 P4HA2O15460 535 aa3.7□□□□□ -1.82
LEMD3-204ENST00000542032 HBP1O60381 514 aa3.7□□□□□ -1.82
LEMD3-204ENST00000542032 CBX6O95503 412 aa3.7□□□□□ -1.82
LEMD3-204ENST00000542032 DNTTP04053 509 aa3.7□□□□□ -1.82
LEMD3-204ENST00000542032 CNPP09543 421 aaKnown RBP3.7□□□□□ -1.82
LEMD3-204ENST00000542032 RXRAP19793 462 aa3.7□□□□□ -1.82
LEMD3-204ENST00000542032 CTNNA1P35221 906 aaKnown RBP3.7□□□□□ -1.82
LEMD3-204ENST00000542032 ACTN2P35609 894 aa3.7□□□□□ -1.82
LEMD3-204ENST00000542032 COMPP49747 757 aaPredicted RBP3.7□□□□□ -1.82
LEMD3-204ENST00000542032 DRG2P55039 364 aaKnown RBP3.7□□□□□ -1.82
LEMD3-204ENST00000542032 EEF1A2Q05639 463 aaKnown RBP3.7□□□□□ -1.82
LEMD3-204ENST00000542032 CHRNDQ07001 517 aa3.7□□□□□ -1.82
LEMD3-204ENST00000542032 SLC12A1Q13621 1099 aa3.7□□□□□ -1.82
LEMD3-204ENST00000542032 LPIN1Q14693 890 aa3.7□□□□□ -1.82
LEMD3-204ENST00000542032 ADCK5Q3MIX3 580 aa3.7□□□□□ -1.82
LEMD3-204ENST00000542032 ANKRD45Q5TZF3 282 aa3.7□□□□□ -1.82
LEMD3-204ENST00000542032 ACAD10Q6JQN1 1059 aa3.7□□□□□ -1.82
LEMD3-204ENST00000542032 TMCO3Q6UWJ1 677 aa3.7□□□□□ -1.82
LEMD3-204ENST00000542032 TSPYL6Q8N831 410 aa3.7□□□□□ -1.82
LEMD3-204ENST00000542032 WFIKKN2Q8TEU8 576 aa3.7□□□□□ -1.82
LEMD3-204ENST00000542032 DNASE2BQ8WZ79 361 aa3.7□□□□□ -1.82
LEMD3-204ENST00000542032 RBM17Q96I25 401 aaKnown RBP3.7□□□□□ -1.82
LEMD3-204ENST00000542032 TWNKQ96RR1 684 aa3.7□□□□□ -1.82
LEMD3-204ENST00000542032 CLSTN3Q9BQT9 956 aa3.7□□□□□ -1.82
LEMD3-204ENST00000542032 TTC12Q9H892 705 aaPredicted RBP3.7□□□□□ -1.82
LEMD3-204ENST00000542032 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.7□□□□□ -1.82
LEMD3-204ENST00000542032 NFKBIL1Q9UBC1 381 aaPredicted RBP3.7□□□□□ -1.82
LEMD3-204ENST00000542032 ORC3Q9UBD5 711 aaPredicted RBP3.7□□□□□ -1.82
LEMD3-204ENST00000542032 NAP1L2Q9ULW6 460 aaPredicted RBP3.7□□□□□ -1.82
LEMD3-204ENST00000542032 ARHGAP26Q9UNA1 814 aa3.7□□□□□ -1.82
LEMD3-204ENST00000542032 CNPY2Q9Y2B0 182 aa3.7□□□□□ -1.82
LEMD3-204ENST00000542032 LINC01553A4QN01 128 aa3.69□□□□□ -1.82
LEMD3-204ENST00000542032 FAM90A7PA6NKC0 464 aa3.69□□□□□ -1.82
LEMD3-204ENST00000542032 FAM90A22PA8MWA6 464 aa3.69□□□□□ -1.82
LEMD3-204ENST00000542032 FAM90A12PA8MX19 464 aa3.69□□□□□ -1.82
LEMD3-204ENST00000542032 FAM90A23PA8MXZ1 464 aa3.69□□□□□ -1.82
LEMD3-204ENST00000542032 ZBED4O75132 1171 aa3.69□□□□□ -1.82
LEMD3-204ENST00000542032 PTP4A3O75365 173 aa3.69□□□□□ -1.82
LEMD3-204ENST00000542032 SERPINI2O75830 405 aa3.69□□□□□ -1.82
LEMD3-204ENST00000542032 RTN3O95197 1032 aaPredicted RBP3.69□□□□□ -1.82
LEMD3-204ENST00000542032 IL1AP01583 271 aa3.69□□□□□ -1.82
LEMD3-204ENST00000542032 HNRNPA1P09651 372 aaKnown RBP eCLIP3.69□□□□□ -1.82
LEMD3-204ENST00000542032 MYF6P23409 242 aa3.69□□□□□ -1.82
LEMD3-204ENST00000542032 HOXC13P31276 330 aa3.69□□□□□ -1.82
LEMD3-204ENST00000542032 PIK3CAP42336 1068 aa3.69□□□□□ -1.82
LEMD3-204ENST00000542032 CLCN5P51795 746 aa3.69□□□□□ -1.82
LEMD3-204ENST00000542032 ARSFP54793 590 aa3.69□□□□□ -1.82
LEMD3-204ENST00000542032 UBE3AQ05086 875 aa3.69□□□□□ -1.82
LEMD3-204ENST00000542032 SLC18A3Q16572 532 aa3.69□□□□□ -1.82
LEMD3-204ENST00000542032 PLEKHO1Q53GL0 409 aaPredicted RBP3.69□□□□□ -1.82
LEMD3-204ENST00000542032 DCAF6Q58WW2 860 aa3.69□□□□□ -1.82
LEMD3-204ENST00000542032 CCDC129Q6ZRS4 1044 aa3.69□□□□□ -1.82
LEMD3-204ENST00000542032 BBS12Q6ZW61 710 aa3.69□□□□□ -1.82
LEMD3-204ENST00000542032 CHD1LQ86WJ1 897 aa3.69□□□□□ -1.82
LEMD3-204ENST00000542032 LMNTD2Q8IXW0 634 aa3.69□□□□□ -1.82
LEMD3-204ENST00000542032 TMEM57Q8N5G2 664 aa3.69□□□□□ -1.82
LEMD3-204ENST00000542032 AADATQ8N5Z0 425 aa3.69□□□□□ -1.82
LEMD3-204ENST00000542032 ZNF114Q8NC26 417 aa3.69□□□□□ -1.82
LEMD3-204ENST00000542032 KCNG4Q8TDN1 519 aa3.69□□□□□ -1.82
LEMD3-204ENST00000542032 CCDC47Q96A33 483 aaKnown RBP3.69□□□□□ -1.82
LEMD3-204ENST00000542032 CCDC34Q96HJ3 373 aa3.69□□□□□ -1.82
LEMD3-204ENST00000542032 C7orf26Q96N11 449 aa3.69□□□□□ -1.82
LEMD3-204ENST00000542032 DUX5Q96PT3 197 aa3.69□□□□□ -1.82
LEMD3-204ENST00000542032 GPR63Q9BZJ6 419 aa3.69□□□□□ -1.82
LEMD3-204ENST00000542032 USP44Q9H0E7 712 aa3.69□□□□□ -1.82
LEMD3-204ENST00000542032 OCIAD1Q9NX40 245 aa3.69□□□□□ -1.82
LEMD3-204ENST00000542032 GTPBP10A4D1E9 387 aaKnown RBP3.68□□□□□ -1.82
LEMD3-204ENST00000542032 PI4KAP2A4QPH2 592 aa3.68□□□□□ -1.82
LEMD3-204ENST00000542032 CBY3A6NI87 242 aa3.68□□□□□ -1.82
LEMD3-204ENST00000542032 KDM4EB2RXH2 506 aaPredicted RBP3.68□□□□□ -1.82
LEMD3-204ENST00000542032 J3KR12 359 aa3.68□□□□□ -1.82
LEMD3-204ENST00000542032 EBAG9O00559 213 aa3.68□□□□□ -1.82
LEMD3-204ENST00000542032 TIMM23O14925 209 aa3.68□□□□□ -1.82
LEMD3-204ENST00000542032 GJB3O75712 270 aa3.68□□□□□ -1.82
LEMD3-204ENST00000542032 DDNO94850 711 aaPredicted RBP3.68□□□□□ -1.82
LEMD3-204ENST00000542032 CHRM4P08173 479 aa3.68□□□□□ -1.82
LEMD3-204ENST00000542032 SNRNP70P08621 437 aaKnown RBP3.68□□□□□ -1.82
LEMD3-204ENST00000542032 DAOP14920 347 aa3.68□□□□□ -1.82
LEMD3-204ENST00000542032 C21orf33P30042 268 aaPredicted RBP3.68□□□□□ -1.82
LEMD3-204ENST00000542032 FMO4P31512 558 aa3.68□□□□□ -1.82
LEMD3-204ENST00000542032 HOXD13P35453 343 aa3.68□□□□□ -1.82
LEMD3-204ENST00000542032 CXCR3P49682 368 aa3.68□□□□□ -1.82
LEMD3-204ENST00000542032 PAPOLAP51003 745 aaKnown RBP3.68□□□□□ -1.82
LEMD3-204ENST00000542032 CLNS1AP54105 237 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms