RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 SKOR1P84550 965 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 ELP6Q0PNE2 266 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 WASHC5Q12768 1159 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 ZNF211Q13398 564 aaPredicted RBP9.78□□□□□ -0.84
YBX3-212ENST00000542002 FZD2Q14332 565 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 PRKD1Q15139 912 aaPredicted RBP9.78□□□□□ -0.84
YBX3-212ENST00000542002 ODF2Q5BJF6 829 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 RALGPS1Q5JS13 557 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 KCTD16Q68DU8 428 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 ERAP2Q6P179 960 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 BBS12Q6ZW61 710 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 DPPA4Q7L190 304 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 TSPAN33Q86UF1 283 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 ZC3H18Q86VM9 953 aaKnown RBP9.78□□□□□ -0.84
YBX3-212ENST00000542002 CCDC50Q8IVM0 306 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 NAXDQ8IW45 347 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 BBS5Q8N3I7 341 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 SLC25A45Q8N413 288 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 PLA2G15Q8NCC3 412 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 BAHD1Q8TBE0 780 aaPredicted RBP9.78□□□□□ -0.84
YBX3-212ENST00000542002 CXorf40AQ8TE69 158 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 TADA1Q96BN2 335 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 CALR3Q96L12 384 aaKnown RBP9.78□□□□□ -0.84
YBX3-212ENST00000542002 AGAP3Q96P47 875 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 FAM118BQ9BPY3 351 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 POLR1EQ9GZS1 481 aaKnown RBP9.78□□□□□ -0.84
YBX3-212ENST00000542002 ERVMER34-1Q9H9K5 563 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 GDF3Q9NR23 364 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 UCKL1Q9NWZ5 548 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 B4GALT6Q9UBX8 382 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 GUCA1BQ9UMX6 200 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 CHKBQ9Y259 395 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 TTLL3Q9Y4R7 772 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 PCDHGB2Q9Y5G2 931 aa9.78□□□□□ -0.84
YBX3-212ENST00000542002 SPTY2D1-AS1A0A0U1RR47 76 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 TCRBV7S2A1N4TA0A589 114 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 CCDC66A2RUB6 948 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 GOLGA6L3A6NEY3 463 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 NPIPB15A6NHN6 443 aaPredicted RBP9.77□□□□□ -0.85
YBX3-212ENST00000542002 FPGTO14772 594 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 ARHGAP6O43182 974 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 PCDHGA12O60330 932 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 SDC3O75056 442 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 RECQL5O94762 991 aaPredicted RBP9.77□□□□□ -0.85
YBX3-212ENST00000542002 TOP3BO95985 862 aaKnown RBP9.77□□□□□ -0.85
YBX3-212ENST00000542002 CPP00450 1065 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 GIMD1P0DJR0 217 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 TGM2P21980 687 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 PTPN3P26045 913 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 CD86P42081 329 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 RWDD2BP57060 319 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 POLR2LP62875 67 aaKnown RBP9.77□□□□□ -0.85
YBX3-212ENST00000542002 PTSQ03393 145 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 OVGP1Q12889 678 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 EIF2B5Q13144 721 aaKnown RBP9.77□□□□□ -0.85
YBX3-212ENST00000542002 TFDP2Q14188 446 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 INPP5AQ14642 412 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 AGERQ15109 404 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 IRF4Q15306 451 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 CNGA3Q16281 694 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 PPP2R5EQ16537 467 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 CDKN3Q16667 212 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 TEX44Q53QW1 395 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 SLC45A4Q5BKX6 768 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 CFAP58Q5T655 872 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 ARMC12Q5T9G4 340 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 KYAT3Q6YP21 454 aaKnown RBP9.77□□□□□ -0.85
YBX3-212ENST00000542002 PEX26Q7Z412 305 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 HSD11B1LQ7Z5J1 315 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 RNF10Q8N5U6 811 aaKnown RBP9.77□□□□□ -0.85
YBX3-212ENST00000542002 SPATA22Q8NHS9 363 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 SETD7Q8WTS6 366 aaKnown RBP9.77□□□□□ -0.85
YBX3-212ENST00000542002 P3H4Q92791 437 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 SKA1Q96BD8 255 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 SCRN2Q96FV2 425 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 IMP4Q96G21 291 aaKnown RBP9.77□□□□□ -0.85
YBX3-212ENST00000542002 HES6Q96HZ4 224 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 RBM41Q96IZ5 413 aaKnown RBP9.77□□□□□ -0.85
YBX3-212ENST00000542002 TEKT5Q96M29 485 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 COQ10AQ96MF6 247 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 MCCC1Q96RQ3 725 aaPredicted RBP9.77□□□□□ -0.85
YBX3-212ENST00000542002 RBM15Q96T37 977 aaKnown RBP eCLIP9.77□□□□□ -0.85
YBX3-212ENST00000542002 OSBPL8Q9BZF1 889 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 BRD8Q9H0E9 1235 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 SEPT10Q9P0V9 454 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 AMACRQ9UHK6 382 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 AMFRQ9UKV5 643 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 PHTF1Q9UMS5 762 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 WASF3Q9UPY6 502 aa9.77□□□□□ -0.85
YBX3-212ENST00000542002 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.77□□□□□ -0.85
YBX3-212ENST00000542002 CFAP69A5D8W1 941 aa9.76□□□□□ -0.85
YBX3-212ENST00000542002 A6NNZ2 444 aa9.76□□□□□ -0.85
YBX3-212ENST00000542002 GOLGA6L6A8MZA4 724 aa9.76□□□□□ -0.85
YBX3-212ENST00000542002 K7ESM1 405 aa9.76□□□□□ -0.85
YBX3-212ENST00000542002 PPP1R12AO14974 1030 aaPredicted RBP9.76□□□□□ -0.85
YBX3-212ENST00000542002 LZTS3O60299 673 aaPredicted RBP9.76□□□□□ -0.85
YBX3-212ENST00000542002 DFNA5O60443 496 aa9.76□□□□□ -0.85
YBX3-212ENST00000542002 HEXIM1O94992 359 aaKnown RBP9.76□□□□□ -0.85
YBX3-212ENST00000542002 MT-CYBP00156 380 aaPredicted RBP9.76□□□□□ -0.85
YBX3-212ENST00000542002 CES1P23141 567 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms