RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 FGF19O95750 216 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 FAM87AP0C7U9 286 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 GOT1P17174 413 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 ERCC2P18074 760 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 NDUFV2P19404 249 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 AMPD1P23109 780 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 CCNCP24863 283 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 CNTFP26441 200 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 RBL1P28749 1068 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 ETFBP38117 255 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 SLC6A11P48066 632 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 SLC11A2P49281 568 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 NDST2P52849 883 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 SLC18A1P54219 525 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 EPHB3P54753 998 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 TBX4P57082 545 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 GEMIN4P57678 1058 aaKnown RBP8.48□□□□□ -1.05
CHD4-208ENST00000540960 MRPS21P82921 87 aaKnown RBP8.48□□□□□ -1.05
CHD4-208ENST00000540960 PPIDQ08752 370 aaKnown RBP8.48□□□□□ -1.05
CHD4-208ENST00000540960 GALNT2Q10471 571 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 LAMB3Q13751 1172 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 CA9Q16790 459 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 SNX30Q5VWJ9 437 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 NCBP2-AS2Q69YL0 99 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 TAC4Q86UU9 113 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 ZBED8Q8IZ13 594 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 CPA6Q8N4T0 437 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 MAB21L3Q8N8X9 362 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 TTC16Q8NEE8 873 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 NANOS1Q8WY41 292 aaKnown RBP8.48□□□□□ -1.05
CHD4-208ENST00000540960 CPT1BQ92523 772 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 CDKL2Q92772 493 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 NACA2Q9H009 215 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 FAM107BQ9H098 131 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 MIR1-1HGQ9H1L0 117 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 EPN3Q9H201 632 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 VPS37BQ9H9H4 285 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 ETNK2Q9NVF9 386 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 TMLHEQ9NVH6 421 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 GPATCH2LQ9NWQ4 482 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 NKIRAS1Q9NYS0 192 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 NINJ2Q9NZG7 142 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 TRPM5Q9NZQ8 1165 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 MARCH2Q9P0N8 246 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 COX16Q9P0S2 106 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 AAR2Q9Y312 384 aaKnown RBP8.48□□□□□ -1.05
CHD4-208ENST00000540960 MED13LQ71F56 2210 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 SCN1AP35498 2009 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 IQANK1A0A1B0GTG1 560 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 TLDC2A0PJX2 215 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 ARHGAP42A6NI28 874 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 SDR42E2A6NKP2 422 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 KCNU1A8MYU2 1149 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 RNF103O00237 685 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 SHOX2O60902 331 aaPredicted RBP8.47□□□□□ -1.05
CHD4-208ENST00000540960 ANXA9O76027 345 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 ACSL3O95573 720 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 LATS1O95835 1130 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 CPP00450 1065 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 APRTP07741 180 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 RHOQP17081 205 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 ATP5C1P36542 298 aaKnown RBP8.47□□□□□ -1.05
CHD4-208ENST00000540960 MDH1P40925 334 aaKnown RBP8.47□□□□□ -1.05
CHD4-208ENST00000540960 MSH2P43246 934 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 KIR2DL1P43626 348 aaPredicted RBP8.47□□□□□ -1.05
CHD4-208ENST00000540960 MAPKAPK2P49137 400 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 HARS2P49590 506 aaKnown RBP8.47□□□□□ -1.05
CHD4-208ENST00000540960 SERPINB9P50453 376 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 YBEYP58557 167 aaPredicted RBP8.47□□□□□ -1.05
CHD4-208ENST00000540960 IL9RQ01113 521 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 GBE1Q04446 702 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 AP1B1Q10567 949 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 EIF4EBP2Q13542 120 aaPredicted RBP8.47□□□□□ -1.05
CHD4-208ENST00000540960 KCNJ11Q14654 390 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 PDGFRLQ15198 375 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 KYNUQ16719 465 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 SKIDA1Q1XH10 827 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 EML3Q32P44 896 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 ANKRD20A2Q5SQ80 823 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 ANKRD20A1Q5TYW2 823 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 TTC39BQ5VTQ0 682 aaPredicted RBP8.47□□□□□ -1.05
CHD4-208ENST00000540960 ANKRD20A3Q5VUR7 823 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 RWDD4Q6NW29 188 aaKnown RBP8.47□□□□□ -1.05
CHD4-208ENST00000540960 MICALCLQ6ZW33 695 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 B4GALNT4Q76KP1 1039 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 ZNF771Q7L3S4 317 aaPredicted RBP8.47□□□□□ -1.05
CHD4-208ENST00000540960 BHLHA9Q7RTU4 235 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 GPRIN1Q7Z2K8 1008 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 TMEM150AQ86TG1 271 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 TICAM1Q8IUC6 712 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 CCDC13Q8IYE1 715 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 BBS5Q8N3I7 341 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 ATPAF2Q8N5M1 289 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 EDEM1Q92611 657 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 EXTL1Q92935 676 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 PSMG2Q969U7 264 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 PLD4Q96BZ4 506 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 TLCD1Q96CP7 247 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 MTBPQ96DY7 904 aa8.47□□□□□ -1.05
CHD4-208ENST00000540960 TRMT2BQ96GJ1 504 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms