RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 NPWQ8N729 165 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 EIF1ADQ8N9N8 165 aaKnown RBP9.58□□□□□ -0.88
TTC39C-203ENST00000540918 PCYOX1LQ8NBM8 494 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 GPR156Q8NFN8 814 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 FUBP3Q96I24 572 aaKnown RBP eCLIP9.58□□□□□ -0.88
TTC39C-203ENST00000540918 RIC8BQ9NVN3 520 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 PSMD13Q9UNM6 376 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 TBC1D3DA0A087WVF3 549 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 TBC1D3IA0A087WXS9 549 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 TBC1D3EA0A087X179 549 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 TBC1D3KA0A087X1G2 549 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 TBC1D3FA6NER0 549 aaPredicted RBP9.58□□□□□ -0.88
TTC39C-203ENST00000540918 TBC1D3LB9A6J9 549 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 DNM1LO00429 736 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 GOT2P00505 430 aaKnown RBP9.58□□□□□ -0.88
TTC39C-203ENST00000540918 TBC1D3HP0C7X1 549 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 HLA-EP13747 358 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 CCNCP24863 283 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 NRIP1P48552 1158 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 WDR4P57081 412 aaKnown RBP9.58□□□□□ -0.88
TTC39C-203ENST00000540918 PRKAA1Q13131 559 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 PPIGQ13427 754 aaKnown RBP eCLIP9.58□□□□□ -0.88
TTC39C-203ENST00000540918 GPM6BQ13491 265 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 TEAD2Q15562 447 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 TBC1D3GQ6DHY5 549 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 TBC1D3CQ6IPX1 549 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 POTEHQ6S545 545 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 SCUBE1Q8IWY4 988 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 TBC1D3Q8IZP1 549 aaPredicted RBP9.58□□□□□ -0.88
TTC39C-203ENST00000540918 MYO19Q96H55 970 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 MAGEB10Q96LZ2 347 aaPredicted RBP9.58□□□□□ -0.88
TTC39C-203ENST00000540918 KLHL32Q96NJ5 620 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 PARVBQ9HBI1 364 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 FBXL21Q9UKT6 434 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 NDRG2Q9UN36 371 aaKnown RBP9.58□□□□□ -0.88
TTC39C-203ENST00000540918 CDK5RAP2Q96SN8 1893 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 COL22A1Q8NFW1 1626 aaPredicted RBP9.58□□□□□ -0.88
TTC39C-203ENST00000540918 K7ERQ8 282 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 TEX28O15482 410 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 TMCC1O94876 653 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 PRAMEF1O95521 474 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 ELFN1P0C7U0 828 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 GSSP48637 474 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 STK19P49842 368 aaPredicted RBP9.58□□□□□ -0.88
TTC39C-203ENST00000540918 POLR2LP62875 67 aaKnown RBP9.58□□□□□ -0.88
TTC39C-203ENST00000540918 TBL3Q12788 808 aaKnown RBP9.58□□□□□ -0.88
TTC39C-203ENST00000540918 PTK2BQ14289 1009 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 CCDC153Q494R4 210 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 ADGRF1Q5T601 910 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 TMEM173Q86WV6 379 aaPredicted RBP9.58□□□□□ -0.88
TTC39C-203ENST00000540918 RGL4Q8IZJ4 473 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 IRGQQ8WZA9 623 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 CLPTM1LQ96KA5 538 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 CENPKQ9BS16 269 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 EBF3Q9H4W6 596 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 KIAA1522Q9P206 1035 aaPredicted RBP9.58□□□□□ -0.88
TTC39C-203ENST00000540918 INSL6Q9Y581 213 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 COL4A5P29400 1685 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 ABCA3Q99758 1704 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 NPEPPSL1A6NEC2 478 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 SYCE1LA8MT33 242 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 PRR5-ARHGAP8B1AHC4 643 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 SLC31A1O15431 190 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 COCHO43405 550 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 ZNF189O75820 626 aaPredicted RBP9.58□□□□□ -0.88
TTC39C-203ENST00000540918 RPL14P50914 215 aaKnown RBP9.58□□□□□ -0.88
TTC39C-203ENST00000540918 RAP1GDS1P52306 607 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 ARHGAP8P85298 464 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 HNRNPDQ14103 355 aaKnown RBP9.58□□□□□ -0.88
TTC39C-203ENST00000540918 MAPRE2Q15555 327 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 MFSD4BQ5TF39 518 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 HECTD2Q5U5R9 776 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 PPP4R4Q6NUP7 873 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 SLC39A5Q6ZMH5 540 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 PIM3Q86V86 326 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 REM2Q8IYK8 340 aaPredicted RBP9.58□□□□□ -0.88
TTC39C-203ENST00000540918 ZNF614Q8N883 585 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 ATXN2LQ8WWM7 1075 aaKnown RBP9.58□□□□□ -0.88
TTC39C-203ENST00000540918 PYDC1Q8WXC3 89 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 NMUR2Q9GZQ4 415 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 EFCAB1Q9HAE3 211 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 DUS2Q9NX74 493 aaKnown RBP9.58□□□□□ -0.88
TTC39C-203ENST00000540918 TLR6Q9Y2C9 796 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 ORC6Q9Y5N6 252 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 KANSL1LA0AUZ9 987 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 INSIG1O15503 277 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 NBNO60934 754 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 RNASEH2AO75792 299 aaKnown RBP9.57□□□□□ -0.88
TTC39C-203ENST00000540918 NDST3O95803 873 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 PFKMP08237 780 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 ABHD2P08910 425 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 OR56A5P0C7T3 313 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 ZCCHC18P0CG32 403 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 TM4SF4P48230 202 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 MOGSQ13724 837 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 FASTKQ14296 549 aaKnown RBP9.57□□□□□ -0.88
TTC39C-203ENST00000540918 ITIH4Q14624 930 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 DNAL1Q4LDG9 190 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 ATP6AP1LQ52LC2 224 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 TRNP1Q6NT89 227 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms