RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 LIPIQ6XZB0 460 aa16.98■□□□□ 0.31
CD9-209ENST00000540891 KANSL1Q7Z3B3 1105 aa16.98■□□□□ 0.31
CD9-209ENST00000540891 PTAR1Q7Z6K3 402 aaPredicted RBP16.98■□□□□ 0.31
CD9-209ENST00000540891 GATAD2AQ86YP4 633 aa16.98■□□□□ 0.31
CD9-209ENST00000540891 CCDC50Q8IVM0 306 aa16.98■□□□□ 0.31
CD9-209ENST00000540891 OXR1Q8N573 874 aa16.98■□□□□ 0.31
CD9-209ENST00000540891 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.98■□□□□ 0.31
CD9-209ENST00000540891 FAM174AQ8TBP5 190 aa16.98■□□□□ 0.31
CD9-209ENST00000540891 SETD7Q8WTS6 366 aaKnown RBP16.98■□□□□ 0.31
CD9-209ENST00000540891 PDCD6IPQ8WUM4 868 aaKnown RBP16.98■□□□□ 0.31
CD9-209ENST00000540891 PIH1D2Q8WWB5 315 aa16.98■□□□□ 0.31
CD9-209ENST00000540891 CEP41Q9BYV8 373 aa16.98■□□□□ 0.31
CD9-209ENST00000540891 TTLL3Q9Y4R7 772 aa16.98■□□□□ 0.31
CD9-209ENST00000540891 RAI2Q9Y5P3 530 aa16.98■□□□□ 0.31
CD9-209ENST00000540891 CAPN6Q9Y6Q1 641 aa16.98■□□□□ 0.31
CD9-209ENST00000540891 CCDC66A2RUB6 948 aa16.97■□□□□ 0.31
CD9-209ENST00000540891 CFAP69A5D8W1 941 aa16.97■□□□□ 0.31
CD9-209ENST00000540891 A8MX80 341 aa16.97■□□□□ 0.31
CD9-209ENST00000540891 PPP1R12AO14974 1030 aaPredicted RBP16.97■□□□□ 0.31
CD9-209ENST00000540891 PRLP01236 227 aa16.97■□□□□ 0.31
CD9-209ENST00000540891 LHCGRP22888 699 aa16.97■□□□□ 0.31
CD9-209ENST00000540891 ARRB1P49407 418 aaPredicted RBP16.97■□□□□ 0.31
CD9-209ENST00000540891 FOXK2Q01167 660 aa16.97■□□□□ 0.31
CD9-209ENST00000540891 SUZ12Q15022 739 aaKnown RBP16.97■□□□□ 0.31
CD9-209ENST00000540891 PRKD1Q15139 912 aaPredicted RBP16.97■□□□□ 0.31
CD9-209ENST00000540891 IRF4Q15306 451 aa16.97■□□□□ 0.31
CD9-209ENST00000540891 ARMC12Q5T9G4 340 aa16.97■□□□□ 0.31
CD9-209ENST00000540891 AADACL2Q6P093 401 aa16.97■□□□□ 0.31
CD9-209ENST00000540891 BBS12Q6ZW61 710 aa16.97■□□□□ 0.31
CD9-209ENST00000540891 PAF1Q8N7H5 531 aa16.97■□□□□ 0.31
CD9-209ENST00000540891 SMIM14Q96QK8 99 aa16.97■□□□□ 0.31
CD9-209ENST00000540891 MCCC1Q96RQ3 725 aaPredicted RBP16.97■□□□□ 0.31
CD9-209ENST00000540891 HEMGNQ9BXL5 484 aa16.97■□□□□ 0.31
CD9-209ENST00000540891 TDRD1Q9BXT4 1180 aaKnown RBP16.97■□□□□ 0.31
CD9-209ENST00000540891 BRD8Q9H0E9 1235 aa16.97■□□□□ 0.31
CD9-209ENST00000540891 GRPEL1Q9HAV7 217 aa16.97■□□□□ 0.31
CD9-209ENST00000540891 PHTF1Q9UMS5 762 aa16.97■□□□□ 0.31
CD9-209ENST00000540891 PPIL1Q9Y3C6 166 aa16.97■□□□□ 0.31
CD9-209ENST00000540891 SPTBN2O15020 2390 aa16.97■□□□□ 0.31
CD9-209ENST00000540891 CABIN1Q9Y6J0 2220 aa16.97■□□□□ 0.31
CD9-209ENST00000540891 PCNX2A6NKB5 2137 aa16.96■□□□□ 0.31
CD9-209ENST00000540891 NPIPB15A6NHN6 443 aaPredicted RBP16.96■□□□□ 0.31
CD9-209ENST00000540891 YKT6O15498 198 aa16.96■□□□□ 0.31
CD9-209ENST00000540891 ARHGAP6O43182 974 aa16.96■□□□□ 0.31
CD9-209ENST00000540891 CES1P23141 567 aa16.96■□□□□ 0.31
CD9-209ENST00000540891 PTPN7P35236 360 aa16.96■□□□□ 0.31
CD9-209ENST00000540891 RABIFP47224 123 aa16.96■□□□□ 0.31
CD9-209ENST00000540891 COPS2P61201 443 aa16.96■□□□□ 0.31
CD9-209ENST00000540891 SKOR1P84550 965 aa16.96■□□□□ 0.31
CD9-209ENST00000540891 CCZ1BP86790 482 aa16.96■□□□□ 0.31
CD9-209ENST00000540891 CCZ1P86791 482 aaPredicted RBP16.96■□□□□ 0.31
CD9-209ENST00000540891 FZD2Q14332 565 aa16.96■□□□□ 0.31
CD9-209ENST00000540891 CNGA3Q16281 694 aa16.96■□□□□ 0.31
CD9-209ENST00000540891 LRRC8AQ8IWT6 810 aa16.96■□□□□ 0.31
CD9-209ENST00000540891 TXLNBQ8N3L3 684 aa16.96■□□□□ 0.31
CD9-209ENST00000540891 HAUS1Q96CS2 278 aa16.96■□□□□ 0.31
CD9-209ENST00000540891 C1QTNF7Q9BXJ2 289 aa16.96■□□□□ 0.31
CD9-209ENST00000540891 PACSIN2Q9UNF0 486 aaPredicted RBP16.96■□□□□ 0.31
CD9-209ENST00000540891 SPTY2D1-AS1A0A0U1RR47 76 aa16.95■□□□□ 0.3
CD9-209ENST00000540891 DDX3YO15523 660 aaKnown RBP16.95■□□□□ 0.3
CD9-209ENST00000540891 LZTS3O60299 673 aaPredicted RBP16.95■□□□□ 0.3
CD9-209ENST00000540891 SDC3O75056 442 aa16.95■□□□□ 0.3
CD9-209ENST00000540891 NEBLO76041 1014 aa16.95■□□□□ 0.3
CD9-209ENST00000540891 RECQL5O94762 991 aaPredicted RBP16.95■□□□□ 0.3
CD9-209ENST00000540891 HEXIM1O94992 359 aaKnown RBP16.95■□□□□ 0.3
CD9-209ENST00000540891 FTCDO95954 541 aa16.95■□□□□ 0.3
CD9-209ENST00000540891 ALPIP09923 528 aa16.95■□□□□ 0.3
CD9-209ENST00000540891 ELFN1P0C7U0 828 aa16.95■□□□□ 0.3
CD9-209ENST00000540891 PYGMP11217 842 aa16.95■□□□□ 0.3
CD9-209ENST00000540891 CTPS1P17812 591 aa16.95■□□□□ 0.3
CD9-209ENST00000540891 PTPN3P26045 913 aa16.95■□□□□ 0.3
CD9-209ENST00000540891 PMLP29590 882 aa16.95■□□□□ 0.3
CD9-209ENST00000540891 VIPR1P32241 457 aa16.95■□□□□ 0.3
CD9-209ENST00000540891 GRK6P43250 576 aa16.95■□□□□ 0.3
CD9-209ENST00000540891 RWDD2BP57060 319 aa16.95■□□□□ 0.3
CD9-209ENST00000540891 SIM1P81133 766 aaPredicted RBP16.95■□□□□ 0.3
CD9-209ENST00000540891 PDE1CQ14123 709 aaPredicted RBP16.95■□□□□ 0.3
CD9-209ENST00000540891 LRRC14Q15048 493 aa16.95■□□□□ 0.3
CD9-209ENST00000540891 TRIP6Q15654 476 aaKnown RBP16.95■□□□□ 0.3
CD9-209ENST00000540891 ZNF542PQ5EBM4 170 aa16.95■□□□□ 0.3
CD9-209ENST00000540891 BZW1Q7L1Q6 419 aaKnown RBP16.95■□□□□ 0.3
CD9-209ENST00000540891 GLRX5Q86SX6 157 aa16.95■□□□□ 0.3
CD9-209ENST00000540891 TSPAN33Q86UF1 283 aa16.95■□□□□ 0.3
CD9-209ENST00000540891 DCP2Q8IU60 420 aaKnown RBP16.95■□□□□ 0.3
CD9-209ENST00000540891 CBARPQ8N350 705 aaPredicted RBP16.95■□□□□ 0.3
CD9-209ENST00000540891 CCDC112Q8NEF3 446 aa16.95■□□□□ 0.3
CD9-209ENST00000540891 RHBDD1Q8TEB9 315 aa16.95■□□□□ 0.3
CD9-209ENST00000540891 TFB1MQ8WVM0 346 aaKnown RBP16.95■□□□□ 0.3
CD9-209ENST00000540891 P3H4Q92791 437 aa16.95■□□□□ 0.3
CD9-209ENST00000540891 SCRN2Q96FV2 425 aa16.95■□□□□ 0.3
CD9-209ENST00000540891 COQ10AQ96MF6 247 aa16.95■□□□□ 0.3
CD9-209ENST00000540891 AGAP3Q96P47 875 aa16.95■□□□□ 0.3
CD9-209ENST00000540891 SEPT10Q9P0V9 454 aa16.95■□□□□ 0.3
CD9-209ENST00000540891 KLF15Q9UIH9 416 aa16.95■□□□□ 0.3
CD9-209ENST00000540891 AMFRQ9UKV5 643 aa16.95■□□□□ 0.3
CD9-209ENST00000540891 PNMA8BQ9ULN7 279 aaPredicted RBP16.95■□□□□ 0.3
CD9-209ENST00000540891 CHKBQ9Y259 395 aa16.95■□□□□ 0.3
CD9-209ENST00000540891 EFR3BQ9Y2G0 817 aa16.95■□□□□ 0.3
CD9-209ENST00000540891 A0A0U1RQS6 177 aa16.94■□□□□ 0.3
CD9-209ENST00000540891 ITGAVP06756 1048 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms