RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 PGLSO95336 258 aa15.14■□□□□ 0.01
UBE3B-212ENST00000540230 IPO7O95373 1038 aaKnown RBP15.14■□□□□ 0.01
UBE3B-212ENST00000540230 JCHAINP01591 159 aa15.14■□□□□ 0.01
UBE3B-212ENST00000540230 ATXN1LP0C7T5 689 aaKnown RBP15.14■□□□□ 0.01
UBE3B-212ENST00000540230 PECAM1P16284 738 aaPredicted RBP15.14■□□□□ 0.01
UBE3B-212ENST00000540230 RABIFP47224 123 aa15.14■□□□□ 0.01
UBE3B-212ENST00000540230 PDE1CQ14123 709 aaPredicted RBP15.14■□□□□ 0.01
UBE3B-212ENST00000540230 NYAP1Q6ZVC0 841 aa15.14■□□□□ 0.01
UBE3B-212ENST00000540230 DPPA4Q7L190 304 aa15.14■□□□□ 0.01
UBE3B-212ENST00000540230 KATNAL2Q8IYT4 538 aa15.14■□□□□ 0.01
UBE3B-212ENST00000540230 SLC25A45Q8N413 288 aa15.14■□□□□ 0.01
UBE3B-212ENST00000540230 EID2Q8N6I1 236 aa15.14■□□□□ 0.01
UBE3B-212ENST00000540230 CNTD1Q8N815 330 aa15.14■□□□□ 0.01
UBE3B-212ENST00000540230 HERPUD2Q9BSE4 406 aa15.14■□□□□ 0.01
UBE3B-212ENST00000540230 MAK16Q9BXY0 300 aaKnown RBP15.14■□□□□ 0.01
UBE3B-212ENST00000540230 RAI2Q9Y5P3 530 aa15.14■□□□□ 0.01
UBE3B-212ENST00000540230 hCG_1818297A0A087WSY0 165 aa15.13■□□□□ 0.01
UBE3B-212ENST00000540230 GRID2IPA4D2P6 1211 aa15.13■□□□□ 0.01
UBE3B-212ENST00000540230 BTNL10A8MVZ5 291 aa15.13■□□□□ 0.01
UBE3B-212ENST00000540230 LZTS3O60299 673 aaPredicted RBP15.13■□□□□ 0.01
UBE3B-212ENST00000540230 FZD6O60353 706 aa15.13■□□□□ 0.01
UBE3B-212ENST00000540230 CST8O60676 142 aa15.13■□□□□ 0.01
UBE3B-212ENST00000540230 LHCGRP22888 699 aa15.13■□□□□ 0.01
UBE3B-212ENST00000540230 AP1B1Q10567 949 aa15.13■□□□□ 0.01
UBE3B-212ENST00000540230 EIF2B5Q13144 721 aaKnown RBP15.13■□□□□ 0.01
UBE3B-212ENST00000540230 LRRC14Q15048 493 aa15.13■□□□□ 0.01
UBE3B-212ENST00000540230 CNGA3Q16281 694 aa15.13■□□□□ 0.01
UBE3B-212ENST00000540230 ODF2Q5BJF6 829 aa15.13■□□□□ 0.01
UBE3B-212ENST00000540230 RALGPS1Q5JS13 557 aa15.13■□□□□ 0.01
UBE3B-212ENST00000540230 PELI3Q8N2H9 469 aa15.13■□□□□ 0.01
UBE3B-212ENST00000540230 PLA2G15Q8NCC3 412 aa15.13■□□□□ 0.01
UBE3B-212ENST00000540230 FAM174AQ8TBP5 190 aa15.13■□□□□ 0.01
UBE3B-212ENST00000540230 PIH1D2Q8WWB5 315 aa15.13■□□□□ 0.01
UBE3B-212ENST00000540230 ZNF830Q96NB3 372 aaPredicted RBP15.13■□□□□ 0.01
UBE3B-212ENST00000540230 IL12RB2Q99665 862 aa15.13■□□□□ 0.01
UBE3B-212ENST00000540230 DNAJC28Q9NX36 388 aa15.13■□□□□ 0.01
UBE3B-212ENST00000540230 NPIPB15A6NHN6 443 aaPredicted RBP15.12■□□□□ 0.01
UBE3B-212ENST00000540230 PIAS2O75928 621 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 RECQL5O94762 991 aaPredicted RBP15.12■□□□□ 0.01
UBE3B-212ENST00000540230 PCCBP05166 539 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 MMP2P08253 660 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 ALPIP09923 528 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 ELFN1P0C7U0 828 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 GIMD1P0DJR0 217 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 CTPS1P17812 591 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 DGKAP23743 735 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 POLR2LP62875 67 aaKnown RBP15.12■□□□□ 0.01
UBE3B-212ENST00000540230 IFI35P80217 286 aaPredicted RBP15.12■□□□□ 0.01
UBE3B-212ENST00000540230 AGERQ15109 404 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 ARMC12Q5T9G4 340 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 KIAA1328Q86T90 577 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 TSPAN33Q86UF1 283 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 PARGQ86W56 976 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 CHCHD4Q8N4Q1 142 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 LRRC57Q8N9N7 239 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 HAUS1Q96CS2 278 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 CDC6Q99741 560 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 ANP32EQ9BTT0 268 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 TDRD1Q9BXT4 1180 aaKnown RBP15.12■□□□□ 0.01
UBE3B-212ENST00000540230 TCEAL2Q9H3H9 227 aaPredicted RBP15.12■□□□□ 0.01
UBE3B-212ENST00000540230 ANGPTL2Q9UKU9 493 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 PHTF1Q9UMS5 762 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 LRP4O75096 1905 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 TRIM38O00635 465 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 ZRANB2O95218 330 aaKnown RBP eCLIP15.12■□□□□ 0.01
UBE3B-212ENST00000540230 PRLP01236 227 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 CSF2P04141 144 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 ZFXP17010 805 aaPredicted RBP15.12■□□□□ 0.01
UBE3B-212ENST00000540230 VIPR1P32241 457 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 CTNNA1P35221 906 aaKnown RBP15.12■□□□□ 0.01
UBE3B-212ENST00000540230 NAP1L1P55209 391 aaKnown RBP15.12■□□□□ 0.01
UBE3B-212ENST00000540230 SHC2P98077 582 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 DNAJC3Q13217 504 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 INPP5AQ14642 412 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 PDK1Q15118 436 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 TFDP3Q5H9I0 405 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 KCTD16Q68DU8 428 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 DCP2Q8IU60 420 aaKnown RBP15.12■□□□□ 0.01
UBE3B-212ENST00000540230 CCDC50Q8IVM0 306 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 RBFAQ8N0V3 343 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 FUBP1Q96AE4 644 aaKnown RBP15.12■□□□□ 0.01
UBE3B-212ENST00000540230 MCCC1Q96RQ3 725 aaPredicted RBP15.12■□□□□ 0.01
UBE3B-212ENST00000540230 SCNM1Q9BWG6 230 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 C1QTNF7Q9BXJ2 289 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 SEPT10Q9P0V9 454 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 FTSJ1Q9UET6 329 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 AMACRQ9UHK6 382 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 KLK13Q9UKR3 277 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 CHKBQ9Y259 395 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 OR1A2Q9Y585 309 aa15.12■□□□□ 0.01
UBE3B-212ENST00000540230 PTPRBP23467 1997 aa15.11■□□□□ 0.01
UBE3B-212ENST00000540230 AKAP13Q12802 2813 aa15.11■□□□□ 0.01
UBE3B-212ENST00000540230 A0A1W2PQ67 120 aa15.11■□□□□ 0.01
UBE3B-212ENST00000540230 MACROD2A1Z1Q3 448 aa15.11■□□□□ 0.01
UBE3B-212ENST00000540230 CFAP69A5D8W1 941 aa15.11■□□□□ 0.01
UBE3B-212ENST00000540230 PPP1R12AO14974 1030 aaPredicted RBP15.11■□□□□ 0.01
UBE3B-212ENST00000540230 TNFSF14O43557 240 aa15.11■□□□□ 0.01
UBE3B-212ENST00000540230 NEBLO76041 1014 aa15.11■□□□□ 0.01
UBE3B-212ENST00000540230 DKK1O94907 266 aa15.11■□□□□ 0.01
UBE3B-212ENST00000540230 HEXIM1O94992 359 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms