RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 GBA2Q9HCG7 927 aaPredicted RBP6.09□□□□□ -1.43
PTPRD-214ENST00000540109 S100A14Q9HCY8 104 aa6.09□□□□□ -1.43
PTPRD-214ENST00000540109 ANKRD6Q9Y2G4 727 aa6.09□□□□□ -1.43
PTPRD-214ENST00000540109 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.09□□□□□ -1.44
PTPRD-214ENST00000540109 TCRBV5S1A1TA0A578 114 aa6.09□□□□□ -1.44
PTPRD-214ENST00000540109 TM7SF2O76062 418 aa6.09□□□□□ -1.44
PTPRD-214ENST00000540109 ARIH2O95376 493 aa6.09□□□□□ -1.44
PTPRD-214ENST00000540109 SERPINA6P08185 405 aa6.09□□□□□ -1.44
PTPRD-214ENST00000540109 NME5P56597 212 aa6.09□□□□□ -1.44
PTPRD-214ENST00000540109 SESN2P58004 480 aaPredicted RBP6.09□□□□□ -1.44
PTPRD-214ENST00000540109 GMFBP60983 142 aa6.09□□□□□ -1.44
PTPRD-214ENST00000540109 SRP54P61011 504 aaKnown RBP6.09□□□□□ -1.44
PTPRD-214ENST00000540109 MYBPC1Q00872 1141 aa6.09□□□□□ -1.44
PTPRD-214ENST00000540109 IFRD2Q12894 506 aaPredicted RBP6.09□□□□□ -1.44
PTPRD-214ENST00000540109 CDC16Q13042 620 aa6.09□□□□□ -1.44
PTPRD-214ENST00000540109 AUHQ13825 339 aaKnown RBP6.09□□□□□ -1.44
PTPRD-214ENST00000540109 XKR5Q6UX68 686 aa6.09□□□□□ -1.44
PTPRD-214ENST00000540109 PTAR1Q7Z6K3 402 aaPredicted RBP6.09□□□□□ -1.44
PTPRD-214ENST00000540109 FAM228AQ86W67 206 aa6.09□□□□□ -1.44
PTPRD-214ENST00000540109 AKAP1Q92667 903 aaKnown RBP eCLIP6.09□□□□□ -1.44
PTPRD-214ENST00000540109 HPDLQ96IR7 371 aa6.09□□□□□ -1.44
PTPRD-214ENST00000540109 HNRNPABQ99729 332 aaKnown RBP6.09□□□□□ -1.44
PTPRD-214ENST00000540109 OXCT2Q9BYC2 517 aaPredicted RBP6.09□□□□□ -1.44
PTPRD-214ENST00000540109 TMEM168Q9H0V1 697 aa6.09□□□□□ -1.44
PTPRD-214ENST00000540109 CYTH4Q9UIA0 394 aa6.09□□□□□ -1.44
PTPRD-214ENST00000540109 ANAPC2Q9UJX6 822 aa6.09□□□□□ -1.44
PTPRD-214ENST00000540109 GNEQ9Y223 722 aaKnown RBP6.09□□□□□ -1.44
PTPRD-214ENST00000540109 LOC100506127A0A0U1RQW1 187 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 OR7A10O76100 309 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 IFNA7P01567 189 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 PGK2P07205 417 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 MMP3P08254 477 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 ADRA1DP25100 572 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 NSUN2Q08J23 767 aaKnown RBP eCLIP6.08□□□□□ -1.44
PTPRD-214ENST00000540109 NCF4Q15080 339 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 TAZQ16635 292 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 ALFQ53S48 1182 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 FAM47BQ8NA70 645 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 UXS1Q8NBZ7 420 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 ATG4AQ8WYN0 398 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 SMAD5Q99717 465 aaKnown RBP6.08□□□□□ -1.44
PTPRD-214ENST00000540109 AP5M1Q9H0R1 490 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 TXNRD2Q9NNW7 524 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 QPCTLQ9NXS2 382 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 DPP3Q9NY33 737 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 SNX6Q9UNH7 406 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 ERVK-11Q9UQG0 969 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 SNX8Q9Y5X2 465 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 SLC30A1Q9Y6M5 507 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 SYNJ2BP-COX16A0A087WUM0 186 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 SLC22A1O15245 554 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 MRPS14O60783 128 aaKnown RBP6.08□□□□□ -1.44
PTPRD-214ENST00000540109 PRKD3O94806 890 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 CCNB1P14635 433 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 TGM2P21980 687 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 CDK9P50750 372 aaKnown RBP6.08□□□□□ -1.44
PTPRD-214ENST00000540109 AP3S2P59780 193 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 RELAQ04206 551 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 QPRTQ15274 297 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 RHBDF2Q6PJF5 856 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 C6orf89Q6UWU4 347 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 TMC7Q7Z402 723 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 RAB43Q86YS6 212 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 TCP10LQ8TDR4 215 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 MSANTD3Q96H12 275 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 AIFM2Q9BRQ8 373 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 SYT17Q9BSW7 474 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 ZFYVE28Q9HCC9 887 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 ERVK-5Q9HDB9 667 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 SLC38A7Q9NVC3 462 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 C3orf18Q9UK00 162 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 ADAM28Q9UKQ2 775 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 CDV3Q9UKY7 258 aaKnown RBP6.08□□□□□ -1.44
PTPRD-214ENST00000540109 CNOT11Q9UKZ1 510 aaKnown RBP6.08□□□□□ -1.44
PTPRD-214ENST00000540109 POLIQ9UNA4 740 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 PTPRJQ12913 1337 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 hCG_1818297A0A087WSY0 165 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 A8MV72 311 aaPredicted RBP6.08□□□□□ -1.44
PTPRD-214ENST00000540109 K7EPI3 171 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 ATMINO43313 823 aaPredicted RBP6.08□□□□□ -1.44
PTPRD-214ENST00000540109 LIASO43766 372 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 PRPSAP2O60256 369 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 DHFRP00374 187 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 ANXA6P08133 673 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 RALAP11233 206 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 UBAP2LQ14157 1087 aaKnown RBP6.08□□□□□ -1.44
PTPRD-214ENST00000540109 AMHR2Q16671 573 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 SV2CQ496J9 727 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 ACSBG2Q5FVE4 666 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 GPR142Q7Z601 462 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 ALYREFQ86V81 257 aaKnown RBP6.08□□□□□ -1.44
PTPRD-214ENST00000540109 TREML1Q86YW5 311 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 LRRC71Q8N4P6 559 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 ART5Q96L15 291 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 TCF12Q99081 682 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 HERC2P3Q9BVR0 1158 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 CINPQ9BW66 212 aaPredicted RBP6.08□□□□□ -1.44
PTPRD-214ENST00000540109 CPNE5Q9HCH3 593 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 RCOR3Q9P2K3 495 aaPredicted RBP6.08□□□□□ -1.44
PTPRD-214ENST00000540109 MAGED1Q9Y5V3 778 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms