RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 TMEM121Q9BTD3 319 aa7.02□□□□□ -1.29
LPCAT3-209ENST00000540060 GBA3Q9H227 469 aa7.02□□□□□ -1.29
LPCAT3-209ENST00000540060 ARRDC1-AS1Q9H2J1 176 aa7.02□□□□□ -1.29
LPCAT3-209ENST00000540060 PCDH12Q9NPG4 1184 aa7.02□□□□□ -1.29
LPCAT3-209ENST00000540060 TMEM74BQ9NUR3 256 aa7.02□□□□□ -1.29
LPCAT3-209ENST00000540060 SMARCAL1Q9NZC9 954 aa7.02□□□□□ -1.29
LPCAT3-209ENST00000540060 NCDNQ9UBB6 729 aa7.02□□□□□ -1.29
LPCAT3-209ENST00000540060 RSPH14Q9UHP6 348 aa7.02□□□□□ -1.29
LPCAT3-209ENST00000540060 EIF2B4Q9UI10 523 aaKnown RBP7.02□□□□□ -1.29
LPCAT3-209ENST00000540060 TRHDEQ9UKU6 1024 aa7.02□□□□□ -1.29
LPCAT3-209ENST00000540060 TTC7AQ9ULT0 858 aaPredicted RBP7.02□□□□□ -1.29
LPCAT3-209ENST00000540060 ZKSCAN5Q9Y2L8 839 aa7.02□□□□□ -1.29
LPCAT3-209ENST00000540060 PPIL1Q9Y3C6 166 aa7.02□□□□□ -1.29
LPCAT3-209ENST00000540060 PCDHB9Q9Y5E1 797 aa7.02□□□□□ -1.29
LPCAT3-209ENST00000540060 RAI2Q9Y5P3 530 aa7.02□□□□□ -1.29
LPCAT3-209ENST00000540060 CACNA1EQ15878 2313 aa7.02□□□□□ -1.29
LPCAT3-209ENST00000540060 DCHS1Q96JQ0 3298 aa7.02□□□□□ -1.29
LPCAT3-209ENST00000540060 A0A0J9YYE9 177 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 KRTAP9-6A0A140TA67 174 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 CTAGE9A4FU28 777 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 C5orf60A6NFR6 353 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 CAPN8A6NHC0 703 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 NPIPB15A6NHN6 443 aaPredicted RBP7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 PATE3B3GLJ2 98 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 F5H423 210 aaPredicted RBP7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 NEMP1O14524 444 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 ZNF185O15231 689 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 OPHN1O60890 802 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 LRP3O75074 770 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 STK10O94804 968 aaKnown RBP7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 PCDH8O95206 1070 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 TRBC1P01850 177 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 ITGAVP06756 1048 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 ALPIP09923 528 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 TCP1P17987 556 aaKnown RBP7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 TGM1P22735 817 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 LHCGRP22888 699 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 XPAP23025 273 aaPredicted RBP7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 MAOBP27338 520 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 PSMB4P28070 264 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 MAT2AP31153 395 aaKnown RBP7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 NUDT1P36639 197 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 GRIA4P48058 902 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 RPL26P61254 145 aaKnown RBP7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 RPS21P63220 83 aaKnown RBP7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 SPEM2Q0P670 501 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 FGL2Q14314 439 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 CCDC6Q16204 474 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 CCNG2Q16589 344 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 LONRF2Q1L5Z9 754 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 TMEM52BQ4KMG9 183 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 SETMARQ53H47 684 aaPredicted RBP7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 ITPRIPL1Q6GPH6 555 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 NAPEPLDQ6IQ20 393 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 ERAP2Q6P179 960 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 KDELC1Q6UW63 502 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 NYAP1Q6ZVC0 841 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 USP45Q70EL2 814 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 PID1Q7Z2X4 250 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 RABEPKQ7Z6M1 372 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 KLHDC8BQ8IXV7 354 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 RGL4Q8IZJ4 473 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 ZCCHC9Q8N567 271 aaKnown RBP7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 DCLK2Q8N568 766 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 PAF1Q8N7H5 531 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 PRELID2Q8N945 189 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 FAM71DQ8N9W8 422 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 C12orf50Q8NA57 414 aaPredicted RBP7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 TMEM145Q8NBT3 493 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 LPCAT1Q8NF37 534 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 CCDC110Q8TBZ0 833 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 ACTRT1Q8TDG2 376 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 PIH1D2Q8WWB5 315 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 PIGKQ92643 395 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 FAM122AQ96E09 287 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 SCRN2Q96FV2 425 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 MS4A14Q96JA4 679 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 SLC6A18Q96N87 628 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 WRAP53Q9BUR4 548 aaKnown RBP7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 MLPHQ9BV36 600 aaPredicted RBP7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 C1QTNF2Q9BXJ5 285 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 MIR1-1HGQ9H1L0 117 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 SMOC1Q9H4F8 434 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 PCDH9Q9HC56 1237 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 TM9SF3Q9HD45 589 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 PARD6AQ9NPB6 346 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 VPS45Q9NRW7 570 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 UBP1Q9NZI7 540 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 B4GALT6Q9UBX8 382 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 SUSD2Q9UGT4 822 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 PHTF1Q9UMS5 762 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 RPL26L1Q9UNX3 145 aaKnown RBP7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 DMTF1Q9Y222 760 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 CHKBQ9Y259 395 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 ZFHX2Q9C0A1 2572 aaPredicted RBP7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 FAM186AA6NE01 2351 aa7.01□□□□□ -1.29
LPCAT3-209ENST00000540060 SPEGQ15772 3267 aa7□□□□□ -1.29
LPCAT3-209ENST00000540060 CEP250Q9BV73 2442 aa7□□□□□ -1.29
LPCAT3-209ENST00000540060 A0A1B0GTW7 788 aa7□□□□□ -1.29
LPCAT3-209ENST00000540060 LOC285095A0A1B0GVY8 99 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms