RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 ALPIP09923 528 aa19.01■□□□□ 0.63
TNFRSF1A-213ENST00000540022 TIMP2P16035 220 aa19.01■□□□□ 0.63
TNFRSF1A-213ENST00000540022 CTPS1P17812 591 aa19.01■□□□□ 0.63
TNFRSF1A-213ENST00000540022 ITGB7P26010 798 aa19.01■□□□□ 0.63
TNFRSF1A-213ENST00000540022 RPS9P46781 194 aaKnown RBP19.01■□□□□ 0.63
TNFRSF1A-213ENST00000540022 GRIA4P48058 902 aa19.01■□□□□ 0.63
TNFRSF1A-213ENST00000540022 NPY2RP49146 381 aa19.01■□□□□ 0.63
TNFRSF1A-213ENST00000540022 CRADDP78560 199 aa19.01■□□□□ 0.63
TNFRSF1A-213ENST00000540022 PDIA2Q13087 525 aaKnown RBP19.01■□□□□ 0.63
TNFRSF1A-213ENST00000540022 MTAPQ13126 283 aa19.01■□□□□ 0.63
TNFRSF1A-213ENST00000540022 CBLBQ13191 982 aa19.01■□□□□ 0.63
TNFRSF1A-213ENST00000540022 UGP2Q16851 508 aa19.01■□□□□ 0.63
TNFRSF1A-213ENST00000540022 LRRC73Q5JTD7 316 aa19.01■□□□□ 0.63
TNFRSF1A-213ENST00000540022 FAM46CQ5VWP2 391 aa19.01■□□□□ 0.63
TNFRSF1A-213ENST00000540022 DENND2CQ68D51 928 aa19.01■□□□□ 0.63
TNFRSF1A-213ENST00000540022 ZNF776Q68DI1 518 aaPredicted RBP19.01■□□□□ 0.63
TNFRSF1A-213ENST00000540022 CENPUQ71F23 418 aa19.01■□□□□ 0.63
TNFRSF1A-213ENST00000540022 TMPRSS6Q8IU80 811 aa19.01■□□□□ 0.63
TNFRSF1A-213ENST00000540022 MPP5Q8N3R9 675 aa19.01■□□□□ 0.63
TNFRSF1A-213ENST00000540022 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.01■□□□□ 0.63
TNFRSF1A-213ENST00000540022 WDR83Q9BRX9 315 aaKnown RBP19.01■□□□□ 0.63
TNFRSF1A-213ENST00000540022 BFARQ9NZS9 450 aa19.01■□□□□ 0.63
TNFRSF1A-213ENST00000540022 PPIL1Q9Y3C6 166 aa19.01■□□□□ 0.63
TNFRSF1A-213ENST00000540022 RIF1Q5UIP0 2472 aaKnown RBP19.01■□□□□ 0.63
TNFRSF1A-213ENST00000540022 A0A0J9YYE9 177 aa19■□□□□ 0.63
TNFRSF1A-213ENST00000540022 TCRBV21S2A2A0A5A6 115 aa19■□□□□ 0.63
TNFRSF1A-213ENST00000540022 MID1O15344 667 aa19■□□□□ 0.63
TNFRSF1A-213ENST00000540022 ATG13O75143 517 aa19■□□□□ 0.63
TNFRSF1A-213ENST00000540022 TRBC1P01850 177 aa19■□□□□ 0.63
TNFRSF1A-213ENST00000540022 FASTKD3Q14CZ7 662 aaKnown RBP19■□□□□ 0.63
TNFRSF1A-213ENST00000540022 HP1BP3Q5SSJ5 553 aaPredicted RBP19■□□□□ 0.63
TNFRSF1A-213ENST00000540022 PPP1R16AQ96I34 528 aa19■□□□□ 0.63
TNFRSF1A-213ENST00000540022 SAYSD1Q9NPB0 183 aa19■□□□□ 0.63
TNFRSF1A-213ENST00000540022 SYBUQ9NX95 663 aa19■□□□□ 0.63
TNFRSF1A-213ENST00000540022 SPO11Q9Y5K1 396 aa19■□□□□ 0.63
TNFRSF1A-213ENST00000540022 ZFHX2Q9C0A1 2572 aaPredicted RBP19■□□□□ 0.63
TNFRSF1A-213ENST00000540022 SDR42E2A6NKP2 422 aa19■□□□□ 0.63
TNFRSF1A-213ENST00000540022 EIF3HO15372 352 aaKnown RBP eCLIP19■□□□□ 0.63
TNFRSF1A-213ENST00000540022 ADH1BP00325 375 aa19■□□□□ 0.63
TNFRSF1A-213ENST00000540022 C7P10643 843 aa19■□□□□ 0.63
TNFRSF1A-213ENST00000540022 DRD3P35462 400 aa19■□□□□ 0.63
TNFRSF1A-213ENST00000540022 POLR2LP62875 67 aaKnown RBP19■□□□□ 0.63
TNFRSF1A-213ENST00000540022 POU6F1Q14863 301 aa19■□□□□ 0.63
TNFRSF1A-213ENST00000540022 DNAJC21Q5F1R6 531 aaKnown RBP19■□□□□ 0.63
TNFRSF1A-213ENST00000540022 TTC7BQ86TV6 843 aa19■□□□□ 0.63
TNFRSF1A-213ENST00000540022 IGDCC3Q8IVU1 814 aa19■□□□□ 0.63
TNFRSF1A-213ENST00000540022 AADATQ8N5Z0 425 aa19■□□□□ 0.63
TNFRSF1A-213ENST00000540022 BLOC1S5Q8TDH9 187 aa19■□□□□ 0.63
TNFRSF1A-213ENST00000540022 AENQ8WTP8 325 aaKnown RBP19■□□□□ 0.63
TNFRSF1A-213ENST00000540022 SCRN2Q96FV2 425 aa19■□□□□ 0.63
TNFRSF1A-213ENST00000540022 MRGPRX1Q96LB2 322 aa19■□□□□ 0.63
TNFRSF1A-213ENST00000540022 PHACTR1Q9C0D0 580 aa19■□□□□ 0.63
TNFRSF1A-213ENST00000540022 FAM186AA6NE01 2351 aa18.99■□□□□ 0.63
TNFRSF1A-213ENST00000540022 A0A0U1RQS6 177 aa18.99■□□□□ 0.63
TNFRSF1A-213ENST00000540022 UPK3BL1B0FP48 263 aa18.99■□□□□ 0.63
TNFRSF1A-213ENST00000540022 UPK3BL2E5RIL1 263 aa18.99■□□□□ 0.63
TNFRSF1A-213ENST00000540022 GABRG2P18507 467 aa18.99■□□□□ 0.63
TNFRSF1A-213ENST00000540022 NDUFV2P19404 249 aa18.99■□□□□ 0.63
TNFRSF1A-213ENST00000540022 C5AR1P21730 350 aa18.99■□□□□ 0.63
TNFRSF1A-213ENST00000540022 HNF1BP35680 557 aa18.99■□□□□ 0.63
TNFRSF1A-213ENST00000540022 ELK3P41970 407 aa18.99■□□□□ 0.63
TNFRSF1A-213ENST00000540022 ABL2P42684 1182 aa18.99■□□□□ 0.63
TNFRSF1A-213ENST00000540022 DGKEP52429 567 aa18.99■□□□□ 0.63
TNFRSF1A-213ENST00000540022 SEMG2Q02383 582 aa18.99■□□□□ 0.63
TNFRSF1A-213ENST00000540022 CCDC38Q502W7 563 aa18.99■□□□□ 0.63
TNFRSF1A-213ENST00000540022 ERN2Q76MJ5 926 aaKnown RBP18.99■□□□□ 0.63
TNFRSF1A-213ENST00000540022 ANKMY2Q8IV38 441 aa18.99■□□□□ 0.63
TNFRSF1A-213ENST00000540022 ZBED8Q8IZ13 594 aa18.99■□□□□ 0.63
TNFRSF1A-213ENST00000540022 MDGA1Q8NFP4 955 aa18.99■□□□□ 0.63
TNFRSF1A-213ENST00000540022 SIPA1Q96FS4 1042 aa18.99■□□□□ 0.63
TNFRSF1A-213ENST00000540022 MCCC1Q96RQ3 725 aaPredicted RBP18.99■□□□□ 0.63
TNFRSF1A-213ENST00000540022 IL22Q9GZX6 179 aa18.99■□□□□ 0.63
TNFRSF1A-213ENST00000540022 TSPYL1Q9H0U9 437 aa18.99■□□□□ 0.63
TNFRSF1A-213ENST00000540022 POLMQ9NP87 494 aaPredicted RBP18.99■□□□□ 0.63
TNFRSF1A-213ENST00000540022 DYRK4Q9NR20 520 aa18.99■□□□□ 0.63
TNFRSF1A-213ENST00000540022 TEX264Q9Y6I9 313 aa18.99■□□□□ 0.63
TNFRSF1A-213ENST00000540022 PTPRZ1P23471 2315 aaPredicted RBP18.98■□□□□ 0.63
TNFRSF1A-213ENST00000540022 CAPN8A6NHC0 703 aa18.98■□□□□ 0.63
TNFRSF1A-213ENST00000540022 NPIPB15A6NHN6 443 aaPredicted RBP18.98■□□□□ 0.63
TNFRSF1A-213ENST00000540022 AURKAO14965 403 aa18.98■□□□□ 0.63
TNFRSF1A-213ENST00000540022 NEK3P51956 506 aa18.98■□□□□ 0.63
TNFRSF1A-213ENST00000540022 CNTN1Q12860 1018 aa18.98■□□□□ 0.63
TNFRSF1A-213ENST00000540022 USP45Q70EL2 814 aa18.98■□□□□ 0.63
TNFRSF1A-213ENST00000540022 C1orf210Q8IVY1 113 aa18.98■□□□□ 0.63
TNFRSF1A-213ENST00000540022 NDUFAF2Q8N183 169 aa18.98■□□□□ 0.63
TNFRSF1A-213ENST00000540022 SPEM1Q8N4L4 309 aa18.98■□□□□ 0.63
TNFRSF1A-213ENST00000540022 FBXO36Q8NEA4 188 aa18.98■□□□□ 0.63
TNFRSF1A-213ENST00000540022 LRRC39Q96DD0 335 aa18.98■□□□□ 0.63
TNFRSF1A-213ENST00000540022 LYSMD1Q96S90 227 aa18.98■□□□□ 0.63
TNFRSF1A-213ENST00000540022 TRIM56Q9BRZ2 755 aaKnown RBP18.98■□□□□ 0.63
TNFRSF1A-213ENST00000540022 HDAC8Q9BY41 377 aa18.98■□□□□ 0.63
TNFRSF1A-213ENST00000540022 MAGEE1Q9HCI5 957 aa18.98■□□□□ 0.63
TNFRSF1A-213ENST00000540022 PCDH12Q9NPG4 1184 aa18.98■□□□□ 0.63
TNFRSF1A-213ENST00000540022 SERGEFQ9UGK8 458 aa18.98■□□□□ 0.63
TNFRSF1A-213ENST00000540022 CHMP2BQ9UQN3 213 aa18.98■□□□□ 0.63
TNFRSF1A-213ENST00000540022 MAD1L1Q9Y6D9 718 aa18.98■□□□□ 0.63
TNFRSF1A-213ENST00000540022 CKAP5Q14008 2032 aa18.98■□□□□ 0.63
TNFRSF1A-213ENST00000540022 A8MX80 341 aa18.97■□□□□ 0.63
TNFRSF1A-213ENST00000540022 SPINT1O43278 529 aa18.97■□□□□ 0.63
TNFRSF1A-213ENST00000540022 DNTTP04053 509 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms