RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 NEK3P51956 506 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 RPL26P61254 145 aaKnown RBP16.97■□□□□ 0.31
COPS3-212ENST00000539941 PPARDQ03181 441 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 HYAL1Q12794 435 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 TRAF2Q12933 501 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 DHCR24Q15392 516 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 SEPT7Q16181 437 aaKnown RBP16.97■□□□□ 0.31
COPS3-212ENST00000539941 FAM78AQ5JUQ0 283 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 GALNT7Q86SF2 657 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 RNF135Q8IUD6 432 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 BLOC1S5Q8TDH9 187 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 BPIFB1Q8TDL5 484 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 RMDN1Q96DB5 314 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 KLF6Q99612 283 aaPredicted RBP16.97■□□□□ 0.31
COPS3-212ENST00000539941 SLC24A3Q9HC58 644 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 HACD3Q9P035 362 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 FBXO10Q9UK96 956 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 RPL26L1Q9UNX3 145 aaKnown RBP16.97■□□□□ 0.31
COPS3-212ENST00000539941 VCANP13611 3396 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 ANKRD36A6QL64 1941 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 REV3LO60673 3130 aa16.96■□□□□ 0.31
COPS3-212ENST00000539941 CCDC78A2IDD5 438 aa16.96■□□□□ 0.31
COPS3-212ENST00000539941 K7ERQ8 282 aa16.96■□□□□ 0.31
COPS3-212ENST00000539941 HOXC11O43248 304 aaPredicted RBP16.96■□□□□ 0.31
COPS3-212ENST00000539941 SMAD6O43541 496 aaKnown RBP16.96■□□□□ 0.31
COPS3-212ENST00000539941 SOCS5O75159 536 aa16.96■□□□□ 0.31
COPS3-212ENST00000539941 SNUPNO95149 360 aaKnown RBP16.96■□□□□ 0.31
COPS3-212ENST00000539941 POLD2P49005 469 aa16.96■□□□□ 0.31
COPS3-212ENST00000539941 SERPINB8P50452 374 aa16.96■□□□□ 0.31
COPS3-212ENST00000539941 WDR4P57081 412 aaKnown RBP16.96■□□□□ 0.31
COPS3-212ENST00000539941 PDE1BQ01064 536 aa16.96■□□□□ 0.31
COPS3-212ENST00000539941 LRRC14Q15048 493 aa16.96■□□□□ 0.31
COPS3-212ENST00000539941 EML3Q32P44 896 aa16.96■□□□□ 0.31
COPS3-212ENST00000539941 ASTLQ6HA08 431 aaPredicted RBP16.96■□□□□ 0.31
COPS3-212ENST00000539941 AHI1Q8N157 1196 aa16.96■□□□□ 0.31
COPS3-212ENST00000539941 OR13J1Q8NGT2 312 aa16.96■□□□□ 0.31
COPS3-212ENST00000539941 TCP10LQ8TDR4 215 aa16.96■□□□□ 0.31
COPS3-212ENST00000539941 STYXQ8WUJ0 223 aa16.96■□□□□ 0.31
COPS3-212ENST00000539941 PTPRN2Q92932 1015 aa16.96■□□□□ 0.31
COPS3-212ENST00000539941 CHMP6Q96FZ7 201 aa16.96■□□□□ 0.31
COPS3-212ENST00000539941 MAGEB18Q96M61 343 aa16.96■□□□□ 0.31
COPS3-212ENST00000539941 LRRC3BQ96PB8 259 aa16.96■□□□□ 0.31
COPS3-212ENST00000539941 IQCGQ9H095 443 aaKnown RBP16.96■□□□□ 0.31
COPS3-212ENST00000539941 MFSD1Q9H3U5 465 aa16.96■□□□□ 0.31
COPS3-212ENST00000539941 RHOJQ9H4E5 214 aa16.96■□□□□ 0.31
COPS3-212ENST00000539941 EBF2Q9HAK2 575 aa16.96■□□□□ 0.31
COPS3-212ENST00000539941 PCDHGC4Q9Y5F7 938 aa16.96■□□□□ 0.31
COPS3-212ENST00000539941 SPTBN5Q9NRC6 3674 aaKnown RBP16.95■□□□□ 0.3
COPS3-212ENST00000539941 ANKRD66B4E2M5 251 aa16.95■□□□□ 0.3
COPS3-212ENST00000539941 DLL1O00548 723 aa16.95■□□□□ 0.3
COPS3-212ENST00000539941 FZD6O60353 706 aa16.95■□□□□ 0.3
COPS3-212ENST00000539941 NFATC1O95644 943 aa16.95■□□□□ 0.3
COPS3-212ENST00000539941 GSRP00390 522 aa16.95■□□□□ 0.3
COPS3-212ENST00000539941 CYP17A1P05093 508 aa16.95■□□□□ 0.3
COPS3-212ENST00000539941 SRCP12931 536 aa16.95■□□□□ 0.3
COPS3-212ENST00000539941 IGFBP4P22692 258 aa16.95■□□□□ 0.3
COPS3-212ENST00000539941 PSMA3P25788 255 aa16.95■□□□□ 0.3
COPS3-212ENST00000539941 MAGEA12P43365 314 aa16.95■□□□□ 0.3
COPS3-212ENST00000539941 VASPP50552 380 aaPredicted RBP16.95■□□□□ 0.3
COPS3-212ENST00000539941 SNRPD1P62314 119 aaKnown RBP16.95■□□□□ 0.3
COPS3-212ENST00000539941 TAF1AQ15573 450 aaPredicted RBP16.95■□□□□ 0.3
COPS3-212ENST00000539941 TCEAL5Q5H9L2 206 aa16.95■□□□□ 0.3
COPS3-212ENST00000539941 ATXN7L2Q5T6C5 722 aaPredicted RBP16.95■□□□□ 0.3
COPS3-212ENST00000539941 HHATQ5VTY9 493 aa16.95■□□□□ 0.3
COPS3-212ENST00000539941 NEPROQ6NW34 567 aa16.95■□□□□ 0.3
COPS3-212ENST00000539941 SYCE2Q6PIF2 218 aa16.95■□□□□ 0.3
COPS3-212ENST00000539941 PCDH20Q8N6Y1 951 aaKnown RBP16.95■□□□□ 0.3
COPS3-212ENST00000539941 C2CD4AQ8NCU7 369 aaPredicted RBP16.95■□□□□ 0.3
COPS3-212ENST00000539941 LPCAT1Q8NF37 534 aa16.95■□□□□ 0.3
COPS3-212ENST00000539941 OR2AP1Q8NGE2 309 aa16.95■□□□□ 0.3
COPS3-212ENST00000539941 SPOCK2Q92563 424 aa16.95■□□□□ 0.3
COPS3-212ENST00000539941 E2F7Q96AV8 911 aa16.95■□□□□ 0.3
COPS3-212ENST00000539941 RSPRY1Q96DX4 576 aa16.95■□□□□ 0.3
COPS3-212ENST00000539941 ZNF317Q96PQ6 595 aaPredicted RBP16.95■□□□□ 0.3
COPS3-212ENST00000539941 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.95■□□□□ 0.3
COPS3-212ENST00000539941 CFAP73A6NFT4 308 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 ZNF821O75541 412 aaPredicted RBP16.94■□□□□ 0.3
COPS3-212ENST00000539941 ALDOAP04075 364 aaKnown RBP16.94■□□□□ 0.3
COPS3-212ENST00000539941 ADH5P11766 374 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 POU3F3P20264 500 aaPredicted RBP16.94■□□□□ 0.3
COPS3-212ENST00000539941 CRHR1P34998 444 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 GRIA4P48058 902 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 PRAMEP78395 509 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 ECT2LQ008S8 904 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 ARMC12Q5T9G4 340 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 FSTL4Q6MZW2 842 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 C22orf39Q6P5X5 142 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 LVRNQ6Q4G3 990 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 GET4Q7L5D6 327 aaPredicted RBP16.94■□□□□ 0.3
COPS3-212ENST00000539941 ZC3HC1Q86WB0 502 aaKnown RBP16.94■□□□□ 0.3
COPS3-212ENST00000539941 PLPP6Q8IY26 295 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 WFIKKN2Q8TEU8 576 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 ATP2A3Q93084 1043 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 VPS39Q96JC1 886 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 TUBGCP5Q96RT8 1024 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 SRPK1Q96SB4 655 aaKnown RBP16.94■□□□□ 0.3
COPS3-212ENST00000539941 GPR22Q99680 433 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 TM6SF2Q9BZW4 377 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 ATP13A3Q9H7F0 1226 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 MLXIPLQ9NP71 852 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms