RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 LIG3P49916 1009 aa12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 EPHB1P54762 984 aa12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 WNT3AP56704 352 aa12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 CDK18Q07002 472 aa12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 SPEM2Q0P670 501 aa12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 MPP3Q13368 585 aa12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 PRPSAP1Q14558 356 aa12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 QPCTQ16769 361 aa12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 ARHGEF18Q6ZSZ5 1173 aa12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 ZCCHC9Q8N567 271 aaKnown RBP12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 GLIS1Q8NBF1 620 aa12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 C1orf216Q8TAB5 229 aa12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 RUBCNQ92622 972 aa12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 IFT43Q96FT9 208 aa12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 SCRN2Q96FV2 425 aa12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 MRGPRX2Q96LB1 330 aa12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 C16orf45Q96MC5 204 aaPredicted RBP12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 SLC6A18Q96N87 628 aa12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 TRIB3Q96RU7 358 aa12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 HINFPQ9BQA5 517 aa12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 MLPHQ9BV36 600 aaPredicted RBP12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 SLC17A9Q9BYT1 436 aa12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 FZD3Q9NPG1 666 aa12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 HOMER3Q9NSC5 361 aa12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 COQ6Q9Y2Z9 468 aa12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 MYO15AQ9UKN7 3530 aa12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 TMEM131Q92545 1883 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 MYLKQ15746 1914 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 DMDP11532 3685 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 A0A0U1RQS6 177 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 ANKRD66B4E2M5 251 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 SLC31A1O15431 190 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 GFRA3O60609 400 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 ANXA9O76027 345 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 TM7SF2O76062 418 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 PAK4O96013 591 aaPredicted RBP12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 IFNB1P01574 187 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 ZSCAN5DPP0CG00 497 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 CYP2A6P11509 494 aaPredicted RBP12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 C6P13671 934 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 LHCGRP22888 699 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 DPP6P42658 865 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 GRIA4P48058 902 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 GEMP55040 296 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 RPL26P61254 145 aaKnown RBP12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 CNGA3Q16281 694 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 CYP1B1Q16678 543 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 KCTD19Q17RG1 926 aaPredicted RBP12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 PARP6Q2NL67 630 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 P3H1Q32P28 736 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 SETMARQ53H47 684 aaPredicted RBP12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 PLA2G2CQ5R387 149 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 FAXCQ5TGI0 409 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 TTC27Q6P3X3 843 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 LIPIQ6XZB0 460 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 USP45Q70EL2 814 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 TSPAN33Q86UF1 283 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 CREG2Q8IUH2 290 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 NDUFAF2Q8N183 169 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 TAB3Q8N5C8 712 aaPredicted RBP12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 IPMKQ8NFU5 416 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 MAGOHBQ96A72 148 aaKnown RBP12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 RMDN1Q96DB5 314 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 SERAC1Q96JX3 654 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 MCCC1Q96RQ3 725 aaPredicted RBP12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 MYOCQ99972 504 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 C1QTNF2Q9BXJ5 285 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 ADGRE3Q9BY15 652 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 TM9SF3Q9HD45 589 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 PARD6AQ9NPB6 346 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 VPS45Q9NRW7 570 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 TPX2Q9ULW0 747 aaKnown RBP12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 RPL26L1Q9UNX3 145 aaKnown RBP12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 DMTF1Q9Y222 760 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 CA5BQ9Y2D0 317 aa12.76□□□□□ -0.37
TSPAN9-207ENST00000539631 A0A1B0GTW7 788 aa12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 LOC285095A0A1B0GVY8 99 aa12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 CAPN8A6NHC0 703 aa12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 GOLGA8CPA6NN73 597 aa12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 RAD51BO15315 384 aa12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 BCAT2O15382 392 aaPredicted RBP12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 LZTS3O60299 673 aaPredicted RBP12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 PHF2O75151 1096 aa12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 HEXIM1O94992 359 aaKnown RBP12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 NDST3O95803 873 aa12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 ELFN1P0C7U0 828 aa12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 GNSP15586 552 aa12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 GM2AP17900 193 aa12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 HNRNPA2B1P22626 353 aaKnown RBP12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 NFKBIAP25963 317 aa12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 RPL22P35268 128 aaKnown RBP12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 NUDT1P36639 197 aa12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 COILP38432 576 aaPredicted RBP12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 CHRNA4P43681 627 aa12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 SGCGQ13326 291 aa12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 OLIG2Q13516 323 aa12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 DUOXA1Q1HG43 343 aa12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 DENND2CQ68D51 928 aa12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 TCEAL6Q6IPX3 200 aa12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 NAPEPLDQ6IQ20 393 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms