RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 GALNT18Q6P9A2 607 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 ABHD15Q6UXT9 468 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.51□□□□□ -1.37
LSAMP-207ENST00000539563 SCAIQ8N9R8 606 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 PHF10Q8WUB8 498 aaKnown RBP6.51□□□□□ -1.37
LSAMP-207ENST00000539563 BTN2A3PQ96KV6 586 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 CORO1CQ9ULV4 474 aaPredicted RBP6.51□□□□□ -1.37
LSAMP-207ENST00000539563 RPL26L1Q9UNX3 145 aaKnown RBP6.51□□□□□ -1.37
LSAMP-207ENST00000539563 UNC5CO95185 931 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 CBX6O95503 412 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 ITGAXP20702 1163 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 KELP23276 732 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 CHN2P52757 468 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 ATP12AP54707 1039 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 PKNOX1P55347 436 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 GJC2Q5T442 439 aaPredicted RBP6.51□□□□□ -1.37
LSAMP-207ENST00000539563 C12orf29Q8N999 325 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 MAGEE2Q8TD90 523 aaPredicted RBP6.51□□□□□ -1.37
LSAMP-207ENST00000539563 HDAC10Q969S8 669 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 PTPRHQ9HD43 1115 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 RFXANKO14593 260 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 AP5B1Q2VPB7 878 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 CHSY3Q70JA7 882 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 CPA6Q8N4T0 437 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 COL26A1Q96A83 441 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 NDNQ99608 321 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.51□□□□□ -1.37
LSAMP-207ENST00000539563 TBC1D14Q9P2M4 693 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 SLC9A8Q9Y2E8 581 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 GMPPBQ9Y5P6 360 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 CNTNAP1P78357 1384 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 FSCN2O14926 492 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 MGRN1O60291 552 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 IFNA16P05015 189 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 SLC35G4P0C7Q5 338 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 CCNYL3P0C7X3 344 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 CD52P31358 61 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 MC4RP32245 332 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 TTMPQ5BVD1 217 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 ANKRD23Q86SG2 305 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 PRELID2Q8N945 189 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 GLIS3Q8NEA6 775 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 WDR60Q8WVS4 1066 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 PYDC1Q8WXC3 89 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 TM6SF2Q9BZW4 377 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 GPN3Q9UHW5 284 aaPredicted RBP6.5□□□□□ -1.37
LSAMP-207ENST00000539563 MRTO4Q9UKD2 239 aaKnown RBP6.5□□□□□ -1.37
LSAMP-207ENST00000539563 COG5Q9UP83 839 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 CACNB4O00305 520 aaPredicted RBP6.5□□□□□ -1.37
LSAMP-207ENST00000539563 ALOX15BO15296 676 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 TSC22D2O75157 780 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 FARP2O94887 1054 aaPredicted RBP6.5□□□□□ -1.37
LSAMP-207ENST00000539563 C4BPAP04003 597 aaKnown RBP6.5□□□□□ -1.37
LSAMP-207ENST00000539563 CYP3A5P20815 502 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 CRHR1P34998 444 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 RCVRNP35243 200 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 CCR4P51679 360 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 ELF3P78545 371 aaPredicted RBP6.5□□□□□ -1.37
LSAMP-207ENST00000539563 NRF1Q16656 503 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 MPPE1Q53F39 396 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 RGMBQ6NW40 437 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 KIAA1324Q6UXG2 1013 aaKnown RBP6.5□□□□□ -1.37
LSAMP-207ENST00000539563 FAM35AQ86V20 835 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 DENND6AQ8IWF6 608 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 VPS35Q96QK1 796 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 SNX15Q9NRS6 342 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.5□□□□□ -1.37
LSAMP-207ENST00000539563 KCTD5Q9NXV2 234 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 SUCOQ9UBS9 1254 aaKnown RBP6.5□□□□□ -1.37
LSAMP-207ENST00000539563 RAB23Q9ULC3 237 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 G3V2T6 193 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 GTPBP1O00178 669 aaKnown RBP6.5□□□□□ -1.37
LSAMP-207ENST00000539563 TLL1O43897 1013 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 ELFN1P0C7U0 828 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 TGFBR2P37173 567 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 PRKG2Q13237 762 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 GCNT7Q6ZNI0 430 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 PCDH20Q8N6Y1 951 aaKnown RBP6.5□□□□□ -1.37
LSAMP-207ENST00000539563 AMER2Q8N7J2 671 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 RNASE11Q8TAA1 199 aaKnown RBP6.5□□□□□ -1.37
LSAMP-207ENST00000539563 AP3S1Q92572 193 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 CLP1Q92989 425 aaKnown RBP6.5□□□□□ -1.37
LSAMP-207ENST00000539563 HTATIP2Q9BUP3 242 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 OSBPL11Q9BXB4 747 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 SLC4A5Q9BY07 1137 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 BPIFA1Q9NP55 256 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 SEMA3GQ9NS98 782 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 H3BNH8 94 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 SNPHO15079 494 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 PRMT3O60678 531 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 CLDN11O75508 207 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 ARF4P18085 180 aaPredicted RBP6.5□□□□□ -1.37
LSAMP-207ENST00000539563 FGFR3P22607 806 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 TM4SF1P30408 202 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 PSME3P61289 254 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 GALNT3Q14435 633 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 RFX4Q33E94 735 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 AAGABQ6PD74 315 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 C10orf107Q8IVU9 208 aa6.5□□□□□ -1.37
LSAMP-207ENST00000539563 PEX5LQ8IYB4 626 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms