RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 INTS11Q5TA45 600 aaKnown RBP9.71□□□□□ -0.85
CDH13-204ENST00000539548 RWDD4Q6NW29 188 aaKnown RBP9.71□□□□□ -0.85
CDH13-204ENST00000539548 LAYNQ6UX15 382 aa9.71□□□□□ -0.85
CDH13-204ENST00000539548 CYHR1Q6ZMK1 362 aa9.71□□□□□ -0.85
CDH13-204ENST00000539548 CTU1Q7Z7A3 348 aaKnown RBP9.71□□□□□ -0.85
CDH13-204ENST00000539548 TAC4Q86UU9 113 aa9.71□□□□□ -0.85
CDH13-204ENST00000539548 CROCCP3Q8IVE0 287 aa9.71□□□□□ -0.85
CDH13-204ENST00000539548 FUNDC1Q8IVP5 155 aa9.71□□□□□ -0.85
CDH13-204ENST00000539548 GOLM1Q8NBJ4 401 aa9.71□□□□□ -0.85
CDH13-204ENST00000539548 PCYOX1LQ8NBM8 494 aa9.71□□□□□ -0.85
CDH13-204ENST00000539548 GPRC5AQ8NFJ5 357 aa9.71□□□□□ -0.85
CDH13-204ENST00000539548 GABPB2Q8TAK5 448 aaPredicted RBP9.71□□□□□ -0.85
CDH13-204ENST00000539548 CANT1Q8WVQ1 401 aa9.71□□□□□ -0.85
CDH13-204ENST00000539548 TMEM40Q8WWA1 233 aa9.71□□□□□ -0.85
CDH13-204ENST00000539548 RNF34Q969K3 372 aa9.71□□□□□ -0.85
CDH13-204ENST00000539548 PPWD1Q96BP3 646 aaKnown RBP9.71□□□□□ -0.85
CDH13-204ENST00000539548 L3HYPDHQ96EM0 354 aa9.71□□□□□ -0.85
CDH13-204ENST00000539548 PCED1BQ96HM7 432 aa9.71□□□□□ -0.85
CDH13-204ENST00000539548 ZNF419Q96HQ0 510 aaPredicted RBP9.71□□□□□ -0.85
CDH13-204ENST00000539548 MRGPRX2Q96LB1 330 aa9.71□□□□□ -0.85
CDH13-204ENST00000539548 HOPXQ9BPY8 73 aaPredicted RBP9.71□□□□□ -0.85
CDH13-204ENST00000539548 GPATCH1Q9BRR8 931 aaKnown RBP9.71□□□□□ -0.85
CDH13-204ENST00000539548 NEU3Q9UQ49 428 aa9.71□□□□□ -0.85
CDH13-204ENST00000539548 TRIM64A6NGJ6 449 aa9.71□□□□□ -0.86
CDH13-204ENST00000539548 AQP12BA6NM10 295 aa9.71□□□□□ -0.86
CDH13-204ENST00000539548 ZNF839A8K0R7 811 aa9.71□□□□□ -0.86
CDH13-204ENST00000539548 SOCS2O14508 198 aa9.71□□□□□ -0.86
CDH13-204ENST00000539548 UBFD1O14562 309 aaKnown RBP9.71□□□□□ -0.86
CDH13-204ENST00000539548 PMPCBO75439 489 aa9.71□□□□□ -0.86
CDH13-204ENST00000539548 NELFEP18615 380 aaKnown RBP9.71□□□□□ -0.86
CDH13-204ENST00000539548 MYF6P23409 242 aa9.71□□□□□ -0.86
CDH13-204ENST00000539548 IGFBP6P24592 240 aaPredicted RBP9.71□□□□□ -0.86
CDH13-204ENST00000539548 HTR7P34969 479 aa9.71□□□□□ -0.86
CDH13-204ENST00000539548 SLC26A3P40879 764 aa9.71□□□□□ -0.86
CDH13-204ENST00000539548 NUP107P57740 925 aa9.71□□□□□ -0.86
CDH13-204ENST00000539548 MAP7D1Q3KQU3 841 aa9.71□□□□□ -0.86
CDH13-204ENST00000539548 ZBED5Q49AG3 693 aa9.71□□□□□ -0.86
CDH13-204ENST00000539548 ZNF789Q5FWF6 425 aa9.71□□□□□ -0.86
CDH13-204ENST00000539548 IQSEC1Q6DN90 963 aa9.71□□□□□ -0.86
CDH13-204ENST00000539548 PRMT9Q6P2P2 845 aa9.71□□□□□ -0.86
CDH13-204ENST00000539548 MOB2Q70IA6 237 aa9.71□□□□□ -0.86
CDH13-204ENST00000539548 RPS27LQ71UM5 84 aaKnown RBP9.71□□□□□ -0.86
CDH13-204ENST00000539548 GALNT7Q86SF2 657 aa9.71□□□□□ -0.86
CDH13-204ENST00000539548 CAMK1DQ8IU85 385 aa9.71□□□□□ -0.86
CDH13-204ENST00000539548 RNF135Q8IUD6 432 aa9.71□□□□□ -0.86
CDH13-204ENST00000539548 AQP12AQ8IXF9 295 aa9.71□□□□□ -0.86
CDH13-204ENST00000539548 SCML4Q8N228 414 aa9.71□□□□□ -0.86
CDH13-204ENST00000539548 DNAJB3Q8WWF6 145 aa9.71□□□□□ -0.86
CDH13-204ENST00000539548 SMARCD1Q96GM5 515 aa9.71□□□□□ -0.86
CDH13-204ENST00000539548 SLC39A8Q9C0K1 460 aa9.71□□□□□ -0.86
CDH13-204ENST00000539548 ARNT2Q9HBZ2 717 aa9.71□□□□□ -0.86
CDH13-204ENST00000539548 CSNK1G1Q9HCP0 422 aa9.71□□□□□ -0.86
CDH13-204ENST00000539548 CDH9Q9ULB4 789 aa9.71□□□□□ -0.86
CDH13-204ENST00000539548 NDUFAF1Q9Y375 327 aa9.71□□□□□ -0.86
CDH13-204ENST00000539548 TLL2Q9Y6L7 1015 aa9.71□□□□□ -0.86
CDH13-204ENST00000539548 CROCCQ5TZA2 2017 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 FGF10O15520 208 aaPredicted RBP9.7□□□□□ -0.86
CDH13-204ENST00000539548 AKAP10O43572 662 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 WISP3O95389 354 aaPredicted RBP9.7□□□□□ -0.86
CDH13-204ENST00000539548 IGLV3-25P01717 112 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 HLA-DQB2P05538 268 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 ATP6V1B2P21281 511 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 YWHAQP27348 245 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 HOXC13P31276 330 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 GRIA3P42263 894 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 GALK1P51570 392 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 NME5P56597 212 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 STX1BP61266 288 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 ESRRGP62508 458 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 EIF4EBP2Q13542 120 aaPredicted RBP9.7□□□□□ -0.86
CDH13-204ENST00000539548 SEPT6Q14141 434 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 UGT3A2Q3SY77 523 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 MINDY1Q8N5J2 469 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 FAM47BQ8NA70 645 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 OR9I1Q8NGQ6 314 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 DQX1Q8TE96 717 aaKnown RBP9.7□□□□□ -0.86
CDH13-204ENST00000539548 GTF3C2Q8WUA4 911 aaPredicted RBP9.7□□□□□ -0.86
CDH13-204ENST00000539548 PHF21BQ96EK2 531 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 FSD1LQ9BXM9 530 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 TRIM15Q9C019 465 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 SIK2Q9H0K1 926 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 TSPYL2Q9H2G4 693 aaPredicted RBP9.7□□□□□ -0.86
CDH13-204ENST00000539548 PLGRKTQ9HBL7 147 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 TBC1D13Q9NVG8 400 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 RBM22Q9NW64 420 aaKnown RBP eCLIP9.7□□□□□ -0.86
CDH13-204ENST00000539548 MAP10Q9P2G4 905 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 ABCD2Q9UBJ2 740 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 ZNHIT2Q9UHR6 403 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 VWA7Q9Y334 891 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 MIA3Q5JRA6 1907 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 DICER1Q9UPY3 1922 aaKnown RBP9.7□□□□□ -0.86
CDH13-204ENST00000539548 NYNRINQ9P2P1 1898 aaKnown RBP9.7□□□□□ -0.86
CDH13-204ENST00000539548 NME4O00746 187 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 DLGAP1O14490 977 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 MYL3P08590 195 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 FGF4P08620 206 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 HSD17B1P14061 328 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 IL10P22301 178 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 CHRNA4P43681 627 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 PLK1P53350 603 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms