RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 OGFRQ9NZT2 677 aa17.34■□□□□ 0.37
CLN6-202ENST00000538696 RAI2Q9Y5P3 530 aa17.34■□□□□ 0.37
CLN6-202ENST00000538696 TEX264Q9Y6I9 313 aa17.34■□□□□ 0.37
CLN6-202ENST00000538696 PLK4O00444 970 aa17.33■□□□□ 0.36
CLN6-202ENST00000538696 KPNA3O00505 521 aaPredicted RBP17.33■□□□□ 0.36
CLN6-202ENST00000538696 OPA1O60313 960 aa17.33■□□□□ 0.36
CLN6-202ENST00000538696 USP12O75317 370 aa17.33■□□□□ 0.36
CLN6-202ENST00000538696 PMPCBO75439 489 aa17.33■□□□□ 0.36
CLN6-202ENST00000538696 APBB3O95704 486 aa17.33■□□□□ 0.36
CLN6-202ENST00000538696 ADH1BP00325 375 aa17.33■□□□□ 0.36
CLN6-202ENST00000538696 MLNP12872 115 aa17.33■□□□□ 0.36
CLN6-202ENST00000538696 AVPR2P30518 371 aa17.33■□□□□ 0.36
CLN6-202ENST00000538696 SLC8A1P32418 973 aa17.33■□□□□ 0.36
CLN6-202ENST00000538696 GEMP55040 296 aa17.33■□□□□ 0.36
CLN6-202ENST00000538696 EIF3BP55884 814 aaKnown RBP17.33■□□□□ 0.36
CLN6-202ENST00000538696 SARNPP82979 210 aaKnown RBP17.33■□□□□ 0.36
CLN6-202ENST00000538696 PCSK7Q16549 785 aa17.33■□□□□ 0.36
CLN6-202ENST00000538696 ZNF805Q5CZA5 627 aa17.33■□□□□ 0.36
CLN6-202ENST00000538696 FAM46CQ5VWP2 391 aa17.33■□□□□ 0.36
CLN6-202ENST00000538696 KRT222Q8N1A0 295 aa17.33■□□□□ 0.36
CLN6-202ENST00000538696 MPP5Q8N3R9 675 aa17.33■□□□□ 0.36
CLN6-202ENST00000538696 AADATQ8N5Z0 425 aa17.33■□□□□ 0.36
CLN6-202ENST00000538696 OR52K1Q8NGK4 314 aa17.33■□□□□ 0.36
CLN6-202ENST00000538696 ECHDC3Q96DC8 303 aa17.33■□□□□ 0.36
CLN6-202ENST00000538696 SIPA1Q96FS4 1042 aa17.33■□□□□ 0.36
CLN6-202ENST00000538696 CFAP36Q96G28 342 aa17.33■□□□□ 0.36
CLN6-202ENST00000538696 ZNF641Q96N77 438 aaPredicted RBP17.33■□□□□ 0.36
CLN6-202ENST00000538696 SUV39H2Q9H5I1 410 aa17.33■□□□□ 0.36
CLN6-202ENST00000538696 MED4Q9NPJ6 270 aa17.33■□□□□ 0.36
CLN6-202ENST00000538696 CD93Q9NPY3 652 aa17.33■□□□□ 0.36
CLN6-202ENST00000538696 VPS45Q9NRW7 570 aa17.33■□□□□ 0.36
CLN6-202ENST00000538696 LRRK1Q38SD2 2015 aa17.32■□□□□ 0.36
CLN6-202ENST00000538696 ERI2A8K979 691 aaKnown RBP17.32■□□□□ 0.36
CLN6-202ENST00000538696 PSMD3O43242 534 aa17.32■□□□□ 0.36
CLN6-202ENST00000538696 FZD6O60353 706 aa17.32■□□□□ 0.36
CLN6-202ENST00000538696 ANXA9O76027 345 aa17.32■□□□□ 0.36
CLN6-202ENST00000538696 ALDH1A2O94788 518 aa17.32■□□□□ 0.36
CLN6-202ENST00000538696 CPP00450 1065 aa17.32■□□□□ 0.36
CLN6-202ENST00000538696 TDGF1P13385 188 aa17.32■□□□□ 0.36
CLN6-202ENST00000538696 C5AR1P21730 350 aa17.32■□□□□ 0.36
CLN6-202ENST00000538696 ITGB7P26010 798 aa17.32■□□□□ 0.36
CLN6-202ENST00000538696 DRD3P35462 400 aa17.32■□□□□ 0.36
CLN6-202ENST00000538696 WNT3AP56704 352 aa17.32■□□□□ 0.36
CLN6-202ENST00000538696 SESN2P58004 480 aaPredicted RBP17.32■□□□□ 0.36
CLN6-202ENST00000538696 MPP3Q13368 585 aa17.32■□□□□ 0.36
CLN6-202ENST00000538696 NUMA1Q14980 2115 aa17.32■□□□□ 0.36
CLN6-202ENST00000538696 KRT71Q3SY84 523 aa17.32■□□□□ 0.36
CLN6-202ENST00000538696 HSP90B2PQ58FF3 399 aa17.32■□□□□ 0.36
CLN6-202ENST00000538696 TTMPQ5BVD1 217 aa17.32■□□□□ 0.36
CLN6-202ENST00000538696 MAML2Q8IZL2 1156 aaPredicted RBP17.32■□□□□ 0.36
CLN6-202ENST00000538696 IPMKQ8NFU5 416 aa17.32■□□□□ 0.36
CLN6-202ENST00000538696 MRGPRX2Q96LB1 330 aa17.32■□□□□ 0.36
CLN6-202ENST00000538696 SIGLEC10Q96LC7 697 aa17.32■□□□□ 0.36
CLN6-202ENST00000538696 PPP1R2P1Q96PQ5 205 aa17.32■□□□□ 0.36
CLN6-202ENST00000538696 TRIB3Q96RU7 358 aa17.32■□□□□ 0.36
CLN6-202ENST00000538696 APOL2Q9BQE5 337 aa17.32■□□□□ 0.36
CLN6-202ENST00000538696 LRRC40Q9H9A6 602 aa17.32■□□□□ 0.36
CLN6-202ENST00000538696 TMBIM4Q9HC24 238 aa17.32■□□□□ 0.36
CLN6-202ENST00000538696 CASS4Q9NQ75 786 aa17.32■□□□□ 0.36
CLN6-202ENST00000538696 BCCIPQ9P287 314 aaKnown RBP eCLIP17.32■□□□□ 0.36
CLN6-202ENST00000538696 DKK3Q9UBP4 350 aa17.32■□□□□ 0.36
CLN6-202ENST00000538696 SERGEFQ9UGK8 458 aa17.32■□□□□ 0.36
CLN6-202ENST00000538696 CHKBQ9Y259 395 aa17.32■□□□□ 0.36
CLN6-202ENST00000538696 ZNF318Q5VUA4 2279 aa17.32■□□□□ 0.36
CLN6-202ENST00000538696 A0A087WUV0 522 aaPredicted RBP17.31■□□□□ 0.36
CLN6-202ENST00000538696 A0A1W2PP55 124 aa17.31■□□□□ 0.36
CLN6-202ENST00000538696 GOLGA6CA6NDK9 693 aa17.31■□□□□ 0.36
CLN6-202ENST00000538696 SMIM23A6NLE4 172 aa17.31■□□□□ 0.36
CLN6-202ENST00000538696 C16orf96A6NNT2 1141 aa17.31■□□□□ 0.36
CLN6-202ENST00000538696 PRR33A8MZF0 331 aa17.31■□□□□ 0.36
CLN6-202ENST00000538696 LAMTOR5O43504 91 aa17.31■□□□□ 0.36
CLN6-202ENST00000538696 GPR37L1O60883 481 aa17.31■□□□□ 0.36
CLN6-202ENST00000538696 PGLSO95336 258 aa17.31■□□□□ 0.36
CLN6-202ENST00000538696 PRLP01236 227 aa17.31■□□□□ 0.36
CLN6-202ENST00000538696 DNTTP04053 509 aa17.31■□□□□ 0.36
CLN6-202ENST00000538696 PDHA1P08559 390 aa17.31■□□□□ 0.36
CLN6-202ENST00000538696 GOLGA6DP0CG33 693 aa17.31■□□□□ 0.36
CLN6-202ENST00000538696 MGAT1P26572 445 aa17.31■□□□□ 0.36
CLN6-202ENST00000538696 SSTR1P30872 391 aa17.31■□□□□ 0.36
CLN6-202ENST00000538696 PXNP49023 591 aaPredicted RBP17.31■□□□□ 0.36
CLN6-202ENST00000538696 ZBTB16Q05516 673 aa17.31■□□□□ 0.36
CLN6-202ENST00000538696 DMWDQ09019 674 aa17.31■□□□□ 0.36
CLN6-202ENST00000538696 ARMC12Q5T9G4 340 aa17.31■□□□□ 0.36
CLN6-202ENST00000538696 TSSK4Q6SA08 328 aa17.31■□□□□ 0.36
CLN6-202ENST00000538696 C1orf210Q8IVY1 113 aa17.31■□□□□ 0.36
CLN6-202ENST00000538696 PGBD3Q8N328 593 aa17.31■□□□□ 0.36
CLN6-202ENST00000538696 CAMKK1Q8N5S9 505 aa17.31■□□□□ 0.36
CLN6-202ENST00000538696 EPS8L3Q8TE67 593 aaKnown RBP17.31■□□□□ 0.36
CLN6-202ENST00000538696 PDCD6IPQ8WUM4 868 aaKnown RBP17.31■□□□□ 0.36
CLN6-202ENST00000538696 PPP1R16AQ96I34 528 aa17.31■□□□□ 0.36
CLN6-202ENST00000538696 FEM1CQ96JP0 617 aa17.31■□□□□ 0.36
CLN6-202ENST00000538696 FICDQ9BVA6 458 aa17.31■□□□□ 0.36
CLN6-202ENST00000538696 TMEM109Q9BVC6 243 aa17.31■□□□□ 0.36
CLN6-202ENST00000538696 TPSD1Q9BZJ3 242 aa17.31■□□□□ 0.36
CLN6-202ENST00000538696 PLAC1Q9HBJ0 212 aa17.31■□□□□ 0.36
CLN6-202ENST00000538696 SYBUQ9NX95 663 aa17.31■□□□□ 0.36
CLN6-202ENST00000538696 GOLGA6AQ9NYA3 693 aa17.31■□□□□ 0.36
CLN6-202ENST00000538696 EBF1Q9UH73 591 aa17.31■□□□□ 0.36
CLN6-202ENST00000538696 AAR2Q9Y312 384 aaKnown RBP17.31■□□□□ 0.36
CLN6-202ENST00000538696 TSHRP16473 764 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms