RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 CNTN4Q8IWV2 1026 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 ANKRD49Q8WVL7 239 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 ALG14Q96F25 216 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 TDRD1Q9BXT4 1180 aaKnown RBP14.19□□□□□ -0.14
ACTN1-205ENST00000538545 MCOLN1Q9GZU1 580 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 PCDHB9Q9Y5E1 797 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 OR51B4Q9Y5P0 310 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 TRIOO75962 3097 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 CHRNGP07510 517 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 MAGEA9P43362 315 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 SLC1A6P48664 564 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 PLK1P53350 603 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 CDKN2DP55273 166 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 RHOAP61586 193 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 LMAN2Q12907 356 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 BNIP1Q12981 228 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 CHST9Q7L1S5 443 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 TMEM25Q86YD3 366 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 FATE1Q969F0 183 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 ISL2Q96A47 359 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 CCDC97Q96F63 343 aaPredicted RBP14.19□□□□□ -0.14
ACTN1-205ENST00000538545 FEM1CQ96JP0 617 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 SORT1Q99523 831 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 XPR1Q9UBH6 696 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 LHX3Q9UBR4 397 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 EVLQ9UI08 416 aaPredicted RBP14.19□□□□□ -0.14
ACTN1-205ENST00000538545 ATXN2Q99700 1313 aaKnown RBP14.19□□□□□ -0.14
ACTN1-205ENST00000538545 MTCL1Q9Y4B5 1905 aaKnown RBP14.19□□□□□ -0.14
ACTN1-205ENST00000538545 SNNO75324 88 aaPredicted RBP14.19□□□□□ -0.14
ACTN1-205ENST00000538545 MOSPD3O75425 235 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 RALBP11234 206 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 STMN1P16949 149 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 WEE1P30291 646 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 LRRC73Q5JTD7 316 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 TMEM207Q6UWW9 146 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 GRASPQ7Z6J2 395 aaPredicted RBP14.19□□□□□ -0.14
ACTN1-205ENST00000538545 FSBPO95073 299 aa14.18□□□□□ -0.14
ACTN1-205ENST00000538545 NDST3O95803 873 aa14.18□□□□□ -0.14
ACTN1-205ENST00000538545 CA3P07451 260 aa14.18□□□□□ -0.14
ACTN1-205ENST00000538545 RAB10P61026 200 aa14.18□□□□□ -0.14
ACTN1-205ENST00000538545 FRG1Q14331 258 aaKnown RBP14.18□□□□□ -0.14
ACTN1-205ENST00000538545 ASTLQ6HA08 431 aaPredicted RBP14.18□□□□□ -0.14
ACTN1-205ENST00000538545 GLT6D1Q7Z4J2 308 aa14.18□□□□□ -0.14
ACTN1-205ENST00000538545 BBS5Q8N3I7 341 aa14.18□□□□□ -0.14
ACTN1-205ENST00000538545 NAT16Q8N8M0 369 aa14.18□□□□□ -0.14
ACTN1-205ENST00000538545 HJURPQ8NCD3 748 aaPredicted RBP14.18□□□□□ -0.14
ACTN1-205ENST00000538545 APOL5Q9BWW9 433 aa14.18□□□□□ -0.14
ACTN1-205ENST00000538545 NMUR2Q9GZQ4 415 aa14.18□□□□□ -0.14
ACTN1-205ENST00000538545 CYP4F12Q9HCS2 524 aa14.18□□□□□ -0.14
ACTN1-205ENST00000538545 STOML2Q9UJZ1 356 aa14.18□□□□□ -0.14
ACTN1-205ENST00000538545 A8MUI8 341 aa14.18□□□□□ -0.14
ACTN1-205ENST00000538545 FGF1P05230 155 aa14.18□□□□□ -0.14
ACTN1-205ENST00000538545 RHOP08100 348 aa14.18□□□□□ -0.14
ACTN1-205ENST00000538545 T-ENOLP0DO92 83 aa14.18□□□□□ -0.14
ACTN1-205ENST00000538545 PPP3CCP48454 512 aa14.18□□□□□ -0.14
ACTN1-205ENST00000538545 ATG16L1Q676U5 607 aa14.18□□□□□ -0.14
ACTN1-205ENST00000538545 PACS2Q86VP3 889 aa14.18□□□□□ -0.14
ACTN1-205ENST00000538545 HEXDCQ8WVB3 486 aa14.18□□□□□ -0.14
ACTN1-205ENST00000538545 EID2BQ96D98 161 aa14.18□□□□□ -0.14
ACTN1-205ENST00000538545 PRKD2Q9BZL6 878 aa14.18□□□□□ -0.14
ACTN1-205ENST00000538545 MRM3Q9HC36 420 aaKnown RBP14.18□□□□□ -0.14
ACTN1-205ENST00000538545 ABCB8Q9NUT2 735 aa14.18□□□□□ -0.14
ACTN1-205ENST00000538545 ZFP69BQ9UJL9 534 aa14.18□□□□□ -0.14
ACTN1-205ENST00000538545 TRAV19A0A0A6YYK7 116 aa14.17□□□□□ -0.14
ACTN1-205ENST00000538545 GFRA2O00451 464 aa14.17□□□□□ -0.14
ACTN1-205ENST00000538545 S1PR4O95977 384 aa14.17□□□□□ -0.14
ACTN1-205ENST00000538545 HLA-DPA1P20036 260 aa14.17□□□□□ -0.14
ACTN1-205ENST00000538545 KCNA5P22460 613 aa14.17□□□□□ -0.14
ACTN1-205ENST00000538545 HLA-FP30511 346 aa14.17□□□□□ -0.14
ACTN1-205ENST00000538545 CPA2P48052 419 aa14.17□□□□□ -0.14
ACTN1-205ENST00000538545 TNK2Q07912 1038 aa14.17□□□□□ -0.14
ACTN1-205ENST00000538545 FBXO48Q5FWF7 155 aa14.17□□□□□ -0.14
ACTN1-205ENST00000538545 ZNF549Q6P9A3 640 aa14.17□□□□□ -0.14
ACTN1-205ENST00000538545 MAVSQ7Z434 540 aa14.17□□□□□ -0.14
ACTN1-205ENST00000538545 ADGRD2Q7Z7M1 963 aa14.17□□□□□ -0.14
ACTN1-205ENST00000538545 PAF1Q8N7H5 531 aa14.17□□□□□ -0.14
ACTN1-205ENST00000538545 ZNF781Q8N8C0 355 aa14.17□□□□□ -0.14
ACTN1-205ENST00000538545 BRSK1Q8TDC3 778 aa14.17□□□□□ -0.14
ACTN1-205ENST00000538545 PTCD2Q8WV60 388 aaKnown RBP14.17□□□□□ -0.14
ACTN1-205ENST00000538545 ERLEC1Q96DZ1 483 aa14.17□□□□□ -0.14
ACTN1-205ENST00000538545 CDKN2AIPNLQ96HQ2 116 aa14.17□□□□□ -0.14
ACTN1-205ENST00000538545 ZNF599Q96NL3 588 aa14.17□□□□□ -0.14
ACTN1-205ENST00000538545 TSR3Q9UJK0 312 aaKnown RBP14.17□□□□□ -0.14
ACTN1-205ENST00000538545 LSM7Q9UK45 103 aaKnown RBP14.17□□□□□ -0.14
ACTN1-205ENST00000538545 STK38LQ9Y2H1 464 aa14.17□□□□□ -0.14
ACTN1-205ENST00000538545 ACOT9Q9Y305 439 aa14.17□□□□□ -0.14
ACTN1-205ENST00000538545 UBA6A0AVT1 1052 aaPredicted RBP14.17□□□□□ -0.14
ACTN1-205ENST00000538545 NEDD8-MDP1E9PL57 170 aa14.17□□□□□ -0.14
ACTN1-205ENST00000538545 KLF11O14901 512 aa14.17□□□□□ -0.14
ACTN1-205ENST00000538545 CSRP3P50461 194 aa14.17□□□□□ -0.14
ACTN1-205ENST00000538545 ZBTB16Q05516 673 aa14.17□□□□□ -0.14
ACTN1-205ENST00000538545 ALG1LQ6GMV1 187 aa14.17□□□□□ -0.14
ACTN1-205ENST00000538545 CCDC149Q6ZUS6 474 aa14.17□□□□□ -0.14
ACTN1-205ENST00000538545 CRLF3Q8IUI8 442 aa14.17□□□□□ -0.14
ACTN1-205ENST00000538545 ELMOD1Q8N336 334 aa14.17□□□□□ -0.14
ACTN1-205ENST00000538545 RYBPQ8N488 228 aaPredicted RBP14.17□□□□□ -0.14
ACTN1-205ENST00000538545 USP13Q92995 863 aaPredicted RBP14.17□□□□□ -0.14
ACTN1-205ENST00000538545 EXT2Q93063 718 aa14.17□□□□□ -0.14
ACTN1-205ENST00000538545 GPR78Q96P69 363 aa14.17□□□□□ -0.14
ACTN1-205ENST00000538545 GATA5Q9BWX5 397 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms