RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 ALS2CLQ60I27 953 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 PKN3Q6P5Z2 889 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 BRAT1Q6PJG6 821 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 SFTPA1Q8IWL2 248 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 GJD3Q8N144 294 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 TMIEQ8NEW7 156 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 OR6P1Q8NGX9 317 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 RPLP0P6Q8NHW5 317 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 PIP4K2CQ8TBX8 421 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 FRS2Q8WU20 508 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 ANKRD7Q92527 254 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 PTPRN2Q92932 1015 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 MRRFQ96E11 262 aaKnown RBP10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 ZNF419Q96HQ0 510 aaPredicted RBP10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 ASB2Q96Q27 587 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 ACOX2Q99424 681 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 OMDQ99983 421 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 GORASP1Q9BQQ3 440 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 COL25A1Q9BXS0 654 aaPredicted RBP10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 LMAN1LQ9HAT1 526 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 POLMQ9NP87 494 aaPredicted RBP10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 NINJ2Q9NZG7 142 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 BCCIPQ9P287 314 aaKnown RBP eCLIP10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 PLAAQ9Y263 795 aa10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 FNDC3AQ9Y2H6 1198 aaKnown RBP10.72□□□□□ -0.69
TNFRSF1A-211ENST00000538363 C1orf232A0A0U1RR37 186 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 EXOC1LA0A1B0GW35 172 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 FAM170BA6NMN3 283 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 ANKRD36A6QL64 1941 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 POC1B-GALNT4F8VUJ3 575 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 RIPK2O43353 540 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 OPA1O60313 960 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 PDHA1P08559 390 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 TSHRP16473 764 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 LPOP22079 712 aaPredicted RBP10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 SSTR1P30872 391 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 EIF3BP55884 814 aaKnown RBP10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 SLC29A2Q14542 456 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 QPCTQ16769 361 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 KLHL38Q2WGJ6 581 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 HSF5Q4G112 596 aaPredicted RBP10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 SPDYCQ5MJ68 293 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 C9orf64Q5T6V5 341 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 ZNF776Q68DI1 518 aaPredicted RBP10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 CES3Q6UWW8 571 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 KIAA1324Q6UXG2 1013 aaKnown RBP10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 CROCCP2Q86T23 111 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 RASSF3Q86WH2 238 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 CACUL1Q86Y37 369 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 SIX5Q8N196 739 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 MPP5Q8N3R9 675 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 FLCNQ8NFG4 579 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 OR2T3Q8NH03 318 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 GSDMBQ8TAX9 411 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 BRSK1Q8TDC3 778 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 PBXIP1Q96AQ6 731 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 SIGLEC10Q96LC7 697 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 TMEM245Q9H330 911 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 TRABDQ9H4I3 376 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 FBRSQ9HAH7 460 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 ARNT2Q9HBZ2 717 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 PRSS16Q9NQE7 514 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 CHRAC1Q9NRG0 131 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 C20orf96Q9NUD7 363 aaPredicted RBP10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 SOX13Q9UN79 622 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 TCAF1Q9Y4C2 921 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 TEX264Q9Y6I9 313 aa10.71□□□□□ -0.69
TNFRSF1A-211ENST00000538363 CUL9Q8IWT3 2517 aa10.71□□□□□ -0.7
TNFRSF1A-211ENST00000538363 KIAA1549LQ6ZVL6 1849 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 FAM237BA0A1B0GVD1 139 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 C16orf96A6NNT2 1141 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 UPK3BL1B0FP48 263 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 UPK3BL2E5RIL1 263 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 E7ESA3 106 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 PFDN6O15212 129 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 HTRA2O43464 458 aaPredicted RBP10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 BUD23O43709 281 aaKnown RBP10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ZNF821O75541 412 aaPredicted RBP10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ALDH1A2O94788 518 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ADH1BP00325 375 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 PRKCGP05129 697 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ALPIP09923 528 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 MYZAPP0CAP1 466 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 MSH2P43246 934 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ELP6Q0PNE2 266 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 STAT4Q14765 748 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 FASTKD3Q14CZ7 662 aaKnown RBP10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TAF1AQ15573 450 aaPredicted RBP10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 LONRF1Q17RB8 773 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TTC31Q49AM3 519 aaPredicted RBP10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ANKRD20A4Q4UJ75 823 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 CEP85LQ5SZL2 805 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TSTD2Q5T7W7 516 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 LGSNQ5TDP6 509 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ZNF534Q76KX8 674 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TAOK1Q7L7X3 1001 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 RELL1Q8IUW5 271 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 MREGQ8N565 214 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms