RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 CCDC15Q0P6D6 951 aa8.45□□□□□ -1.06
SPARC-208ENST00000538026 OVGP1Q12889 678 aa8.45□□□□□ -1.06
SPARC-208ENST00000538026 AGERQ15109 404 aa8.45□□□□□ -1.06
SPARC-208ENST00000538026 IRF4Q15306 451 aa8.45□□□□□ -1.06
SPARC-208ENST00000538026 CNGA3Q16281 694 aa8.45□□□□□ -1.06
SPARC-208ENST00000538026 IFI16Q16666 785 aaKnown RBP8.45□□□□□ -1.06
SPARC-208ENST00000538026 CDKN3Q16667 212 aa8.45□□□□□ -1.06
SPARC-208ENST00000538026 C11orf63Q6NUN7 778 aa8.45□□□□□ -1.06
SPARC-208ENST00000538026 BRAT1Q6PJG6 821 aa8.45□□□□□ -1.06
SPARC-208ENST00000538026 KYAT3Q6YP21 454 aaKnown RBP8.45□□□□□ -1.06
SPARC-208ENST00000538026 SPOCD1Q6ZMY3 1216 aa8.45□□□□□ -1.06
SPARC-208ENST00000538026 TSPAN33Q86UF1 283 aa8.45□□□□□ -1.06
SPARC-208ENST00000538026 MARCH9Q86YJ5 346 aa8.45□□□□□ -1.06
SPARC-208ENST00000538026 LRRC49Q8IUZ0 686 aa8.45□□□□□ -1.06
SPARC-208ENST00000538026 MAP7D3Q8IWC1 876 aa8.45□□□□□ -1.06
SPARC-208ENST00000538026 KATNAL2Q8IYT4 538 aa8.45□□□□□ -1.06
SPARC-208ENST00000538026 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.45□□□□□ -1.06
SPARC-208ENST00000538026 SETD7Q8WTS6 366 aaKnown RBP8.45□□□□□ -1.06
SPARC-208ENST00000538026 ALG3Q92685 438 aa8.45□□□□□ -1.06
SPARC-208ENST00000538026 TADA1Q96BN2 335 aa8.45□□□□□ -1.06
SPARC-208ENST00000538026 MCCC1Q96RQ3 725 aaPredicted RBP8.45□□□□□ -1.06
SPARC-208ENST00000538026 TMEM121BQ9BXQ6 578 aaPredicted RBP8.45□□□□□ -1.06
SPARC-208ENST00000538026 BRD8Q9H0E9 1235 aa8.45□□□□□ -1.06
SPARC-208ENST00000538026 C10orf88Q9H8K7 445 aa8.45□□□□□ -1.06
SPARC-208ENST00000538026 SCUBE2Q9NQ36 999 aa8.45□□□□□ -1.06
SPARC-208ENST00000538026 IMPACTQ9P2X3 320 aa8.45□□□□□ -1.06
SPARC-208ENST00000538026 B4GALT6Q9UBX8 382 aa8.45□□□□□ -1.06
SPARC-208ENST00000538026 PCDHB9Q9Y5E1 797 aa8.45□□□□□ -1.06
SPARC-208ENST00000538026 HEY1Q9Y5J3 304 aa8.45□□□□□ -1.06
SPARC-208ENST00000538026 RAI2Q9Y5P3 530 aa8.45□□□□□ -1.06
SPARC-208ENST00000538026 U3KQA8 63 aa8.45□□□□□ -1.06
SPARC-208ENST00000538026 COL27A1Q8IZC6 1860 aaPredicted RBP8.45□□□□□ -1.06
SPARC-208ENST00000538026 hCG_1818297A0A087WSY0 165 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 SPTY2D1-AS1A0A0U1RR47 76 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 NPIPB15A6NHN6 443 aaPredicted RBP8.44□□□□□ -1.06
SPARC-208ENST00000538026 NEMP1O14524 444 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 APOL1O14791 398 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 CASC3O15234 703 aaKnown RBP8.44□□□□□ -1.06
SPARC-208ENST00000538026 PSTPIP1O43586 416 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 SPOPO43791 374 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 HYAL3O43820 417 aaPredicted RBP8.44□□□□□ -1.06
SPARC-208ENST00000538026 CST8O60676 142 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 SOCS5O75159 536 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 TM7SF2O76062 418 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 RECQL5O94762 991 aaPredicted RBP8.44□□□□□ -1.06
SPARC-208ENST00000538026 FUCA1P04066 466 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 CAPNS1P04632 268 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 ALPIP09923 528 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 MYF5P13349 255 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 CTPS1P17812 591 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 DGKAP23743 735 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 SERPINA4P29622 427 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 HNF1BP35680 557 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 HSPA9P38646 679 aaKnown RBP8.44□□□□□ -1.06
SPARC-208ENST00000538026 RENBPP51606 427 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 SUOXP51687 545 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 DYNLT1P63172 113 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 IFI35P80217 286 aaPredicted RBP8.44□□□□□ -1.06
SPARC-208ENST00000538026 SKOR1P84550 965 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 SHC2P98077 582 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 WASHC5Q12768 1159 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 DNAJC3Q13217 504 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 ZNF235Q14590 738 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 GRM3Q14832 879 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 PRKD1Q15139 912 aaPredicted RBP8.44□□□□□ -1.06
SPARC-208ENST00000538026 SPA17Q15506 151 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 DPPA4Q7L190 304 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 HSD11B1LQ7Z5J1 315 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 PTAR1Q7Z6K3 402 aaPredicted RBP8.44□□□□□ -1.06
SPARC-208ENST00000538026 TECPR1Q7Z6L1 1165 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 RAB44Q7Z6P3 723 aaPredicted RBP8.44□□□□□ -1.06
SPARC-208ENST00000538026 NT5DC3Q86UY8 548 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 CCDC13Q8IYE1 715 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 CHCHD4Q8N4Q1 142 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 EID2Q8N6I1 236 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 DENND6BQ8NEG7 585 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 RHBDD1Q8TEB9 315 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 EID2BQ96D98 161 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 COQ10AQ96MF6 247 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 TRIB3Q96RU7 358 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 LGR4Q9BXB1 951 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 HEMGNQ9BXL5 484 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 DDX56Q9NY93 547 aaKnown RBP8.44□□□□□ -1.06
SPARC-208ENST00000538026 CHKBQ9Y259 395 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 PCDHA3Q9Y5H8 950 aa8.44□□□□□ -1.06
SPARC-208ENST00000538026 ZFC3H1O60293 1989 aaKnown RBP8.44□□□□□ -1.06
SPARC-208ENST00000538026 SCN8AQ9UQD0 1980 aa8.43□□□□□ -1.06
SPARC-208ENST00000538026 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.43□□□□□ -1.06
SPARC-208ENST00000538026 CFAP69A5D8W1 941 aa8.43□□□□□ -1.06
SPARC-208ENST00000538026 FAM221BA6H8Z2 402 aa8.43□□□□□ -1.06
SPARC-208ENST00000538026 A6NNZ2 444 aa8.43□□□□□ -1.06
SPARC-208ENST00000538026 DDX3YO15523 660 aaKnown RBP8.43□□□□□ -1.06
SPARC-208ENST00000538026 FLRT2O43155 660 aa8.43□□□□□ -1.06
SPARC-208ENST00000538026 DFNA5O60443 496 aa8.43□□□□□ -1.06
SPARC-208ENST00000538026 GCATO75600 419 aa8.43□□□□□ -1.06
SPARC-208ENST00000538026 PIAS2O75928 621 aa8.43□□□□□ -1.06
SPARC-208ENST00000538026 NEBLO76041 1014 aa8.43□□□□□ -1.06
SPARC-208ENST00000538026 HEXIM1O94992 359 aaKnown RBP8.43□□□□□ -1.06
SPARC-208ENST00000538026 ZRANB2O95218 330 aaKnown RBP eCLIP8.43□□□□□ -1.06
SPARC-208ENST00000538026 SOD1P00441 154 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms