RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, human

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLPB-208	ENST00000538021	P4HA2	O15460	535 aa		11.21	□□□□□ -0.61
CLPB-208	ENST00000538021	F9	P00740	461 aa		11.21	□□□□□ -0.61
CLPB-208	ENST00000538021	ETFB	P38117	255 aa		11.21	□□□□□ -0.61
CLPB-208	ENST00000538021	LIG3	P49916	1009 aa		11.21	□□□□□ -0.61
CLPB-208	ENST00000538021	SNX16	P57768	344 aa		11.21	□□□□□ -0.61
CLPB-208	ENST00000538021	RAB15	P59190	212 aa		11.21	□□□□□ -0.61
CLPB-208	ENST00000538021	MTM1	Q13496	603 aa		11.21	□□□□□ -0.61
CLPB-208	ENST00000538021	ACBD5	Q5T8D3	534 aa	Predicted RBP	11.21	□□□□□ -0.61
CLPB-208	ENST00000538021	ZNF354C	Q86Y25	554 aa		11.21	□□□□□ -0.61
CLPB-208	ENST00000538021	FAM114A1	Q8IWE2	563 aa		11.21	□□□□□ -0.61
CLPB-208	ENST00000538021	CCDC13	Q8IYE1	715 aa		11.21	□□□□□ -0.61
CLPB-208	ENST00000538021	NETO2	Q8NC67	525 aa		11.21	□□□□□ -0.61
CLPB-208	ENST00000538021	PLA2G15	Q8NCC3	412 aa		11.21	□□□□□ -0.61
CLPB-208	ENST00000538021	C1orf131	Q8NDD1	294 aa	Known RBP	11.21	□□□□□ -0.61
CLPB-208	ENST00000538021	OR4D9	Q8NGE8	314 aa		11.21	□□□□□ -0.61
CLPB-208	ENST00000538021	CPT1C	Q8TCG5	803 aa		11.21	□□□□□ -0.61
CLPB-208	ENST00000538021	FUBP1	Q96AE4	644 aa	Known RBP	11.21	□□□□□ -0.61
CLPB-208	ENST00000538021	TBCB	Q99426	244 aa		11.21	□□□□□ -0.61
CLPB-208	ENST00000538021	CTRC	Q99895	268 aa		11.21	□□□□□ -0.61
CLPB-208	ENST00000538021	SPATS2L	Q9NUQ6	558 aa	Known RBP	11.21	□□□□□ -0.61
CLPB-208	ENST00000538021	DNAI1	Q9UI46	699 aa		11.21	□□□□□ -0.61
CLPB-208	ENST00000538021	KCTD3	Q9Y597	815 aa		11.21	□□□□□ -0.61
CLPB-208	ENST00000538021	DOCK4	Q8N1I0	1966 aa		11.21	□□□□□ -0.62
CLPB-208	ENST00000538021	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	ANKRD36	A6QL64	1941 aa		11.2	□□□□□ -0.62
CLPB-208	ENST00000538021		B4E171	279 aa		11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	ECEL1	O95672	775 aa		11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	IGSF6	O95976	241 aa		11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	THRA	P10827	490 aa		11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	KEL	P23276	732 aa		11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	TNFRSF8	P28908	595 aa		11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	DCT	P40126	519 aa		11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	TSPAN7	P41732	249 aa		11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	RIPPLY3	P57055	190 aa		11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	KIAA1024L	P59773	190 aa		11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	LRRC63	Q05C16	580 aa		11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	PTPN20	Q4JDL3	420 aa		11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	ARTN	Q5T4W7	220 aa		11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	ZNF658	Q5TYW1	1059 aa	Predicted RBP	11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	TCTN3	Q6NUS6	607 aa		11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	RWDD4	Q6NW29	188 aa	Known RBP	11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	ERAP2	Q6P179	960 aa		11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	TIPARP	Q7Z3E1	657 aa	Known RBP	11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	ZNF438	Q7Z4V0	828 aa		11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	ZNF397	Q8NF99	534 aa	Predicted RBP	11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	RTP4	Q96DX8	246 aa		11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	SPATA32	Q96LK8	384 aa		11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	TEFM	Q96QE5	360 aa	Known RBP	11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	NCAPG	Q9BPX3	1015 aa		11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	TTYH3	Q9C0H2	523 aa		11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	PCDH12	Q9NPG4	1184 aa		11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	CASS4	Q9NQ75	786 aa		11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	NDFIP2	Q9NV92	336 aa		11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	CUEDC1	Q9NWM3	386 aa	Predicted RBP	11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	RMND1	Q9NWS8	449 aa		11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	TMEM9	Q9P0T7	183 aa		11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	DKK3	Q9UBP4	350 aa		11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	MRPS18B	Q9Y676	258 aa	Known RBP	11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	KCNMB2	Q9Y691	235 aa		11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	FBN2	P35556	2912 aa		11.2	□□□□□ -0.62
CLPB-208	ENST00000538021	CXorf51A	A0A1B0GTR3	108 aa		11.19	□□□□□ -0.62
CLPB-208	ENST00000538021		A8MU76	341 aa		11.19	□□□□□ -0.62
CLPB-208	ENST00000538021	INSIG1	O15503	277 aa		11.19	□□□□□ -0.62
CLPB-208	ENST00000538021	BUB1	O43683	1085 aa		11.19	□□□□□ -0.62
CLPB-208	ENST00000538021	TMCC1	O94876	653 aa		11.19	□□□□□ -0.62
CLPB-208	ENST00000538021	ZNF202	O95125	648 aa		11.19	□□□□□ -0.62
CLPB-208	ENST00000538021	PIGN	O95427	931 aa		11.19	□□□□□ -0.62
CLPB-208	ENST00000538021	FGF1	P05230	155 aa		11.19	□□□□□ -0.62
CLPB-208	ENST00000538021	CCNB1	P14635	433 aa		11.19	□□□□□ -0.62
CLPB-208	ENST00000538021	POU3F2	P20265	443 aa	Predicted RBP	11.19	□□□□□ -0.62
CLPB-208	ENST00000538021	CSF2RB	P32927	897 aa		11.19	□□□□□ -0.62
CLPB-208	ENST00000538021	NOP2	P46087	812 aa	Known RBP	11.19	□□□□□ -0.62
CLPB-208	ENST00000538021	GPR3	P46089	330 aa		11.19	□□□□□ -0.62
CLPB-208	ENST00000538021	SUOX	P51687	545 aa		11.19	□□□□□ -0.62
CLPB-208	ENST00000538021	RHOA	P61586	193 aa		11.19	□□□□□ -0.62
CLPB-208	ENST00000538021	ABHD18	Q0P651	414 aa		11.19	□□□□□ -0.62
CLPB-208	ENST00000538021	PNOC	Q13519	176 aa		11.19	□□□□□ -0.62
CLPB-208	ENST00000538021	NR1D2	Q14995	579 aa		11.19	□□□□□ -0.62
CLPB-208	ENST00000538021	SLC25A52	Q3SY17	297 aa		11.19	□□□□□ -0.62
CLPB-208	ENST00000538021	SNAP47	Q5SQN1	464 aa		11.19	□□□□□ -0.62
CLPB-208	ENST00000538021	CFAP58	Q5T655	872 aa		11.19	□□□□□ -0.62
CLPB-208	ENST00000538021	MAMDC2	Q7Z304	686 aa	Predicted RBP	11.19	□□□□□ -0.62
CLPB-208	ENST00000538021	C17orf82	Q86X59	251 aa	Predicted RBP	11.19	□□□□□ -0.62
CLPB-208	ENST00000538021	FAM131B	Q86XD5	332 aa		11.19	□□□□□ -0.62
CLPB-208	ENST00000538021	SRRM1	Q8IYB3	904 aa	Known RBP	11.19	□□□□□ -0.62
CLPB-208	ENST00000538021	PATE1	Q8WXA2	126 aa		11.19	□□□□□ -0.62
CLPB-208	ENST00000538021	PGAP3	Q96FM1	320 aa	Predicted RBP	11.19	□□□□□ -0.62
CLPB-208	ENST00000538021	CCDC34	Q96HJ3	373 aa		11.19	□□□□□ -0.62
CLPB-208	ENST00000538021	EXOC2	Q96KP1	924 aa		11.19	□□□□□ -0.62
CLPB-208	ENST00000538021	GSDMC	Q9BYG8	508 aa		11.19	□□□□□ -0.62
CLPB-208	ENST00000538021	CARS2	Q9HA77	564 aa	Known RBP	11.19	□□□□□ -0.62
CLPB-208	ENST00000538021	TAAR2	Q9P1P5	351 aa		11.19	□□□□□ -0.62
CLPB-208	ENST00000538021	PPARGC1A	Q9UBK2	798 aa	Known RBP	11.19	□□□□□ -0.62
CLPB-208	ENST00000538021	PCDHB3	Q9Y5E6	796 aa		11.19	□□□□□ -0.62
CLPB-208	ENST00000538021	IGHV1OR21-1	A0A087WYE8	117 aa		11.18	□□□□□ -0.62
CLPB-208	ENST00000538021	FAM237A	A0A1B0GTK4	181 aa		11.18	□□□□□ -0.62
CLPB-208	ENST00000538021	FAM170A	A1A519	330 aa		11.18	□□□□□ -0.62
CLPB-208	ENST00000538021	PRSS38	A1L453	326 aa		11.18	□□□□□ -0.62
CLPB-208	ENST00000538021	TNFRSF10C	O14798	259 aa		11.18	□□□□□ -0.62
CLPB-208	ENST00000538021	PPM1D	O15297	605 aa		11.18	□□□□□ -0.62

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