RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 TNS4Q8IZW8 715 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 ASCC1Q8N9N2 400 aaKnown RBP11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 SLC43A3Q8NBI5 491 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 ZNF784Q8NCA9 323 aaPredicted RBP11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 ATL1Q8WXF7 558 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 ZNF516Q92618 1163 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 CDKL2Q92772 493 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 PPP1R16BQ96T49 567 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 IL12RB2Q99665 862 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 SPAG4Q9NPE6 437 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 AGPAT4Q9NRZ5 378 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 VTI1BQ9UEU0 232 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 SYCE1LA8MT33 242 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 KCNU1A8MYU2 1149 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 G3V2L1 256 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 TAF4O00268 1085 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 ABCB7O75027 752 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 C22orf31O95567 290 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 LSM8O95777 96 aaKnown RBP11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 NAT2P11245 290 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 EEF1B2P24534 225 aaKnown RBP11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 TYK2P29597 1187 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 CSE1LP55060 971 aaKnown RBP11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 TSPY1Q01534 308 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 LAMTOR4Q0VGL1 99 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 ILF2Q12905 390 aaKnown RBP11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 STX5Q13190 355 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 SAMD4BQ5PRF9 694 aaKnown RBP11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 TMTC4Q5T4D3 741 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 UBE2UQ5VVX9 321 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 NXNQ6DKJ4 435 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 EFCAB12Q6NXP0 572 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 ZNF534Q76KX8 674 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 LINC00523Q86TU6 105 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 REM2Q8IYK8 340 aaPredicted RBP11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 RNF149Q8NC42 400 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 GABPB2Q8TAK5 448 aaPredicted RBP11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 MARK4Q96L34 752 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 RSAD1Q9HA92 442 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 POLE4Q9NR33 117 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 ZNF358Q9NW07 568 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 TXNDC16Q9P2K2 825 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 FBXO9Q9UK97 447 aaPredicted RBP11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 GPSM3Q9Y4H4 160 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 ISPDA4D126 451 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 SLCO1B7G3V0H7 640 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 K7ERI5 159 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 KCNN4O15554 427 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 IGHA2P01877 340 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 HLA-DRAP01903 254 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 BMP4P12644 408 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 ITIH1P19827 911 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 GSTM2P28161 218 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 CASP3P42574 277 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 ARCN1P48444 511 aaKnown RBP11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 FLT3LGP49771 235 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 PRKCZQ05513 592 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 C19orf57Q0VDD7 668 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 MMRN1Q13201 1228 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 NAB1Q13506 487 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 CBX2Q14781 532 aaPredicted RBP11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 CEP78Q5JTW2 689 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 TBCELQ5QJ74 424 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 STEAP4Q687X5 459 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 LRRC8EQ6NSJ5 796 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 SLC16A12Q6ZSM3 486 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 SCML4Q8N228 414 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 PIK3C3Q8NEB9 887 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 CENPNQ96H22 339 aaPredicted RBP11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 ZBTB45Q96K62 511 aaPredicted RBP11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 FUNDC2Q9BWH2 189 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 RETREG1Q9H6L5 497 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 CREBZFQ9NS37 354 aa11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 SMPD3Q9NY59 655 aaPredicted RBP11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 EIF3LQ9Y262 564 aaKnown RBP11.41□□□□□ -0.58
SEMA4D-221ENST00000537934 ZSCAN5BA6NJL1 495 aa11.4□□□□□ -0.58
SEMA4D-221ENST00000537934 ALDH1A1P00352 501 aa11.4□□□□□ -0.58
SEMA4D-221ENST00000537934 GSNP06396 782 aa11.4□□□□□ -0.58
SEMA4D-221ENST00000537934 HOXD8P13378 290 aaPredicted RBP11.4□□□□□ -0.58
SEMA4D-221ENST00000537934 TFEBP19484 476 aa11.4□□□□□ -0.58
SEMA4D-221ENST00000537934 M6PRP20645 277 aa11.4□□□□□ -0.58
SEMA4D-221ENST00000537934 FASP25445 335 aa11.4□□□□□ -0.58
SEMA4D-221ENST00000537934 FCGRTP55899 365 aa11.4□□□□□ -0.58
SEMA4D-221ENST00000537934 BEX3Q00994 111 aa11.4□□□□□ -0.58
SEMA4D-221ENST00000537934 CARTPTQ16568 116 aa11.4□□□□□ -0.58
SEMA4D-221ENST00000537934 TMEM132AQ24JP5 1023 aa11.4□□□□□ -0.58
SEMA4D-221ENST00000537934 IER5Q5VY09 327 aa11.4□□□□□ -0.58
SEMA4D-221ENST00000537934 TRPV1Q8NER1 839 aa11.4□□□□□ -0.58
SEMA4D-221ENST00000537934 FAM110BQ8TC76 370 aa11.4□□□□□ -0.58
SEMA4D-221ENST00000537934 SLC45A3Q96JT2 553 aa11.4□□□□□ -0.58
SEMA4D-221ENST00000537934 FAM84AQ96KN4 292 aa11.4□□□□□ -0.58
SEMA4D-221ENST00000537934 SNX18Q96RF0 628 aa11.4□□□□□ -0.58
SEMA4D-221ENST00000537934 DHRS9Q9BPW9 319 aa11.4□□□□□ -0.58
SEMA4D-221ENST00000537934 ZBED2Q9BTP6 218 aa11.4□□□□□ -0.58
SEMA4D-221ENST00000537934 TARS2Q9BW92 718 aaKnown RBP11.4□□□□□ -0.58
SEMA4D-221ENST00000537934 GATA5Q9BWX5 397 aaPredicted RBP11.4□□□□□ -0.58
SEMA4D-221ENST00000537934 TMEM181Q9P2C4 612 aa11.4□□□□□ -0.58
SEMA4D-221ENST00000537934 SLC17A6Q9P2U8 582 aa11.4□□□□□ -0.58
SEMA4D-221ENST00000537934 MOSPD1Q9UJG1 213 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms