RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 CCDC167Q9P0B6 97 aa12.22□□□□□ -0.45
CPSF7-218ENST00000537641 ABCD2Q9UBJ2 740 aa12.22□□□□□ -0.45
CPSF7-218ENST00000537641 TIPRLO75663 272 aa12.21□□□□□ -0.45
CPSF7-218ENST00000537641 HNRNPCP07910 306 aaKnown RBP eCLIP12.21□□□□□ -0.45
CPSF7-218ENST00000537641 LTA4HP09960 611 aaKnown RBP12.21□□□□□ -0.45
CPSF7-218ENST00000537641 FCGR1AP12314 374 aa12.21□□□□□ -0.45
CPSF7-218ENST00000537641 HNRNPLP14866 589 aaKnown RBP eCLIP12.21□□□□□ -0.45
CPSF7-218ENST00000537641 KCNE1P15382 129 aa12.21□□□□□ -0.45
CPSF7-218ENST00000537641 ATP6V1B2P21281 511 aa12.21□□□□□ -0.45
CPSF7-218ENST00000537641 CCNCP24863 283 aa12.21□□□□□ -0.45
CPSF7-218ENST00000537641 ARNTP27540 789 aa12.21□□□□□ -0.45
CPSF7-218ENST00000537641 C1QTNF8P60827 252 aa12.21□□□□□ -0.45
CPSF7-218ENST00000537641 ADAM17P78536 824 aa12.21□□□□□ -0.45
CPSF7-218ENST00000537641 MAP2K5Q13163 448 aa12.21□□□□□ -0.45
CPSF7-218ENST00000537641 CTBP1Q13363 440 aa12.21□□□□□ -0.45
CPSF7-218ENST00000537641 ATP6AP1Q15904 470 aa12.21□□□□□ -0.45
CPSF7-218ENST00000537641 MORN1Q5T089 497 aa12.21□□□□□ -0.45
CPSF7-218ENST00000537641 ZNF618Q5T7W0 954 aa12.21□□□□□ -0.45
CPSF7-218ENST00000537641 BTBD8Q5XKL5 378 aa12.21□□□□□ -0.45
CPSF7-218ENST00000537641 ESRP1Q6NXG1 681 aaKnown RBP12.21□□□□□ -0.45
CPSF7-218ENST00000537641 DUS1LQ6P1R4 473 aaKnown RBP12.21□□□□□ -0.45
CPSF7-218ENST00000537641 TTC33Q6PID6 262 aaPredicted RBP12.21□□□□□ -0.45
CPSF7-218ENST00000537641 CYP2R1Q6VVX0 501 aa12.21□□□□□ -0.45
CPSF7-218ENST00000537641 PAQR9Q6ZVX9 377 aa12.21□□□□□ -0.45
CPSF7-218ENST00000537641 TLK2Q86UE8 772 aa12.21□□□□□ -0.45
CPSF7-218ENST00000537641 ZNF354CQ86Y25 554 aa12.21□□□□□ -0.45
CPSF7-218ENST00000537641 C2orf69Q8N8R5 385 aa12.21□□□□□ -0.45
CPSF7-218ENST00000537641 C12orf43Q96C57 262 aaKnown RBP12.21□□□□□ -0.45
CPSF7-218ENST00000537641 HSPBAP1Q96EW2 488 aa12.21□□□□□ -0.45
CPSF7-218ENST00000537641 VPS50Q96JG6 964 aa12.21□□□□□ -0.45
CPSF7-218ENST00000537641 FEM1CQ96JP0 617 aa12.21□□□□□ -0.45
CPSF7-218ENST00000537641 MED10Q9BTT4 135 aa12.21□□□□□ -0.45
CPSF7-218ENST00000537641 ADI1Q9BV57 179 aa12.21□□□□□ -0.45
CPSF7-218ENST00000537641 YTHDF1Q9BYJ9 559 aaKnown RBP12.21□□□□□ -0.45
CPSF7-218ENST00000537641 GLOD4Q9HC38 313 aa12.21□□□□□ -0.45
CPSF7-218ENST00000537641 ENTPD7Q9NQZ7 604 aa12.21□□□□□ -0.45
CPSF7-218ENST00000537641 TREX1Q9NSU2 369 aa12.21□□□□□ -0.45
CPSF7-218ENST00000537641 TBC1D23Q9NUY8 699 aa12.21□□□□□ -0.45
CPSF7-218ENST00000537641 ARHGEF38Q9NXL2 777 aa12.21□□□□□ -0.45
CPSF7-218ENST00000537641 UBP1Q9NZI7 540 aa12.21□□□□□ -0.45
CPSF7-218ENST00000537641 NDUFAF1Q9Y375 327 aa12.21□□□□□ -0.45
CPSF7-218ENST00000537641 I6L893 689 aaPredicted RBP12.2□□□□□ -0.46
CPSF7-218ENST00000537641 HAS3O00219 553 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 NRP1O14786 923 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 BEST1O76090 585 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 HSD17B1P14061 328 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 CKMT2P17540 419 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 NELFEP18615 380 aaKnown RBP12.2□□□□□ -0.46
CPSF7-218ENST00000537641 IL10P22301 178 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 CYP2C18P33260 490 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 CD97P48960 835 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 PSEN2P49810 448 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 NDUFV1P49821 464 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 PGGT1BP53609 377 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 CDH15P55291 814 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 PLOD1Q02809 727 aaPredicted RBP12.2□□□□□ -0.46
CPSF7-218ENST00000537641 FOXM1Q08050 763 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 MERTKQ12866 999 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 ILF2Q12905 390 aaKnown RBP12.2□□□□□ -0.46
CPSF7-218ENST00000537641 SPIDRQ14159 915 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 SNX17Q15036 470 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 SLC14A2Q15849 920 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 SLC36A3Q495N2 470 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 TBCELQ5QJ74 424 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 PM20D1Q6GTS8 502 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 DENND5AQ6IQ26 1287 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 DCLRE1AQ6PJP8 1040 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 SPRED1Q7Z699 444 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 GALNT7Q86SF2 657 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 GRIN3AQ8TCU5 1115 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 CALML6Q8TD86 181 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 CANT1Q8WVQ1 401 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 SEPT8Q92599 483 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 BORCS5Q969J3 196 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 SGF29Q96ES7 293 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 CNDP2Q96KP4 475 aaKnown RBP12.2□□□□□ -0.46
CPSF7-218ENST00000537641 IL12RB2Q99665 862 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 FICDQ9BVA6 458 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 GSTO2Q9H4Y5 243 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 LIN28AQ9H9Z2 209 aaKnown RBP12.2□□□□□ -0.46
CPSF7-218ENST00000537641 DDIT4Q9NX09 232 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 TMEM9Q9P0T7 183 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 FBXO5Q9UKT4 447 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 PIN4Q9Y237 131 aaKnown RBP12.2□□□□□ -0.46
CPSF7-218ENST00000537641 SH3GLB1Q9Y371 365 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 FIS1Q9Y3D6 152 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 SMIM28A0A1B0GU29 152 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 DHRS12A0PJE2 317 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 CCDC78A2IDD5 438 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 CLDN5O00501 218 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 DLGAP1O14490 977 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 HDCP19113 662 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 FASP25445 335 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 PSMA4P25789 261 aaKnown RBP12.2□□□□□ -0.46
CPSF7-218ENST00000537641 DCKP27707 260 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 ADRA1AP35348 466 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 GRIA3P42263 894 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 CXCR3P49682 368 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 ENTPD1P49961 510 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 CPT1AP50416 773 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms