RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 RFTN1Q14699 578 aaPredicted RBP9.74□□□□□ -0.85
CHD4-207ENST00000537634 ANO6Q4KMQ2 910 aa9.74□□□□□ -0.85
CHD4-207ENST00000537634 FILIP1LQ4L180 1135 aa9.74□□□□□ -0.85
CHD4-207ENST00000537634 AFMIDQ63HM1 303 aa9.74□□□□□ -0.85
CHD4-207ENST00000537634 ZSWIM9Q86XI8 627 aa9.74□□□□□ -0.85
CHD4-207ENST00000537634 PSTKQ8IV42 348 aaKnown RBP9.74□□□□□ -0.85
CHD4-207ENST00000537634 ARHGAP12Q8IWW6 846 aa9.74□□□□□ -0.85
CHD4-207ENST00000537634 ARL14Q8N4G2 192 aa9.74□□□□□ -0.85
CHD4-207ENST00000537634 ARFGAP1Q8N6T3 406 aa9.74□□□□□ -0.85
CHD4-207ENST00000537634 NPWQ8N729 165 aa9.74□□□□□ -0.85
CHD4-207ENST00000537634 WDR36Q8NI36 951 aaKnown RBP9.74□□□□□ -0.85
CHD4-207ENST00000537634 FNIP1Q8TF40 1166 aa9.74□□□□□ -0.85
CHD4-207ENST00000537634 CCDC74AQ96AQ1 378 aa9.74□□□□□ -0.85
CHD4-207ENST00000537634 ZNF653Q96CK0 615 aa9.74□□□□□ -0.85
CHD4-207ENST00000537634 TRIM11Q96F44 468 aa9.74□□□□□ -0.85
CHD4-207ENST00000537634 CCDC97Q96F63 343 aaPredicted RBP9.74□□□□□ -0.85
CHD4-207ENST00000537634 PDXPQ96GD0 296 aa9.74□□□□□ -0.85
CHD4-207ENST00000537634 SLC46A1Q96NT5 459 aa9.74□□□□□ -0.85
CHD4-207ENST00000537634 TRIM7Q9C029 511 aa9.74□□□□□ -0.85
CHD4-207ENST00000537634 HAUS4Q9H6D7 363 aa9.74□□□□□ -0.85
CHD4-207ENST00000537634 ZWILCHQ9H900 591 aa9.74□□□□□ -0.85
CHD4-207ENST00000537634 CPNE5Q9HCH3 593 aa9.74□□□□□ -0.85
CHD4-207ENST00000537634 RTN4Q9NQC3 1192 aaKnown RBP9.74□□□□□ -0.85
CHD4-207ENST00000537634 CNOT8Q9UFF9 292 aaKnown RBP9.74□□□□□ -0.85
CHD4-207ENST00000537634 SEPT3Q9UH03 358 aa9.74□□□□□ -0.85
CHD4-207ENST00000537634 SCINQ9Y6U3 715 aa9.74□□□□□ -0.85
CHD4-207ENST00000537634 KIF26BQ2KJY2 2108 aa9.74□□□□□ -0.85
CHD4-207ENST00000537634 A0A1W2PNU3 283 aaPredicted RBP9.73□□□□□ -0.85
CHD4-207ENST00000537634 SMTNL1A8MU46 457 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 D6RAR5 112 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 H3BRJ5 948 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 ERVH48-1M5A8F1 160 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 NTN3O00634 580 aaPredicted RBP9.73□□□□□ -0.85
CHD4-207ENST00000537634 LRCH4O75427 683 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 RECQL5O94762 991 aaPredicted RBP9.73□□□□□ -0.85
CHD4-207ENST00000537634 TNFSF15O95150 251 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 TNFP01375 233 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 GZMAP12544 262 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 KELP23276 732 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 ARL4AP40617 200 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 HCAR3P49019 387 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 SCNN1BP51168 640 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 RENBPP51606 427 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 PDX1P52945 283 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 KIAA1024LP59773 190 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 RHDQ02161 417 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 NSUN2Q08J23 767 aaKnown RBP eCLIP9.73□□□□□ -0.85
CHD4-207ENST00000537634 KLHL30Q0D2K2 578 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 RALGDSQ12967 914 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 ZNF235Q14590 738 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 LBRQ14739 615 aaKnown RBP9.73□□□□□ -0.85
CHD4-207ENST00000537634 TAF1BQ53T94 588 aaPredicted RBP9.73□□□□□ -0.85
CHD4-207ENST00000537634 ARHGAP40Q5TG30 622 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 TMCO4Q5TGY1 634 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 LIPIQ6XZB0 460 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 ARHGAP36Q6ZRI8 547 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 CYP4V2Q6ZWL3 525 aaPredicted RBP9.73□□□□□ -0.85
CHD4-207ENST00000537634 DPPA4Q7L190 304 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 ZNF571Q7Z3V5 609 aaPredicted RBP9.73□□□□□ -0.85
CHD4-207ENST00000537634 TAF8Q7Z7C8 310 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 LZTR1Q8N653 840 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 PLA2G15Q8NCC3 412 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 OR6C4Q8NGE1 309 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 OR56A4Q8NGH8 313 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 ECHDC3Q96DC8 303 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 LIN37Q96GY3 246 aaPredicted RBP9.73□□□□□ -0.85
CHD4-207ENST00000537634 GFM1Q96RP9 751 aaKnown RBP9.73□□□□□ -0.85
CHD4-207ENST00000537634 RBM15Q96T37 977 aaKnown RBP eCLIP9.73□□□□□ -0.85
CHD4-207ENST00000537634 BPIFA3Q9BQP9 254 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 STRADBQ9C0K7 418 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 EPB41L5Q9HCM4 733 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 MRPL47Q9HD33 250 aaKnown RBP9.73□□□□□ -0.85
CHD4-207ENST00000537634 AIPL1Q9NZN9 384 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 MYO1AQ9UBC5 1043 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 DGKBQ9Y6T7 804 aa9.73□□□□□ -0.85
CHD4-207ENST00000537634 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.72□□□□□ -0.85
CHD4-207ENST00000537634 A0A1W2PQC6 194 aa9.72□□□□□ -0.85
CHD4-207ENST00000537634 PMS2P1A4D2B8 440 aa9.72□□□□□ -0.85
CHD4-207ENST00000537634 A8MX80 341 aa9.72□□□□□ -0.85
CHD4-207ENST00000537634 CDRT15L2A8MXV6 281 aa9.72□□□□□ -0.85
CHD4-207ENST00000537634 TMX2-CTNND1H3BSU7 103 aa9.72□□□□□ -0.85
CHD4-207ENST00000537634 DDX3XO00571 662 aaKnown RBP eCLIP9.72□□□□□ -0.85
CHD4-207ENST00000537634 CASC3O15234 703 aaKnown RBP9.72□□□□□ -0.85
CHD4-207ENST00000537634 C1QL1O75973 258 aa9.72□□□□□ -0.85
CHD4-207ENST00000537634 RPLP0P05388 317 aaKnown RBP9.72□□□□□ -0.85
CHD4-207ENST00000537634 ITGA2BP08514 1039 aa9.72□□□□□ -0.85
CHD4-207ENST00000537634 MYBL1P10243 752 aa9.72□□□□□ -0.85
CHD4-207ENST00000537634 NFKBIAP25963 317 aa9.72□□□□□ -0.85
CHD4-207ENST00000537634 PCK1P35558 622 aa9.72□□□□□ -0.85
CHD4-207ENST00000537634 HSPA9P38646 679 aaKnown RBP9.72□□□□□ -0.85
CHD4-207ENST00000537634 PRKCIP41743 596 aa9.72□□□□□ -0.85
CHD4-207ENST00000537634 VAC14Q08AM6 782 aa9.72□□□□□ -0.85
CHD4-207ENST00000537634 EIF3IQ13347 325 aaKnown RBP9.72□□□□□ -0.85
CHD4-207ENST00000537634 DPYSQ14117 519 aa9.72□□□□□ -0.85
CHD4-207ENST00000537634 ACOX1Q15067 660 aa9.72□□□□□ -0.85
CHD4-207ENST00000537634 E4F1Q66K89 784 aaPredicted RBP9.72□□□□□ -0.85
CHD4-207ENST00000537634 KCTD16Q68DU8 428 aa9.72□□□□□ -0.85
CHD4-207ENST00000537634 TMCO3Q6UWJ1 677 aa9.72□□□□□ -0.85
CHD4-207ENST00000537634 NYAP1Q6ZVC0 841 aa9.72□□□□□ -0.85
CHD4-207ENST00000537634 CLEC14AQ86T13 490 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms