RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 ARL5AQ9Y689 179 aa15.73■□□□□ 0.11
MKS1-204ENST00000537529 OR51F1A6NGY5 319 aa15.72■□□□□ 0.11
MKS1-204ENST00000537529 GRID2O43424 1007 aa15.72■□□□□ 0.11
MKS1-204ENST00000537529 KRT36O76013 467 aa15.72■□□□□ 0.11
MKS1-204ENST00000537529 GOT2P00505 430 aaKnown RBP15.72■□□□□ 0.11
MKS1-204ENST00000537529 KLKB1P03952 638 aa15.72■□□□□ 0.11
MKS1-204ENST00000537529 OGNP20774 298 aaKnown RBP15.72■□□□□ 0.11
MKS1-204ENST00000537529 KLF10Q13118 480 aa15.72■□□□□ 0.11
MKS1-204ENST00000537529 ACAP2Q15057 778 aa15.72■□□□□ 0.11
MKS1-204ENST00000537529 TRIM67Q6ZTA4 783 aa15.72■□□□□ 0.11
MKS1-204ENST00000537529 RNF135Q8IUD6 432 aa15.72■□□□□ 0.11
MKS1-204ENST00000537529 PHTF2Q8N3S3 785 aa15.72■□□□□ 0.11
MKS1-204ENST00000537529 OR52K2Q8NGK3 314 aa15.72■□□□□ 0.11
MKS1-204ENST00000537529 MOCOSQ96EN8 888 aa15.72■□□□□ 0.11
MKS1-204ENST00000537529 CNDP1Q96KN2 507 aa15.72■□□□□ 0.11
MKS1-204ENST00000537529 SAGE1Q9NXZ1 904 aa15.72■□□□□ 0.11
MKS1-204ENST00000537529 ZDHHC2Q9UIJ5 367 aa15.72■□□□□ 0.11
MKS1-204ENST00000537529 TET1Q8NFU7 2136 aa15.72■□□□□ 0.11
MKS1-204ENST00000537529 CENPFP49454 3210 aa15.72■□□□□ 0.11
MKS1-204ENST00000537529 NEMP1O14524 444 aa15.72■□□□□ 0.11
MKS1-204ENST00000537529 SLC22A2O15244 555 aa15.72■□□□□ 0.11
MKS1-204ENST00000537529 CD3EAPO15446 510 aaKnown RBP15.72■□□□□ 0.11
MKS1-204ENST00000537529 ZBTB14O43829 449 aa15.72■□□□□ 0.11
MKS1-204ENST00000537529 CRTAMO95727 393 aa15.72■□□□□ 0.11
MKS1-204ENST00000537529 IRF1P10914 325 aa15.72■□□□□ 0.11
MKS1-204ENST00000537529 COX4I1P13073 169 aa15.72■□□□□ 0.11
MKS1-204ENST00000537529 CES1P23141 567 aa15.72■□□□□ 0.11
MKS1-204ENST00000537529 PPP3CCP48454 512 aa15.72■□□□□ 0.11
MKS1-204ENST00000537529 DSG1Q02413 1049 aa15.72■□□□□ 0.11
MKS1-204ENST00000537529 NSUN2Q08J23 767 aaKnown RBP eCLIP15.72■□□□□ 0.11
MKS1-204ENST00000537529 ADGRF1Q5T601 910 aa15.72■□□□□ 0.11
MKS1-204ENST00000537529 SLC39A5Q6ZMH5 540 aa15.72■□□□□ 0.11
MKS1-204ENST00000537529 SDCCAG8Q86SQ7 713 aaPredicted RBP15.72■□□□□ 0.11
MKS1-204ENST00000537529 LDB1Q86U70 411 aaPredicted RBP15.72■□□□□ 0.11
MKS1-204ENST00000537529 SLC22A9Q8IVM8 553 aa15.72■□□□□ 0.11
MKS1-204ENST00000537529 UBXN10Q96LJ8 280 aa15.72■□□□□ 0.11
MKS1-204ENST00000537529 ZNF558Q96NG5 402 aa15.72■□□□□ 0.11
MKS1-204ENST00000537529 HERC2P3Q9BVR0 1158 aa15.72■□□□□ 0.11
MKS1-204ENST00000537529 KLF16Q9BXK1 252 aaPredicted RBP15.72■□□□□ 0.11
MKS1-204ENST00000537529 SCUBE2Q9NQ36 999 aa15.72■□□□□ 0.11
MKS1-204ENST00000537529 CATSPERZQ9NTU4 200 aa15.72■□□□□ 0.11
MKS1-204ENST00000537529 ARIH1Q9Y4X5 557 aaPredicted RBP15.72■□□□□ 0.11
MKS1-204ENST00000537529 GOLGA8QA0A0J9YX86 632 aa15.71■□□□□ 0.11
MKS1-204ENST00000537529 CCDC162PA2VCL2 907 aa15.71■□□□□ 0.11
MKS1-204ENST00000537529 GOLGA8OA6NCC3 632 aa15.71■□□□□ 0.11
MKS1-204ENST00000537529 GOLGA8NF8WBI6 632 aa15.71■□□□□ 0.11
MKS1-204ENST00000537529 INSIG1O15503 277 aa15.71■□□□□ 0.11
MKS1-204ENST00000537529 WISP3O95389 354 aaPredicted RBP15.71■□□□□ 0.11
MKS1-204ENST00000537529 CDKN2DP55273 166 aa15.71■□□□□ 0.11
MKS1-204ENST00000537529 ZRSR2Q15696 482 aaKnown RBP15.71■□□□□ 0.11
MKS1-204ENST00000537529 TLDC1Q6P9B6 456 aa15.71■□□□□ 0.11
MKS1-204ENST00000537529 HERC6Q8IVU3 1022 aa15.71■□□□□ 0.11
MKS1-204ENST00000537529 AFAP1L2Q8N4X5 818 aa15.71■□□□□ 0.11
MKS1-204ENST00000537529 GIMAP7Q8NHV1 300 aa15.71■□□□□ 0.11
MKS1-204ENST00000537529 TMEM169Q96HH4 297 aa15.71■□□□□ 0.11
MKS1-204ENST00000537529 CLPTM1LQ96KA5 538 aa15.71■□□□□ 0.11
MKS1-204ENST00000537529 NUF2Q9BZD4 464 aa15.71■□□□□ 0.11
MKS1-204ENST00000537529 RNF208Q9H0X6 261 aa15.71■□□□□ 0.11
MKS1-204ENST00000537529 WDR55Q9H6Y2 383 aaPredicted RBP15.71■□□□□ 0.11
MKS1-204ENST00000537529 SUDS3Q9H7L9 328 aaPredicted RBP15.71■□□□□ 0.11
MKS1-204ENST00000537529 EML4Q9HC35 981 aaKnown RBP15.71■□□□□ 0.11
MKS1-204ENST00000537529 GKN1Q9NS71 199 aa15.71■□□□□ 0.11
MKS1-204ENST00000537529 SLC7A8Q9UHI5 535 aa15.71■□□□□ 0.11
MKS1-204ENST00000537529 AGO1Q9UL18 857 aaKnown RBP15.71■□□□□ 0.11
MKS1-204ENST00000537529 ACTL7AQ9Y615 435 aa15.71■□□□□ 0.11
MKS1-204ENST00000537529 TRPC5OSA6NMA1 111 aa15.71■□□□□ 0.1
MKS1-204ENST00000537529 A8MT66 165 aa15.71■□□□□ 0.1
MKS1-204ENST00000537529 IPO13O94829 963 aaKnown RBP15.71■□□□□ 0.1
MKS1-204ENST00000537529 CCL5P13501 91 aa15.71■□□□□ 0.1
MKS1-204ENST00000537529 FDXRP22570 491 aa15.71■□□□□ 0.1
MKS1-204ENST00000537529 PTDSS1P48651 473 aaKnown RBP15.71■□□□□ 0.1
MKS1-204ENST00000537529 SGSHP51688 502 aa15.71■□□□□ 0.1
MKS1-204ENST00000537529 SLC25A3Q00325 362 aa15.71■□□□□ 0.1
MKS1-204ENST00000537529 TLE2Q04725 743 aa15.71■□□□□ 0.1
MKS1-204ENST00000537529 CUL3Q13618 768 aa15.71■□□□□ 0.1
MKS1-204ENST00000537529 LSM12Q3MHD2 195 aaKnown RBP15.71■□□□□ 0.1
MKS1-204ENST00000537529 TRIM60Q495X7 471 aa15.71■□□□□ 0.1
MKS1-204ENST00000537529 RIPOR1Q6ZS17 1223 aa15.71■□□□□ 0.1
MKS1-204ENST00000537529 OR13C4Q8NGS5 318 aa15.71■□□□□ 0.1
MKS1-204ENST00000537529 OR4L1Q8NH43 312 aa15.71■□□□□ 0.1
MKS1-204ENST00000537529 FAR2Q96K12 515 aa15.71■□□□□ 0.1
MKS1-204ENST00000537529 TOX2Q96NM4 488 aa15.71■□□□□ 0.1
MKS1-204ENST00000537529 SHCBP1LQ9BZQ2 653 aa15.71■□□□□ 0.1
MKS1-204ENST00000537529 MUC3BQ9H195 1237 aa15.71■□□□□ 0.1
MKS1-204ENST00000537529 NLE1Q9NVX2 485 aaPredicted RBP15.71■□□□□ 0.1
MKS1-204ENST00000537529 ARHGAP26Q9UNA1 814 aa15.71■□□□□ 0.1
MKS1-204ENST00000537529 TBC1D30Q9Y2I9 924 aa15.71■□□□□ 0.1
MKS1-204ENST00000537529 HTTP42858 3142 aa15.7■□□□□ 0.1
MKS1-204ENST00000537529 A0A088AWK7 358 aa15.7■□□□□ 0.1
MKS1-204ENST00000537529 PRRG1O14668 218 aa15.7■□□□□ 0.1
MKS1-204ENST00000537529 BUD23O43709 281 aaKnown RBP15.7■□□□□ 0.1
MKS1-204ENST00000537529 TSPAN3O60637 253 aa15.7■□□□□ 0.1
MKS1-204ENST00000537529 PIRTP0C851 137 aa15.7■□□□□ 0.1
MKS1-204ENST00000537529 EPHA3P29320 983 aa15.7■□□□□ 0.1
MKS1-204ENST00000537529 GCKP35557 465 aa15.7■□□□□ 0.1
MKS1-204ENST00000537529 RGRP47804 291 aa15.7■□□□□ 0.1
MKS1-204ENST00000537529 SCNN1BP51168 640 aa15.7■□□□□ 0.1
MKS1-204ENST00000537529 SH2D4BQ5SQS7 431 aa15.7■□□□□ 0.1
MKS1-204ENST00000537529 C1orf146Q5VVC0 180 aa15.7■□□□□ 0.1
MKS1-204ENST00000537529 RNF219Q5W0B1 726 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms