RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 STXBP5Q5T5C0 1151 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 CCNJQ5T5M9 372 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 N4BP2L1Q5TBK1 243 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 PLD3Q8IV08 490 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 BCL7BQ9BQE9 202 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 MXRA8Q9BRK3 442 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 RNPEPQ9H4A4 650 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 DCDC2Q9UHG0 476 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 BMP4P12644 408 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 IL12RB1P42701 662 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 PTPN9P43378 593 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 SLC36A3Q495N2 470 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 CLVS2Q5SYC1 327 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 ERMP1Q7Z2K6 904 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 ZNF467Q7Z7K2 595 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 DHFR2Q86XF0 187 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 LURAP1LQ8IV03 231 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 MCOLN2Q8IZK6 566 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 OFCC1Q8IZS5 231 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 CNTD1Q8N815 330 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 NAT8LQ8N9F0 302 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 APPL2Q8NEU8 664 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 CHAC2Q8WUX2 184 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 KCTD14Q9BQ13 255 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 SH2D3AQ9BRG2 576 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 PNPLA8Q9NP80 782 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 FBXO8Q9NRD0 319 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 IPPQ9Y573 584 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 TRIM64A6NGJ6 449 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 ENPP3O14638 875 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 ACOT8O14734 319 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 ZBTB14O43829 449 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 SYNCRIPO60506 623 aaKnown RBP10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 TADA2AO75478 443 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 DNAJB5O75953 348 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 FCGR1AP12314 374 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 GLDCP23378 1020 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 ETV1P50549 477 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 OLR1P78380 273 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 CACNB2Q08289 660 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 TARDBPQ13148 414 aaKnown RBP eCLIP10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 FAXCQ5TGI0 409 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 METTL2BQ6P1Q9 378 aaKnown RBP10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 SPOCD1Q6ZMY3 1216 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 CDH24Q86UP0 819 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 SLC9A9Q8IVB4 645 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 CCDC185Q8N715 623 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 MCPH1Q8NEM0 835 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 OR6Q1Q8NGQ2 317 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 TP53INP1Q96A56 240 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 VCPIP1Q96JH7 1222 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 PPP1R16BQ96T49 567 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 TM9SF2Q99805 663 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 LHPPQ9H008 270 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 PXMP2Q9NR77 195 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 SMPD3Q9NY59 655 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 IP6K2Q9UHH9 426 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 COL11A2P13942 1736 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 A8MX80 341 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 KPNA7A9QM74 516 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 FAM155BO75949 473 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 SLITRK3O94933 977 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 NDST3O95803 873 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 CTSHP09668 335 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 ATF6P18850 670 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 THPOP40225 353 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 SRP54P61011 504 aaKnown RBP10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 GNA13Q14344 377 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 CYP2R1Q6VVX0 501 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 CATSPER4Q7RTX7 472 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 LPGAT1Q92604 370 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 SLITRK1Q96PX8 696 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 IL12RB2Q99665 862 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 DGCR6LQ9BY27 220 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 STOML2Q9UJZ1 356 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 NEMP1O14524 444 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 PRKD3O94806 890 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 GCLMP48507 274 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 VAMP7P51809 220 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 IFITM3Q01628 133 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 ACAP2Q15057 778 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 ESCO2Q56NI9 601 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 DESI1Q6ICB0 168 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 EPGNQ6UW88 154 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 UNC45BQ8IWX7 931 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 FBXL20Q96IG2 436 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 NT5C1BQ96P26 610 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 GAS2L1Q99501 681 aaPredicted RBP10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 C17orf62Q9BQA9 187 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 MRPL39Q9NYK5 338 aaKnown RBP10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 MOCS1Q9NZB8 636 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 TNFRSF10DQ9UBN6 386 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 K7ERI5 159 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 HBP1O60381 514 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 RFPL1O75677 317 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 CCNE2O96020 404 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 PSMA4P25789 261 aaKnown RBP10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 TAS2R40P59535 323 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 BEX3Q00994 111 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 STX5Q13190 355 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms