RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 PEX5LQ8IYB4 626 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 HDAC7Q8WUI4 952 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 SENP8Q96LD8 212 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 MBOAT7Q96N66 472 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 ATP13A3Q9H7F0 1226 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 MCUBQ9NWR8 336 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 LAMB2P55268 1798 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 SIGLEC16A6NMB1 481 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 F8VP50 259 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 FARP2O94887 1054 aaPredicted RBP10.68□□□□□ -0.7
CLIP1-209ENST00000537178 PGK1P00558 417 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 AKR1A1P14550 325 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 SOX10P56693 466 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 RGS1Q08116 209 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 SEC23AQ15436 765 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 PTPRNQ16849 979 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 ANXA8L1Q5VT79 327 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 C16orf59Q7L2K0 433 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 CACUL1Q86Y37 369 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 RGL4Q8IZJ4 473 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 DGCR14Q96DF8 476 aaKnown RBP10.68□□□□□ -0.7
CLIP1-209ENST00000537178 ACE2Q9BYF1 805 aaPredicted RBP10.68□□□□□ -0.7
CLIP1-209ENST00000537178 ZFP14Q9HCL3 533 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 MORF4L1Q9UBU8 362 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 MRPS33Q9Y291 106 aaKnown RBP10.68□□□□□ -0.7
CLIP1-209ENST00000537178 NUP98P52948 1817 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 FAM237BA0A1B0GVD1 139 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 DHRS12A0PJE2 317 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 PLOD3O60568 738 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 ALOX5P09917 674 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 CHKAP35790 457 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 GRIA4P48058 902 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 USP41Q3LFD5 358 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 MEIOBQ8N635 442 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 CLIP3Q96DZ5 547 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 PANX1Q96RD7 426 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 TBC1D10AQ9BXI6 508 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 TRPV2Q9Y5S1 764 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 A8MX80 341 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 MCIDASD6RGH6 385 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 FFAR3O14843 346 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 MAGEB3O15480 346 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 GPR42O15529 346 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 PRODHO43272 600 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 TCEA3O75764 348 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 PSEN1P49768 467 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 OAZ1P54368 228 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 PFKPQ01813 784 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 GRB14Q14449 540 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 MFSD10Q14728 455 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 OAFQ86UD1 273 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 DAW1Q8N136 415 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 DPF3Q92784 378 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 RERGQ96A58 199 aaPredicted RBP10.68□□□□□ -0.7
CLIP1-209ENST00000537178 MNTQ99583 582 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 SUCOQ9UBS9 1254 aaKnown RBP10.68□□□□□ -0.7
CLIP1-209ENST00000537178 CPA4Q9UI42 421 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 PRPF19Q9UMS4 504 aaKnown RBP10.68□□□□□ -0.7
CLIP1-209ENST00000537178 FAM205AQ6ZU69 1335 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 IQCMA0A1B0GVH7 501 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 MOXD2PA6NHM9 499 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 CXCL11O14625 94 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 CD86P42081 329 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 ABCG1P45844 678 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 SPIBQ01892 262 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 RBBP4Q09028 425 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 BST1Q10588 318 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 HECTD3Q5T447 861 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 FAM43BQ6ZT52 329 aaPredicted RBP10.68□□□□□ -0.7
CLIP1-209ENST00000537178 CCDC80Q76M96 950 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 RASAL3Q86YV0 1011 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 HPS6Q86YV9 775 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 SLC41A1Q8IVJ1 513 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 CDYL2Q8N8U2 506 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 ITCHQ96J02 903 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 TTLL2Q9BWV7 592 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 KIAA1683Q9H0B3 1180 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 PCDH12Q9NPG4 1184 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 FBXO6Q9NRD1 293 aaPredicted RBP10.68□□□□□ -0.7
CLIP1-209ENST00000537178 RASSF1Q9NS23 344 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 PSMD13Q9UNM6 376 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 PCDHA11Q9Y5I1 949 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 ATAD5Q96QE3 1844 aa10.68□□□□□ -0.7
CLIP1-209ENST00000537178 ARHGEF33A8MVX0 844 aa10.67□□□□□ -0.7
CLIP1-209ENST00000537178 SCN2BO60939 215 aa10.67□□□□□ -0.7
CLIP1-209ENST00000537178 ERAL1O75616 437 aaKnown RBP10.67□□□□□ -0.7
CLIP1-209ENST00000537178 SCGNO76038 276 aa10.67□□□□□ -0.7
CLIP1-209ENST00000537178 LRIG2O94898 1065 aa10.67□□□□□ -0.7
CLIP1-209ENST00000537178 SLITRK3O94933 977 aa10.67□□□□□ -0.7
CLIP1-209ENST00000537178 PGM3O95394 542 aa10.67□□□□□ -0.7
CLIP1-209ENST00000537178 ATP4AP20648 1035 aa10.67□□□□□ -0.7
CLIP1-209ENST00000537178 CDC25CP30307 473 aa10.67□□□□□ -0.7
CLIP1-209ENST00000537178 PTDSS1P48651 473 aaKnown RBP10.67□□□□□ -0.7
CLIP1-209ENST00000537178 MYBPC3Q14896 1274 aa10.67□□□□□ -0.7
CLIP1-209ENST00000537178 SLC15A2Q16348 729 aa10.67□□□□□ -0.7
CLIP1-209ENST00000537178 PDK4Q16654 411 aa10.67□□□□□ -0.7
CLIP1-209ENST00000537178 WDR12Q9GZL7 423 aaKnown RBP10.67□□□□□ -0.7
CLIP1-209ENST00000537178 CLK4Q9HAZ1 481 aaKnown RBP10.67□□□□□ -0.7
CLIP1-209ENST00000537178 INTS7Q9NVH2 962 aaKnown RBP10.67□□□□□ -0.7
CLIP1-209ENST00000537178 FBXL21Q9UKT6 434 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms