RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 TCEA2Q15560 299 aa19.8■□□□□ 0.76
TNFRSF1B-204ENST00000536782 PAF1Q8N7H5 531 aa19.8■□□□□ 0.76
TNFRSF1B-204ENST00000536782 SNRNP25Q9BV90 132 aaKnown RBP19.8■□□□□ 0.76
TNFRSF1B-204ENST00000536782 CINPQ9BW66 212 aaPredicted RBP19.8■□□□□ 0.76
TNFRSF1B-204ENST00000536782 SP110Q9HB58 689 aa19.8■□□□□ 0.76
TNFRSF1B-204ENST00000536782 AHCTF1Q8WYP5 2266 aa19.79■□□□□ 0.76
TNFRSF1B-204ENST00000536782 CDRT15L2A8MXV6 281 aa19.79■□□□□ 0.76
TNFRSF1B-204ENST00000536782 DFFAO00273 331 aa19.79■□□□□ 0.76
TNFRSF1B-204ENST00000536782 PRPSAP2O60256 369 aa19.79■□□□□ 0.76
TNFRSF1B-204ENST00000536782 TNFP01375 233 aa19.79■□□□□ 0.76
TNFRSF1B-204ENST00000536782 ERCC2P18074 760 aa19.79■□□□□ 0.76
TNFRSF1B-204ENST00000536782 POLR2LP62875 67 aaKnown RBP19.79■□□□□ 0.76
TNFRSF1B-204ENST00000536782 SKOR1P84550 965 aa19.79■□□□□ 0.76
TNFRSF1B-204ENST00000536782 BCL2L1Q07817 233 aa19.79■□□□□ 0.76
TNFRSF1B-204ENST00000536782 NSUN2Q08J23 767 aaKnown RBP eCLIP19.79■□□□□ 0.76
TNFRSF1B-204ENST00000536782 RFTN1Q14699 578 aaPredicted RBP19.79■□□□□ 0.76
TNFRSF1B-204ENST00000536782 TAF1BQ53T94 588 aaPredicted RBP19.79■□□□□ 0.76
TNFRSF1B-204ENST00000536782 AFMIDQ63HM1 303 aa19.79■□□□□ 0.76
TNFRSF1B-204ENST00000536782 AOPEPQ8N6M6 819 aa19.79■□□□□ 0.76
TNFRSF1B-204ENST00000536782 ARFGAP1Q8N6T3 406 aa19.79■□□□□ 0.76
TNFRSF1B-204ENST00000536782 OR6C4Q8NGE1 309 aa19.79■□□□□ 0.76
TNFRSF1B-204ENST00000536782 CCDC74AQ96AQ1 378 aa19.79■□□□□ 0.76
TNFRSF1B-204ENST00000536782 ECHDC3Q96DC8 303 aa19.79■□□□□ 0.76
TNFRSF1B-204ENST00000536782 PEBP4Q96S96 227 aa19.79■□□□□ 0.76
TNFRSF1B-204ENST00000536782 KCTD15Q96SI1 283 aaPredicted RBP19.79■□□□□ 0.76
TNFRSF1B-204ENST00000536782 DGKBQ9Y6T7 804 aa19.79■□□□□ 0.76
TNFRSF1B-204ENST00000536782 UNC13CQ8NB66 2214 aa19.78■□□□□ 0.76
TNFRSF1B-204ENST00000536782 PMS2P1A4D2B8 440 aa19.78■□□□□ 0.76
TNFRSF1B-204ENST00000536782 TMEM191CA6NGB0 347 aa19.78■□□□□ 0.76
TNFRSF1B-204ENST00000536782 TEX33O43247 280 aa19.78■□□□□ 0.76
TNFRSF1B-204ENST00000536782 RECQL5O94762 991 aaPredicted RBP19.78■□□□□ 0.76
TNFRSF1B-204ENST00000536782 TNFSF15O95150 251 aa19.78■□□□□ 0.76
TNFRSF1B-204ENST00000536782 IL10RBQ08334 325 aa19.78■□□□□ 0.76
TNFRSF1B-204ENST00000536782 VAC14Q08AM6 782 aa19.78■□□□□ 0.76
TNFRSF1B-204ENST00000536782 PPP6R3Q5H9R7 873 aaPredicted RBP19.78■□□□□ 0.76
TNFRSF1B-204ENST00000536782 NYAP1Q6ZVC0 841 aa19.78■□□□□ 0.76
TNFRSF1B-204ENST00000536782 ARHGAP12Q8IWW6 846 aa19.78■□□□□ 0.76
TNFRSF1B-204ENST00000536782 ZNF843Q8N446 348 aa19.78■□□□□ 0.76
TNFRSF1B-204ENST00000536782 PLA2G15Q8NCC3 412 aa19.78■□□□□ 0.76
TNFRSF1B-204ENST00000536782 PDXPQ96GD0 296 aa19.78■□□□□ 0.76
TNFRSF1B-204ENST00000536782 LIN37Q96GY3 246 aaPredicted RBP19.78■□□□□ 0.76
TNFRSF1B-204ENST00000536782 GFM1Q96RP9 751 aaKnown RBP19.78■□□□□ 0.76
TNFRSF1B-204ENST00000536782 RBM15Q96T37 977 aaKnown RBP eCLIP19.78■□□□□ 0.76
TNFRSF1B-204ENST00000536782 RABGEF1Q9UJ41 708 aa19.78■□□□□ 0.76
TNFRSF1B-204ENST00000536782 SSUH2Q9Y2M2 353 aa19.78■□□□□ 0.76
TNFRSF1B-204ENST00000536782 LRRC53A6NM62 1247 aa19.77■□□□□ 0.76
TNFRSF1B-204ENST00000536782 TMX2-CTNND1H3BSU7 103 aa19.77■□□□□ 0.76
TNFRSF1B-204ENST00000536782 CACNB4O00305 520 aaPredicted RBP19.77■□□□□ 0.76
TNFRSF1B-204ENST00000536782 ELFN1P0C7U0 828 aa19.77■□□□□ 0.76
TNFRSF1B-204ENST00000536782 MIPP30301 263 aa19.77■□□□□ 0.76
TNFRSF1B-204ENST00000536782 HCAR3P49019 387 aa19.77■□□□□ 0.76
TNFRSF1B-204ENST00000536782 SCNN1BP51168 640 aa19.77■□□□□ 0.76
TNFRSF1B-204ENST00000536782 ZNF135P52742 658 aaPredicted RBP19.77■□□□□ 0.76
TNFRSF1B-204ENST00000536782 KIAA1024LP59773 190 aa19.77■□□□□ 0.76
TNFRSF1B-204ENST00000536782 CFHR1Q03591 330 aa19.77■□□□□ 0.76
TNFRSF1B-204ENST00000536782 RALGDSQ12967 914 aa19.77■□□□□ 0.76
TNFRSF1B-204ENST00000536782 ASIC2Q16515 512 aa19.77■□□□□ 0.76
TNFRSF1B-204ENST00000536782 CCDC183Q5T5S1 534 aa19.77■□□□□ 0.76
TNFRSF1B-204ENST00000536782 LIPIQ6XZB0 460 aa19.77■□□□□ 0.76
TNFRSF1B-204ENST00000536782 ARHGAP36Q6ZRI8 547 aa19.77■□□□□ 0.76
TNFRSF1B-204ENST00000536782 CLEC14AQ86T13 490 aa19.77■□□□□ 0.76
TNFRSF1B-204ENST00000536782 PSTKQ8IV42 348 aaKnown RBP19.77■□□□□ 0.76
TNFRSF1B-204ENST00000536782 NPWQ8N729 165 aa19.77■□□□□ 0.76
TNFRSF1B-204ENST00000536782 OR56A4Q8NGH8 313 aa19.77■□□□□ 0.76
TNFRSF1B-204ENST00000536782 FNIP1Q8TF40 1166 aa19.77■□□□□ 0.76
TNFRSF1B-204ENST00000536782 SNRNP27Q8WVK2 155 aaKnown RBP19.77■□□□□ 0.76
TNFRSF1B-204ENST00000536782 WBP1Q96G27 269 aa19.77■□□□□ 0.76
TNFRSF1B-204ENST00000536782 NAT10Q9H0A0 1025 aaKnown RBP19.77■□□□□ 0.76
TNFRSF1B-204ENST00000536782 HAUS4Q9H6D7 363 aa19.77■□□□□ 0.76
TNFRSF1B-204ENST00000536782 RTN4Q9NQC3 1192 aaKnown RBP19.77■□□□□ 0.76
TNFRSF1B-204ENST00000536782 ANKRD36A6QL64 1941 aa19.76■□□□□ 0.75
TNFRSF1B-204ENST00000536782 SCN8AQ9UQD0 1980 aa19.76■□□□□ 0.75
TNFRSF1B-204ENST00000536782 CAPN8A6NHC0 703 aa19.76■□□□□ 0.75
TNFRSF1B-204ENST00000536782 D6RAR5 112 aa19.76■□□□□ 0.75
TNFRSF1B-204ENST00000536782 FTLP02792 175 aaPredicted RBP19.76■□□□□ 0.75
TNFRSF1B-204ENST00000536782 RPLP0P05388 317 aaKnown RBP19.76■□□□□ 0.75
TNFRSF1B-204ENST00000536782 ITGA2BP08514 1039 aa19.76■□□□□ 0.75
TNFRSF1B-204ENST00000536782 GZMAP12544 262 aa19.76■□□□□ 0.75
TNFRSF1B-204ENST00000536782 KELP23276 732 aa19.76■□□□□ 0.75
TNFRSF1B-204ENST00000536782 RENBPP51606 427 aa19.76■□□□□ 0.75
TNFRSF1B-204ENST00000536782 AP1S1P61966 158 aa19.76■□□□□ 0.75
TNFRSF1B-204ENST00000536782 CCL7P80098 99 aa19.76■□□□□ 0.75
TNFRSF1B-204ENST00000536782 EIF3IQ13347 325 aaKnown RBP19.76■□□□□ 0.75
TNFRSF1B-204ENST00000536782 KCTD16Q68DU8 428 aa19.76■□□□□ 0.75
TNFRSF1B-204ENST00000536782 CYP4V2Q6ZWL3 525 aaPredicted RBP19.76■□□□□ 0.75
TNFRSF1B-204ENST00000536782 DPPA4Q7L190 304 aa19.76■□□□□ 0.75
TNFRSF1B-204ENST00000536782 LZTR1Q8N653 840 aa19.76■□□□□ 0.75
TNFRSF1B-204ENST00000536782 OR1E3Q8WZA6 343 aa19.76■□□□□ 0.75
TNFRSF1B-204ENST00000536782 FUBP1Q96AE4 644 aaKnown RBP19.76■□□□□ 0.75
TNFRSF1B-204ENST00000536782 PSKH2Q96QS6 385 aa19.76■□□□□ 0.75
TNFRSF1B-204ENST00000536782 TRIM7Q9C029 511 aa19.76■□□□□ 0.75
TNFRSF1B-204ENST00000536782 STRADBQ9C0K7 418 aa19.76■□□□□ 0.75
TNFRSF1B-204ENST00000536782 EPB41L5Q9HCM4 733 aa19.76■□□□□ 0.75
TNFRSF1B-204ENST00000536782 CNOT8Q9UFF9 292 aaKnown RBP19.76■□□□□ 0.75
TNFRSF1B-204ENST00000536782 SEPT3Q9UH03 358 aa19.76■□□□□ 0.75
TNFRSF1B-204ENST00000536782 A0A1W2PQM1 296 aa19.75■□□□□ 0.75
TNFRSF1B-204ENST00000536782 TMEM202A6NGA9 273 aa19.75■□□□□ 0.75
TNFRSF1B-204ENST00000536782 TRAFD1O14545 582 aaPredicted RBP19.75■□□□□ 0.75
TNFRSF1B-204ENST00000536782 PLD2O14939 933 aa19.75■□□□□ 0.75
TNFRSF1B-204ENST00000536782 MBD3O95983 291 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms