RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 GIMD1P0DJR0 217 aa17.98■□□□□ 0.47
TNFRSF1A-209ENST00000536717 MMP12P39900 470 aa17.98■□□□□ 0.47
TNFRSF1A-209ENST00000536717 AP1S1P61966 158 aa17.98■□□□□ 0.47
TNFRSF1A-209ENST00000536717 PDE1CQ14123 709 aaPredicted RBP17.98■□□□□ 0.47
TNFRSF1A-209ENST00000536717 PAFAH1B3Q15102 231 aaKnown RBP17.98■□□□□ 0.47
TNFRSF1A-209ENST00000536717 PDK2Q15119 407 aa17.98■□□□□ 0.47
TNFRSF1A-209ENST00000536717 ANKRD20A8PQ5CZ79 823 aa17.98■□□□□ 0.47
TNFRSF1A-209ENST00000536717 KCTD6Q8NC69 237 aa17.98■□□□□ 0.47
TNFRSF1A-209ENST00000536717 FAF2Q96CS3 445 aa17.98■□□□□ 0.47
TNFRSF1A-209ENST00000536717 MGME1Q9BQP7 344 aa17.98■□□□□ 0.47
TNFRSF1A-209ENST00000536717 KLF15Q9UIH9 416 aa17.98■□□□□ 0.47
TNFRSF1A-209ENST00000536717 TRIM38O00635 465 aa17.98■□□□□ 0.47
TNFRSF1A-209ENST00000536717 MAP3K6O95382 1288 aa17.98■□□□□ 0.47
TNFRSF1A-209ENST00000536717 C6P13671 934 aa17.98■□□□□ 0.47
TNFRSF1A-209ENST00000536717 HSPA9P38646 679 aaKnown RBP17.98■□□□□ 0.47
TNFRSF1A-209ENST00000536717 ACADVLP49748 655 aa17.98■□□□□ 0.47
TNFRSF1A-209ENST00000536717 MAXP61244 160 aa17.98■□□□□ 0.47
TNFRSF1A-209ENST00000536717 RALGDSQ12967 914 aa17.98■□□□□ 0.47
TNFRSF1A-209ENST00000536717 ST3GAL2Q16842 350 aa17.98■□□□□ 0.47
TNFRSF1A-209ENST00000536717 CCDC157Q569K6 752 aa17.98■□□□□ 0.47
TNFRSF1A-209ENST00000536717 TMPRSS7Q7RTY8 843 aa17.98■□□□□ 0.47
TNFRSF1A-209ENST00000536717 PARGQ86W56 976 aa17.98■□□□□ 0.47
TNFRSF1A-209ENST00000536717 MAP7D3Q8IWC1 876 aa17.98■□□□□ 0.47
TNFRSF1A-209ENST00000536717 PQLC3Q8N755 202 aa17.98■□□□□ 0.47
TNFRSF1A-209ENST00000536717 TRIM58Q8NG06 486 aa17.98■□□□□ 0.47
TNFRSF1A-209ENST00000536717 UBE2Q2Q8WVN8 375 aa17.98■□□□□ 0.47
TNFRSF1A-209ENST00000536717 RAPGEF5Q92565 580 aa17.98■□□□□ 0.47
TNFRSF1A-209ENST00000536717 DNAJC28Q9NX36 388 aa17.98■□□□□ 0.47
TNFRSF1A-209ENST00000536717 DDX56Q9NY93 547 aaKnown RBP17.98■□□□□ 0.47
TNFRSF1A-209ENST00000536717 PCDHGA1Q9Y5H4 931 aa17.98■□□□□ 0.47
TNFRSF1A-209ENST00000536717 ARHGEF17Q96PE2 2063 aaPredicted RBP17.97■□□□□ 0.47
TNFRSF1A-209ENST00000536717 CELSR3Q9NYQ7 3312 aa17.97■□□□□ 0.47
TNFRSF1A-209ENST00000536717 HTRA2O43464 458 aaPredicted RBP17.97■□□□□ 0.47
TNFRSF1A-209ENST00000536717 SIGLEC6O43699 453 aa17.97■□□□□ 0.47
TNFRSF1A-209ENST00000536717 CSF2P04141 144 aa17.97■□□□□ 0.47
TNFRSF1A-209ENST00000536717 NME1P15531 152 aaKnown RBP17.97■□□□□ 0.47
TNFRSF1A-209ENST00000536717 GARSP41250 739 aaKnown RBP17.97■□□□□ 0.47
TNFRSF1A-209ENST00000536717 LIG3P49916 1009 aa17.97■□□□□ 0.47
TNFRSF1A-209ENST00000536717 GALNT2Q10471 571 aa17.97■□□□□ 0.47
TNFRSF1A-209ENST00000536717 AGERQ15109 404 aa17.97■□□□□ 0.47
TNFRSF1A-209ENST00000536717 IRF4Q15306 451 aa17.97■□□□□ 0.47
TNFRSF1A-209ENST00000536717 PROX2Q3B8N5 592 aa17.97■□□□□ 0.47
TNFRSF1A-209ENST00000536717 ERAP2Q6P179 960 aa17.97■□□□□ 0.47
TNFRSF1A-209ENST00000536717 DHRS13Q6UX07 377 aa17.97■□□□□ 0.47
TNFRSF1A-209ENST00000536717 CCNI2Q6ZMN8 369 aaPredicted RBP17.97■□□□□ 0.47
TNFRSF1A-209ENST00000536717 NT5DC3Q86UY8 548 aa17.97■□□□□ 0.47
TNFRSF1A-209ENST00000536717 LRRC49Q8IUZ0 686 aa17.97■□□□□ 0.47
TNFRSF1A-209ENST00000536717 SPOCK2Q92563 424 aa17.97■□□□□ 0.47
TNFRSF1A-209ENST00000536717 NUDCD1Q96RS6 583 aa17.97■□□□□ 0.47
TNFRSF1A-209ENST00000536717 C1QTNF7Q9BXJ2 289 aa17.97■□□□□ 0.47
TNFRSF1A-209ENST00000536717 NOD2Q9HC29 1040 aa17.97■□□□□ 0.47
TNFRSF1A-209ENST00000536717 PNMA8BQ9ULN7 279 aaPredicted RBP17.97■□□□□ 0.47
TNFRSF1A-209ENST00000536717 PCDHGC4Q9Y5F7 938 aa17.97■□□□□ 0.47
TNFRSF1A-209ENST00000536717 APC2O95996 2303 aa17.96■□□□□ 0.47
TNFRSF1A-209ENST00000536717 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.96■□□□□ 0.47
TNFRSF1A-209ENST00000536717 CCDC66A2RUB6 948 aa17.96■□□□□ 0.47
TNFRSF1A-209ENST00000536717 FTCDO95954 541 aa17.96■□□□□ 0.47
TNFRSF1A-209ENST00000536717 KDELR1P24390 212 aa17.96■□□□□ 0.47
TNFRSF1A-209ENST00000536717 MMP13P45452 471 aa17.96■□□□□ 0.47
TNFRSF1A-209ENST00000536717 HNRNPKP61978 463 aaKnown RBP eCLIP17.96■□□□□ 0.472e-8■■■■■ 27.6
TNFRSF1A-209ENST00000536717 EIF2B5Q13144 721 aaKnown RBP17.96■□□□□ 0.47
TNFRSF1A-209ENST00000536717 WSCD2Q2TBF2 565 aa17.96■□□□□ 0.47
TNFRSF1A-209ENST00000536717 MARC1Q5VT66 337 aa17.96■□□□□ 0.47
TNFRSF1A-209ENST00000536717 BBS5Q8N3I7 341 aa17.96■□□□□ 0.47
TNFRSF1A-209ENST00000536717 TEX26Q8N6G2 289 aa17.96■□□□□ 0.47
TNFRSF1A-209ENST00000536717 KDF1Q8NAX2 398 aaPredicted RBP17.96■□□□□ 0.47
TNFRSF1A-209ENST00000536717 OR4C6Q8NH72 309 aa17.96■□□□□ 0.47
TNFRSF1A-209ENST00000536717 NSMCE1Q8WV22 266 aa17.96■□□□□ 0.47
TNFRSF1A-209ENST00000536717 CFAP47Q6ZTR5 3102 aa17.95■□□□□ 0.46
TNFRSF1A-209ENST00000536717 LRRD1A4D1F6 860 aa17.95■□□□□ 0.46
TNFRSF1A-209ENST00000536717 USP27XA6NNY8 438 aa17.95■□□□□ 0.46
TNFRSF1A-209ENST00000536717 MIF4GDA9UHW6 222 aaKnown RBP17.95■□□□□ 0.46
TNFRSF1A-209ENST00000536717 FFAR2O15552 330 aa17.95■□□□□ 0.46
TNFRSF1A-209ENST00000536717 KIF5CO60282 957 aa17.95■□□□□ 0.46
TNFRSF1A-209ENST00000536717 SOCS5O75159 536 aa17.95■□□□□ 0.46
TNFRSF1A-209ENST00000536717 RFPL3O75679 317 aa17.95■□□□□ 0.46
TNFRSF1A-209ENST00000536717 KRT1P04264 644 aa17.95■□□□□ 0.46
TNFRSF1A-209ENST00000536717 GM2AP17900 193 aa17.95■□□□□ 0.46
TNFRSF1A-209ENST00000536717 MSNP26038 577 aaKnown RBP17.95■□□□□ 0.46
TNFRSF1A-209ENST00000536717 CTNNA1P35221 906 aaKnown RBP17.95■□□□□ 0.46
TNFRSF1A-209ENST00000536717 YPEL5P62699 121 aa17.95■□□□□ 0.46
TNFRSF1A-209ENST00000536717 POLR2LP62875 67 aaKnown RBP17.95■□□□□ 0.46
TNFRSF1A-209ENST00000536717 GBE1Q04446 702 aa17.95■□□□□ 0.46
TNFRSF1A-209ENST00000536717 SLC10A2Q12908 348 aaPredicted RBP17.95■□□□□ 0.46
TNFRSF1A-209ENST00000536717 TRAF2Q12933 501 aa17.95■□□□□ 0.46
TNFRSF1A-209ENST00000536717 ZNF211Q13398 564 aaPredicted RBP17.95■□□□□ 0.46
TNFRSF1A-209ENST00000536717 LRRC14Q15048 493 aa17.95■□□□□ 0.46
TNFRSF1A-209ENST00000536717 SMAD1Q15797 465 aaKnown RBP17.95■□□□□ 0.46
TNFRSF1A-209ENST00000536717 LIPIQ6XZB0 460 aa17.95■□□□□ 0.46
TNFRSF1A-209ENST00000536717 UBL4BQ8N7F7 174 aa17.95■□□□□ 0.46
TNFRSF1A-209ENST00000536717 SCUBE2Q9NQ36 999 aa17.95■□□□□ 0.46
TNFRSF1A-209ENST00000536717 PCDHA3Q9Y5H8 950 aa17.95■□□□□ 0.46
TNFRSF1A-209ENST00000536717 LAMA5O15230 3695 aa17.94■□□□□ 0.46
TNFRSF1A-209ENST00000536717 CFAP69A5D8W1 941 aa17.94■□□□□ 0.46
TNFRSF1A-209ENST00000536717 NEBLO76041 1014 aa17.94■□□□□ 0.46
TNFRSF1A-209ENST00000536717 CKMT2P17540 419 aa17.94■□□□□ 0.46
TNFRSF1A-209ENST00000536717 CTNNA2P26232 953 aa17.94■□□□□ 0.46
TNFRSF1A-209ENST00000536717 DEKP35659 375 aaKnown RBP17.94■□□□□ 0.46
TNFRSF1A-209ENST00000536717 THOP1P52888 689 aa17.94■□□□□ 0.46
TNFRSF1A-209ENST00000536717 PTK2BQ14289 1009 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms