RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 BBS5Q8N3I7 341 aa14.36□□□□□ -0.11
RTN3P1-201ENST00000536295 NSMCE1Q8WV22 266 aa14.36□□□□□ -0.11
RTN3P1-201ENST00000536295 PACSIN1Q9BY11 444 aa14.36□□□□□ -0.11
RTN3P1-201ENST00000536295 NCKIPSDQ9NZQ3 722 aa14.36□□□□□ -0.11
RTN3P1-201ENST00000536295 B4GALT6Q9UBX8 382 aa14.36□□□□□ -0.11
RTN3P1-201ENST00000536295 KLQ9UEF7 1012 aa14.36□□□□□ -0.11
RTN3P1-201ENST00000536295 SALL4Q9UJQ4 1053 aa14.36□□□□□ -0.11
RTN3P1-201ENST00000536295 MYLKQ15746 1914 aa14.36□□□□□ -0.11
RTN3P1-201ENST00000536295 ANKRD11Q6UB99 2663 aaPredicted RBP14.36□□□□□ -0.11
RTN3P1-201ENST00000536295 LRRK1Q38SD2 2015 aa14.36□□□□□ -0.11
RTN3P1-201ENST00000536295 APC2O95996 2303 aa14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 LMO7DNF2Z398 122 aa14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 YY2O15391 372 aa14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 BRINP1O60477 761 aa14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 CSO75390 466 aaKnown RBP14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 RASGRP1O95267 797 aa14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 CPP00450 1065 aa14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 TGM2P21980 687 aa14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 IL4RP24394 825 aa14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 HSPA9P38646 679 aaKnown RBP14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 MMP13P45452 471 aa14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 BLKP51451 505 aa14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 HK3P52790 923 aa14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 SRP54P61011 504 aaKnown RBP14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 MTM1Q13496 603 aa14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 RTP5Q14D33 572 aa14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 ACOX1Q15067 660 aa14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 AGERQ15109 404 aa14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 ATP13A4Q4VNC1 1196 aa14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 C6orf132Q5T0Z8 1188 aa14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 MARC1Q5VT66 337 aa14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 CDCP2Q5VXM1 449 aa14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 DENND2CQ68D51 928 aa14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 SLC35F3Q8IY50 421 aa14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 CACTIN-AS1Q8N1I8 211 aa14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 GLMNQ92990 594 aa14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 DEPDC7Q96QD5 511 aa14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 NUDCD1Q96RS6 583 aa14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 BOCQ9BWV1 1114 aa14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 DEF6Q9H4E7 631 aa14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 NOD2Q9HC29 1040 aa14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 SIRPGQ9P1W8 387 aa14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 GULP1Q9UBP9 304 aa14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 NENFQ9UMX5 172 aa14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 LAMA5O15230 3695 aa14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 DSPP15924 2871 aaKnown RBP14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 ANKRD36A6QL64 1941 aa14.35□□□□□ -0.11
RTN3P1-201ENST00000536295 EME2A4GXA9 379 aaPredicted RBP14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 CFAP69A5D8W1 941 aa14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 CACNB4O00305 520 aaPredicted RBP14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 CBFA2T2O43439 604 aa14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 TLX3O43711 291 aaPredicted RBP14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 MFSD11O43934 449 aa14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 MAP3K6O95382 1288 aa14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 H2AFZP0C0S5 128 aa14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 CR2P20023 1033 aa14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 HNRNPH3P31942 346 aaKnown RBP14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 RPIAP49247 311 aa14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 ITKQ08881 620 aa14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 TRAF2Q12933 501 aa14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 DPYSL3Q14195 570 aa14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 ELOCQ15369 112 aa14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 SKOR2Q2VWA4 1001 aaPredicted RBP14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 PERM1Q5SV97 790 aa14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 ZFYVE27Q5T4F4 411 aa14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 KCTD16Q68DU8 428 aa14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 SPECC1LQ69YQ0 1117 aa14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 H2AFVQ71UI9 128 aa14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 PDZD3Q86UT5 571 aa14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 FSTL5Q8N475 847 aaPredicted RBP14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 KCTD6Q8NC69 237 aa14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 ATL2Q8NHH9 583 aa14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 PCDH19Q8TAB3 1148 aa14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 CTNNBL1Q8WYA6 563 aaPredicted RBP14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 FUBP1Q96AE4 644 aaKnown RBP14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 PDXPQ96GD0 296 aa14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 TBATAQ96M53 351 aa14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 WDR92Q96MX6 357 aa14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 MGME1Q9BQP7 344 aa14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 SYNDIG1Q9H7V2 258 aa14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 NT5MQ9NPB1 228 aa14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 RCOR3Q9P2K3 495 aaPredicted RBP14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 ADAMTS20P59510 1910 aa14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 KNTC1P50748 2209 aa14.34□□□□□ -0.11
RTN3P1-201ENST00000536295 ACACAQ13085 2346 aa14.33□□□□□ -0.11
RTN3P1-201ENST00000536295 A0A087WV48 116 aa14.33□□□□□ -0.12
RTN3P1-201ENST00000536295 HTRA2O43464 458 aaPredicted RBP14.33□□□□□ -0.12
RTN3P1-201ENST00000536295 SOCS5O75159 536 aa14.33□□□□□ -0.12
RTN3P1-201ENST00000536295 USP12O75317 370 aa14.33□□□□□ -0.12
RTN3P1-201ENST00000536295 PROSCO94903 275 aa14.33□□□□□ -0.12
RTN3P1-201ENST00000536295 TNFP01375 233 aa14.33□□□□□ -0.12
RTN3P1-201ENST00000536295 MPOP05164 745 aa14.33□□□□□ -0.12
RTN3P1-201ENST00000536295 ALPIP09923 528 aa14.33□□□□□ -0.12
RTN3P1-201ENST00000536295 GM2AP17900 193 aa14.33□□□□□ -0.12
RTN3P1-201ENST00000536295 ARSEP51690 589 aa14.33□□□□□ -0.12
RTN3P1-201ENST00000536295 TAS2R40P59535 323 aa14.33□□□□□ -0.12
RTN3P1-201ENST00000536295 PTPRRQ15256 657 aa14.33□□□□□ -0.12
RTN3P1-201ENST00000536295 SLC18A3Q16572 532 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms