RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 EIF3EP60228 445 aaKnown RBP22.84■■□□□ 1.25
SFSWAP-204ENST00000535399 OVGP1Q12889 678 aa22.84■■□□□ 1.25
SFSWAP-204ENST00000535399 HLA-BQ31612 363 aa22.84■■□□□ 1.25
SFSWAP-204ENST00000535399 ABI3BPQ7Z7G0 1075 aa22.84■■□□□ 1.25
SFSWAP-204ENST00000535399 DENND6BQ8NEG7 585 aa22.84■■□□□ 1.25
SFSWAP-204ENST00000535399 HTR3CQ8WXA8 447 aa22.84■■□□□ 1.25
SFSWAP-204ENST00000535399 SKA1Q96BD8 255 aa22.84■■□□□ 1.25
SFSWAP-204ENST00000535399 TADA1Q96BN2 335 aa22.84■■□□□ 1.25
SFSWAP-204ENST00000535399 BMFQ96LC9 184 aa22.84■■□□□ 1.25
SFSWAP-204ENST00000535399 SLC25A51Q9H1U9 297 aa22.84■■□□□ 1.25
SFSWAP-204ENST00000535399 GAREM1Q9H706 876 aa22.84■■□□□ 1.25
SFSWAP-204ENST00000535399 CHKBQ9Y259 395 aa22.84■■□□□ 1.25
SFSWAP-204ENST00000535399 COQ6Q9Y2Z9 468 aa22.84■■□□□ 1.25
SFSWAP-204ENST00000535399 HS3ST3A1Q9Y663 406 aa22.84■■□□□ 1.25
SFSWAP-204ENST00000535399 SPTBN4Q9H254 2564 aa22.84■■□□□ 1.25
SFSWAP-204ENST00000535399 PLXNA2O75051 1894 aa22.83■■□□□ 1.25
SFSWAP-204ENST00000535399 TCRBV7S2A1N4TA0A589 114 aa22.83■■□□□ 1.25
SFSWAP-204ENST00000535399 RBL1P28749 1068 aa22.83■■□□□ 1.25
SFSWAP-204ENST00000535399 PTPRRQ15256 657 aa22.83■■□□□ 1.25
SFSWAP-204ENST00000535399 LIPIQ6XZB0 460 aa22.83■■□□□ 1.25
SFSWAP-204ENST00000535399 SPATS2Q86XZ4 545 aaKnown RBP22.83■■□□□ 1.25
SFSWAP-204ENST00000535399 CENPTQ96BT3 561 aa22.83■■□□□ 1.25
SFSWAP-204ENST00000535399 MCCC1Q96RQ3 725 aaPredicted RBP22.83■■□□□ 1.25
SFSWAP-204ENST00000535399 RBM15Q96T37 977 aaKnown RBP eCLIP22.83■■□□□ 1.251e-7■■■■□ 22
SFSWAP-204ENST00000535399 VAT1Q99536 393 aa22.83■■□□□ 1.25
SFSWAP-204ENST00000535399 FNDC3AQ9Y2H6 1198 aaKnown RBP22.83■■□□□ 1.25
SFSWAP-204ENST00000535399 TRPM6Q9BX84 2022 aa22.82■■□□□ 1.24
SFSWAP-204ENST00000535399 POM121BA6NF01 834 aa22.82■■□□□ 1.24
SFSWAP-204ENST00000535399 A8MX80 341 aa22.82■■□□□ 1.24
SFSWAP-204ENST00000535399 KCNK3O14649 394 aa22.82■■□□□ 1.24
SFSWAP-204ENST00000535399 OPHN1O60890 802 aa22.82■■□□□ 1.24
SFSWAP-204ENST00000535399 CER1O95813 267 aa22.82■■□□□ 1.24
SFSWAP-204ENST00000535399 RBP3P10745 1247 aa22.82■■□□□ 1.24
SFSWAP-204ENST00000535399 CA4P22748 312 aa22.82■■□□□ 1.24
SFSWAP-204ENST00000535399 VIPR1P32241 457 aa22.82■■□□□ 1.24
SFSWAP-204ENST00000535399 ZNF423Q2M1K9 1284 aa22.82■■□□□ 1.24
SFSWAP-204ENST00000535399 UAP1L1Q3KQV9 507 aa22.82■■□□□ 1.24
SFSWAP-204ENST00000535399 KYAT3Q6YP21 454 aaKnown RBP22.82■■□□□ 1.24
SFSWAP-204ENST00000535399 CDKL3Q8IVW4 592 aaPredicted RBP22.82■■□□□ 1.24
SFSWAP-204ENST00000535399 ZNF567Q8N184 647 aa22.82■■□□□ 1.24
SFSWAP-204ENST00000535399 TTC13Q8NBP0 860 aa22.82■■□□□ 1.24
SFSWAP-204ENST00000535399 TP53I13Q8NBR0 393 aaPredicted RBP22.82■■□□□ 1.24
SFSWAP-204ENST00000535399 OR13H1Q8NG92 308 aa22.82■■□□□ 1.24
SFSWAP-204ENST00000535399 SCRN2Q96FV2 425 aa22.82■■□□□ 1.24
SFSWAP-204ENST00000535399 KLHDC7BQ96G42 594 aa22.82■■□□□ 1.24
SFSWAP-204ENST00000535399 SMIM14Q96QK8 99 aa22.82■■□□□ 1.24
SFSWAP-204ENST00000535399 RTKNQ9BST9 563 aa22.82■■□□□ 1.24
SFSWAP-204ENST00000535399 TLR10Q9BXR5 811 aa22.82■■□□□ 1.24
SFSWAP-204ENST00000535399 PCDH9Q9HC56 1237 aa22.82■■□□□ 1.24
SFSWAP-204ENST00000535399 R3HDM2Q9Y2K5 976 aaKnown RBP22.82■■□□□ 1.24
SFSWAP-204ENST00000535399 DOCK9Q9BZ29 2069 aa22.81■■□□□ 1.24
SFSWAP-204ENST00000535399 GOLGA6L9A6NEM1 432 aa22.81■■□□□ 1.24
SFSWAP-204ENST00000535399 NPIPB15A6NHN6 443 aaPredicted RBP22.81■■□□□ 1.24
SFSWAP-204ENST00000535399 CTPS1P17812 591 aa22.81■■□□□ 1.24
SFSWAP-204ENST00000535399 GM2AP17900 193 aa22.81■■□□□ 1.24
SFSWAP-204ENST00000535399 LHCGRP22888 699 aa22.81■■□□□ 1.24
SFSWAP-204ENST00000535399 IGFALSP35858 605 aa22.81■■□□□ 1.24
SFSWAP-204ENST00000535399 ID4P47928 161 aa22.81■■□□□ 1.24
SFSWAP-204ENST00000535399 RPL26P61254 145 aaKnown RBP22.81■■□□□ 1.24
SFSWAP-204ENST00000535399 AGERQ15109 404 aa22.81■■□□□ 1.24
SFSWAP-204ENST00000535399 SLC14A2Q15849 920 aa22.81■■□□□ 1.24
SFSWAP-204ENST00000535399 WSCD2Q2TBF2 565 aa22.81■■□□□ 1.24
SFSWAP-204ENST00000535399 SEL1L2Q5TEA6 688 aa22.81■■□□□ 1.24
SFSWAP-204ENST00000535399 KDM7AQ6ZMT4 941 aa22.81■■□□□ 1.24
SFSWAP-204ENST00000535399 SPATA22Q8NHS9 363 aa22.81■■□□□ 1.24
SFSWAP-204ENST00000535399 C1QTNF7Q9BXJ2 289 aa22.81■■□□□ 1.24
SFSWAP-204ENST00000535399 CARD9Q9H257 536 aa22.81■■□□□ 1.24
SFSWAP-204ENST00000535399 GDF3Q9NR23 364 aa22.81■■□□□ 1.24
SFSWAP-204ENST00000535399 MBNL1Q9NR56 388 aaKnown RBP22.81■■□□□ 1.24
SFSWAP-204ENST00000535399 KLHL8Q9P2G9 620 aaPredicted RBP22.81■■□□□ 1.24
SFSWAP-204ENST00000535399 RPL26L1Q9UNX3 145 aaKnown RBP22.81■■□□□ 1.24
SFSWAP-204ENST00000535399 A6NNZ2 444 aa22.8■■□□□ 1.24
SFSWAP-204ENST00000535399 FPGTO14772 594 aa22.8■■□□□ 1.24
SFSWAP-204ENST00000535399 ZSCAN12O43309 604 aa22.8■■□□□ 1.24
SFSWAP-204ENST00000535399 LZTS3O60299 673 aaPredicted RBP22.8■■□□□ 1.24
SFSWAP-204ENST00000535399 MAGEC1O60732 1142 aa22.8■■□□□ 1.24
SFSWAP-204ENST00000535399 HEXIM1O94992 359 aaKnown RBP22.8■■□□□ 1.24
SFSWAP-204ENST00000535399 ALPIP09923 528 aa22.8■■□□□ 1.24
SFSWAP-204ENST00000535399 ELFN1P0C7U0 828 aa22.8■■□□□ 1.24
SFSWAP-204ENST00000535399 THEGLP0DJG4 465 aa22.8■■□□□ 1.24
SFSWAP-204ENST00000535399 CYP2A6P11509 494 aaPredicted RBP22.8■■□□□ 1.24
SFSWAP-204ENST00000535399 NFKB1P19838 968 aa22.8■■□□□ 1.24
SFSWAP-204ENST00000535399 PUM1Q14671 1186 aaKnown RBP eCLIP22.8■■□□□ 1.248e-14■■□□□ 11.8
SFSWAP-204ENST00000535399 CNGA3Q16281 694 aa22.8■■□□□ 1.24
SFSWAP-204ENST00000535399 DARS2Q6PI48 645 aaKnown RBP22.8■■□□□ 1.24
SFSWAP-204ENST00000535399 Q6ZSR6 202 aa22.8■■□□□ 1.24
SFSWAP-204ENST00000535399 USP45Q70EL2 814 aa22.8■■□□□ 1.24
SFSWAP-204ENST00000535399 PID1Q7Z2X4 250 aa22.8■■□□□ 1.24
SFSWAP-204ENST00000535399 SLC13A5Q86YT5 568 aaPredicted RBP22.8■■□□□ 1.24
SFSWAP-204ENST00000535399 CBARPQ8N350 705 aaPredicted RBP22.8■■□□□ 1.24
SFSWAP-204ENST00000535399 LPCAT1Q8NF37 534 aa22.8■■□□□ 1.24
SFSWAP-204ENST00000535399 FAM174AQ8TBP5 190 aa22.8■■□□□ 1.24
SFSWAP-204ENST00000535399 TRIB3Q96RU7 358 aa22.8■■□□□ 1.24
SFSWAP-204ENST00000535399 USP29Q9HBJ7 922 aa22.8■■□□□ 1.24
SFSWAP-204ENST00000535399 GPR27Q9NS67 375 aa22.8■■□□□ 1.24
SFSWAP-204ENST00000535399 TRHDEQ9UKU6 1024 aa22.8■■□□□ 1.24
SFSWAP-204ENST00000535399 A0A0J9YYE9 177 aa22.79■■□□□ 1.24
SFSWAP-204ENST00000535399 RECQL5O94762 991 aaPredicted RBP22.79■■□□□ 1.24
SFSWAP-204ENST00000535399 MT-CYBP00156 380 aaPredicted RBP22.79■■□□□ 1.24
SFSWAP-204ENST00000535399 TRBC1P01850 177 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms