RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-233ENST00000534636 SRP54P61011 504 aaKnown RBP18.58■□□□□ 0.56
CTSB-233ENST00000534636 IL10RBQ08334 325 aa18.58■□□□□ 0.56
CTSB-233ENST00000534636 KLHL30Q0D2K2 578 aa18.58■□□□□ 0.56
CTSB-233ENST00000534636 AGERQ15109 404 aa18.58■□□□□ 0.56
CTSB-233ENST00000534636 TCEA2Q15560 299 aa18.58■□□□□ 0.56
CTSB-233ENST00000534636 FOXR1Q6PIV2 292 aa18.58■□□□□ 0.56
CTSB-233ENST00000534636 IGF2-ASQ6U949 168 aa18.58■□□□□ 0.56
CTSB-233ENST00000534636 ARL14Q8N4G2 192 aa18.58■□□□□ 0.56
CTSB-233ENST00000534636 LZTR1Q8N653 840 aa18.58■□□□□ 0.56
CTSB-233ENST00000534636 KYQ8NBH2 561 aa18.58■□□□□ 0.56
CTSB-233ENST00000534636 CCDC97Q96F63 343 aaPredicted RBP18.58■□□□□ 0.56
CTSB-233ENST00000534636 SEPT3Q9UH03 358 aa18.58■□□□□ 0.56
CTSB-233ENST00000534636 GPR34Q9UPC5 381 aa18.58■□□□□ 0.56
CTSB-233ENST00000534636 PCDHGA8Q9Y5G5 932 aa18.58■□□□□ 0.56
CTSB-233ENST00000534636 ENTPD2Q9Y5L3 495 aa18.58■□□□□ 0.56
CTSB-233ENST00000534636 ATMQ13315 3056 aa18.58■□□□□ 0.56
CTSB-233ENST00000534636 A0A1W2PQC6 194 aa18.57■□□□□ 0.56
CTSB-233ENST00000534636 H3BRJ5 948 aa18.57■□□□□ 0.56
CTSB-233ENST00000534636 TNFP01375 233 aa18.57■□□□□ 0.56
CTSB-233ENST00000534636 PRKCGP05129 697 aa18.57■□□□□ 0.56
CTSB-233ENST00000534636 CELA2BP08218 269 aaPredicted RBP18.57■□□□□ 0.56
CTSB-233ENST00000534636 KELP23276 732 aa18.57■□□□□ 0.56
CTSB-233ENST00000534636 NFKBIAP25963 317 aa18.57■□□□□ 0.56
CTSB-233ENST00000534636 ARL4AP40617 200 aa18.57■□□□□ 0.56
CTSB-233ENST00000534636 RGRP47804 291 aa18.57■□□□□ 0.56
CTSB-233ENST00000534636 SCNN1BP51168 640 aa18.57■□□□□ 0.56
CTSB-233ENST00000534636 AP1S1P61966 158 aa18.57■□□□□ 0.56
CTSB-233ENST00000534636 NSUN2Q08J23 767 aaKnown RBP eCLIP18.57■□□□□ 0.56
CTSB-233ENST00000534636 C19orf57Q0VDD7 668 aa18.57■□□□□ 0.56
CTSB-233ENST00000534636 ZNF235Q14590 738 aa18.57■□□□□ 0.56
CTSB-233ENST00000534636 TMCO4Q5TGY1 634 aa18.57■□□□□ 0.56
CTSB-233ENST00000534636 AFMIDQ63HM1 303 aa18.57■□□□□ 0.56
CTSB-233ENST00000534636 ZNF571Q7Z3V5 609 aaPredicted RBP18.57■□□□□ 0.56
CTSB-233ENST00000534636 LSM14AQ8ND56 463 aaKnown RBP18.57■□□□□ 0.56
CTSB-233ENST00000534636 OR6C4Q8NGE1 309 aa18.57■□□□□ 0.56
CTSB-233ENST00000534636 WDR36Q8NI36 951 aaKnown RBP18.57■□□□□ 0.56
CTSB-233ENST00000534636 DPH1Q9BZG8 443 aa18.57■□□□□ 0.56
CTSB-233ENST00000534636 ASCL3Q9NQ33 180 aa18.57■□□□□ 0.56
CTSB-233ENST00000534636 AIPL1Q9NZN9 384 aa18.57■□□□□ 0.56
CTSB-233ENST00000534636 UNC13CQ8NB66 2214 aa18.57■□□□□ 0.56
CTSB-233ENST00000534636 KLK10O43240 276 aa18.56■□□□□ 0.56
CTSB-233ENST00000534636 LRCH4O75427 683 aa18.56■□□□□ 0.56
CTSB-233ENST00000534636 PRKCIP41743 596 aa18.56■□□□□ 0.56
CTSB-233ENST00000534636 HCAR3P49019 387 aa18.56■□□□□ 0.56
CTSB-233ENST00000534636 KIAA1024LP59773 190 aa18.56■□□□□ 0.56
CTSB-233ENST00000534636 ZSWIM9Q86XI8 627 aa18.56■□□□□ 0.56
CTSB-233ENST00000534636 ARHGAP12Q8IWW6 846 aa18.56■□□□□ 0.56
CTSB-233ENST00000534636 BBS5Q8N3I7 341 aa18.56■□□□□ 0.56
CTSB-233ENST00000534636 ARFGAP1Q8N6T3 406 aa18.56■□□□□ 0.56
CTSB-233ENST00000534636 NPWQ8N729 165 aa18.56■□□□□ 0.56
CTSB-233ENST00000534636 ZNF599Q96NL3 588 aa18.56■□□□□ 0.56
CTSB-233ENST00000534636 GFM1Q96RP9 751 aaKnown RBP18.56■□□□□ 0.56
CTSB-233ENST00000534636 MYO1AQ9UBC5 1043 aa18.56■□□□□ 0.56
CTSB-233ENST00000534636 HELZ2Q9BYK8 2649 aaKnown RBP18.55■□□□□ 0.56
CTSB-233ENST00000534636 CCDC187A0A096LP49 1063 aa18.55■□□□□ 0.56
CTSB-233ENST00000534636 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.55■□□□□ 0.56
CTSB-233ENST00000534636 RECQL5O94762 991 aaPredicted RBP18.55■□□□□ 0.56
CTSB-233ENST00000534636 SERPINC1P01008 464 aa18.55■□□□□ 0.56
CTSB-233ENST00000534636 PCK1P35558 622 aa18.55■□□□□ 0.56
CTSB-233ENST00000534636 HSPA9P38646 679 aaKnown RBP18.55■□□□□ 0.56
CTSB-233ENST00000534636 MLLT3P42568 568 aaPredicted RBP18.55■□□□□ 0.56
CTSB-233ENST00000534636 RALGDSQ12967 914 aa18.55■□□□□ 0.56
CTSB-233ENST00000534636 DPYSQ14117 519 aa18.55■□□□□ 0.56
CTSB-233ENST00000534636 LBRQ14739 615 aaKnown RBP18.55■□□□□ 0.56
CTSB-233ENST00000534636 TMCO3Q6UWJ1 677 aa18.55■□□□□ 0.56
CTSB-233ENST00000534636 ARHGAP36Q6ZRI8 547 aa18.55■□□□□ 0.56
CTSB-233ENST00000534636 DPPA4Q7L190 304 aa18.55■□□□□ 0.56
CTSB-233ENST00000534636 OR56A4Q8NGH8 313 aa18.55■□□□□ 0.56
CTSB-233ENST00000534636 NSMCE1Q8WV22 266 aa18.55■□□□□ 0.56
CTSB-233ENST00000534636 CCDC74AQ96AQ1 378 aa18.55■□□□□ 0.56
CTSB-233ENST00000534636 ECHDC3Q96DC8 303 aa18.55■□□□□ 0.56
CTSB-233ENST00000534636 PDXPQ96GD0 296 aa18.55■□□□□ 0.56
CTSB-233ENST00000534636 SLC46A1Q96NT5 459 aa18.55■□□□□ 0.56
CTSB-233ENST00000534636 PSKH2Q96QS6 385 aa18.55■□□□□ 0.56
CTSB-233ENST00000534636 RBM15Q96T37 977 aaKnown RBP eCLIP18.55■□□□□ 0.569e-7■■■■□ 22.2
CTSB-233ENST00000534636 TRIM7Q9C029 511 aa18.55■□□□□ 0.56
CTSB-233ENST00000534636 STRADBQ9C0K7 418 aa18.55■□□□□ 0.56
CTSB-233ENST00000534636 WDR26Q9H7D7 661 aa18.55■□□□□ 0.56
CTSB-233ENST00000534636 CWC15Q9P013 229 aaKnown RBP18.55■□□□□ 0.56
CTSB-233ENST00000534636 TMEM63CQ9P1W3 806 aa18.55■□□□□ 0.56
CTSB-233ENST00000534636 DGKBQ9Y6T7 804 aa18.55■□□□□ 0.56
CTSB-233ENST00000534636 A0A1W2PQ67 120 aa18.54■□□□□ 0.56
CTSB-233ENST00000534636 TMX2-CTNND1H3BSU7 103 aa18.54■□□□□ 0.56
CTSB-233ENST00000534636 ZNF165P49910 485 aa18.54■□□□□ 0.56
CTSB-233ENST00000534636 EIF3IQ13347 325 aaKnown RBP18.54■□□□□ 0.56
CTSB-233ENST00000534636 ACOX1Q15067 660 aa18.54■□□□□ 0.56
CTSB-233ENST00000534636 DPYSL2Q16555 572 aa18.54■□□□□ 0.56
CTSB-233ENST00000534636 SMTNL2Q2TAL5 461 aa18.54■□□□□ 0.56
CTSB-233ENST00000534636 TAF1BQ53T94 588 aaPredicted RBP18.54■□□□□ 0.56
CTSB-233ENST00000534636 TDRD12Q587J7 1177 aaKnown RBP18.54■□□□□ 0.56
CTSB-233ENST00000534636 LIPIQ6XZB0 460 aa18.54■□□□□ 0.56
CTSB-233ENST00000534636 CYP4V2Q6ZWL3 525 aaPredicted RBP18.54■□□□□ 0.56
CTSB-233ENST00000534636 TAF8Q7Z7C8 310 aa18.54■□□□□ 0.56
CTSB-233ENST00000534636 PLA2G15Q8NCC3 412 aa18.54■□□□□ 0.56
CTSB-233ENST00000534636 PDCD6IPQ8WUM4 868 aaKnown RBP18.54■□□□□ 0.56
CTSB-233ENST00000534636 HSPH1Q92598 858 aa18.54■□□□□ 0.56
CTSB-233ENST00000534636 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.54■□□□□ 0.56
CTSB-233ENST00000534636 ARHGEF17Q96PE2 2063 aaPredicted RBP18.54■□□□□ 0.56
CTSB-233ENST00000534636 A0A1B0GTH6 734 aa18.53■□□□□ 0.56
CTSB-233ENST00000534636 D6RAR5 112 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms