RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 CENPHQ9H3R5 247 aa11.02□□□□□ -0.65
CCDC90B-218ENST00000533761 ATP13A3Q9H7F0 1226 aa11.02□□□□□ -0.65
CCDC90B-218ENST00000533761 TBC1D17Q9HA65 648 aa11.02□□□□□ -0.65
CCDC90B-218ENST00000533761 MRM3Q9HC36 420 aaKnown RBP11.02□□□□□ -0.65
CCDC90B-218ENST00000533761 LTB4R2Q9NPC1 389 aa11.02□□□□□ -0.65
CCDC90B-218ENST00000533761 TXNDC16Q9P2K2 825 aa11.02□□□□□ -0.65
CCDC90B-218ENST00000533761 NDRG2Q9UN36 371 aaKnown RBP11.02□□□□□ -0.65
CCDC90B-218ENST00000533761 RPL26L1Q9UNX3 145 aaKnown RBP11.02□□□□□ -0.65
CCDC90B-218ENST00000533761 STARD13Q9Y3M8 1113 aa11.02□□□□□ -0.65
CCDC90B-218ENST00000533761 COL4A3Q01955 1670 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 KIAA1549LQ6ZVL6 1849 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 FAM237BA0A1B0GVD1 139 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 FAM170BA6NMN3 283 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 PRRT4C9JH25 899 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 K7EQS6 105 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 NPC1O15118 1278 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 SOCS5O75159 536 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 USP12O75317 370 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 NDST3O95803 873 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 GSRP00390 522 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 DLDP09622 509 aaKnown RBP11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 ADRA1DP25100 572 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 SERPINA4P29622 427 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 ADRA1AP35348 466 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 MESP2Q0VG99 397 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 CCINQ13939 588 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 FRG1Q14331 258 aaKnown RBP11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 LRRC32Q14392 662 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 SPARCL1Q14515 664 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 RASA2Q15283 850 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 CYTH1Q15438 398 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 SLC1A5Q15758 541 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 FUT11Q495W5 492 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 HP1BP3Q5SSJ5 553 aaPredicted RBP11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 FSTL4Q6MZW2 842 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 KDELC1Q6UW63 502 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 LEKR1Q6ZMV7 388 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 LRRC6Q86X45 466 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 KDM1BQ8NB78 822 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 OR2AP1Q8NGE2 309 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 TTC17Q96AE7 1141 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 TADA1Q96BN2 335 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 PGM2Q96G03 612 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 ZNF419Q96HQ0 510 aaPredicted RBP11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 GORASP1Q9BQQ3 440 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 PPANQ9NQ55 473 aaKnown RBP11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 NSMCE4AQ9NXX6 385 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 PSMC3IPQ9P2W1 217 aaPredicted RBP11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 INTS6Q9UL03 887 aaKnown RBP11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 SOX13Q9UN79 622 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 SIT1Q9Y3P8 196 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 RPS6KL1Q9Y6S9 549 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 MIA3Q5JRA6 1907 aa11.01□□□□□ -0.65
CCDC90B-218ENST00000533761 MUC3AQ02505 3323 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 LOC285095A0A1B0GVY8 99 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 TCRBV9S1A1TA0A576 114 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 ATP9BO43861 1147 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 CRTAMO95727 393 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 AGTP01019 485 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 EGFP01133 1207 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 INHBAP08476 426 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 CHRNB1P11230 501 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 CR2P20023 1033 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 SSTR1P30872 391 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 GRIA1P42261 906 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 MSH2P43246 934 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 EPHB1P54762 984 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 BCL2L1Q07817 233 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 NIPAL4Q0D2K0 466 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 MTM1Q13496 603 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 CRYMQ14894 314 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 ACCSLQ4AC99 568 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 AGBL2Q5U5Z8 902 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 STEAP4Q687X5 459 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 TMEM215Q68D42 235 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 CAPN12Q6ZSI9 719 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 SRLQ86TD4 932 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 TDRPQ86YL5 185 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 PGBD5Q8N414 524 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 RYBPQ8N488 228 aaPredicted RBP11□□□□□ -0.65
CCDC90B-218ENST00000533761 SH2D3CQ8N5H7 860 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 ZNF513Q8N8E2 541 aaPredicted RBP11□□□□□ -0.65
CCDC90B-218ENST00000533761 SERBP1Q8NC51 408 aaKnown RBP eCLIP11□□□□□ -0.65
CCDC90B-218ENST00000533761 FBF1Q8TES7 1133 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 RMDN1Q96DB5 314 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 RANBP9Q96S59 729 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 TDRD1Q9BXT4 1180 aaKnown RBP11□□□□□ -0.65
CCDC90B-218ENST00000533761 EPB41L4BQ9H329 900 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 NOD2Q9HC29 1040 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 SYBUQ9NX95 663 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 HACD3Q9P035 362 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 SENP1Q9P0U3 644 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 NFS1Q9Y697 457 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 FAM169AQ9Y6X4 670 aa11□□□□□ -0.65
CCDC90B-218ENST00000533761 IQANK1A0A1B0GTG1 560 aa10.99□□□□□ -0.65
CCDC90B-218ENST00000533761 TLDC2A0PJX2 215 aa10.99□□□□□ -0.65
CCDC90B-218ENST00000533761 TMEM221A6NGB7 291 aa10.99□□□□□ -0.65
CCDC90B-218ENST00000533761 M0R296 226 aa10.99□□□□□ -0.65
CCDC90B-218ENST00000533761 PAPSS2O95340 614 aaPredicted RBP10.99□□□□□ -0.65
CCDC90B-218ENST00000533761 POP4O95707 220 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms