RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 ALADP13716 330 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 NUDT2P50583 147 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 PTP4A2Q12974 167 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 HNRNPDQ14103 355 aaKnown RBP11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 GALNTL6Q49A17 601 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 YTHDF3Q7Z739 585 aaKnown RBP11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 OR4L1Q8NH43 312 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 JOSD2Q8TAC2 188 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 METTL6Q8TCB7 284 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 TRIM63Q969Q1 353 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 MS4A4AQ96JQ5 239 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 THUMPD3Q9BV44 507 aaKnown RBP11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 HERC2P3Q9BVR0 1158 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 B3GNT5Q9BYG0 378 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 BCO2Q9BYV7 579 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 PAIP1Q9H074 479 aaKnown RBP11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 SLC25A51Q9H1U9 297 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 AGO3Q9H9G7 860 aaKnown RBP11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 PCYOX1Q9UHG3 505 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 KCNE2Q9Y6J6 123 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 DNAJC25-GNG10A0A024R161 153 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 FSCN2O14926 492 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 AP5Z1O43299 807 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 USP1O94782 785 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 GTF2E2P29084 291 aaKnown RBP11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 DCTN2Q13561 401 aaKnown RBP11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 ZNHIT3Q15649 155 aaPredicted RBP11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 NDUFA9Q16795 377 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 PPP4R4Q6NUP7 873 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 VITQ6UXI7 678 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 RAVER1Q8IY67 606 aaKnown RBP11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 ZNF398Q8TD17 642 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 FAM136AQ96C01 138 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 ZNF514Q96K75 400 aaPredicted RBP11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 FAM83DQ9H4H8 585 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 FBXW11Q9UKB1 542 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 HEBP2Q9Y5Z4 205 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 GLYATL1P3A0A0U1RQE8 302 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 ISM1B1AKI9 464 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 AVILO75366 819 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 SPIDRQ14159 915 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 NOMO1Q15155 1222 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 PTPRNQ16849 979 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 ITPRIPL2Q3MIP1 535 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 POM121L1PQ3SYA9 428 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 MON1BQ7L1V2 547 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 ACMSDQ8TDX5 336 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 PRRG3Q9BZD7 231 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 CDH19Q9H159 772 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 BACE2Q9Y5Z0 518 aa11.31□□□□□ -0.6
AMBRA1-211ENST00000533727 KPNA4O00629 521 aaPredicted RBP11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 DGKIO75912 1065 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 MLYCDO95822 493 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 BMPR1AP36894 532 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 RXRGP48443 463 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 SUZ12Q15022 739 aaKnown RBP11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 RALGPS1Q5JS13 557 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 RINLQ6ZS11 566 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 MTDHQ86UE4 582 aaKnown RBP11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 TRIM69Q86WT6 500 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 IFNLR1Q8IU57 520 aaPredicted RBP11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 P2RY11Q96G91 374 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 DNAJC1Q96KC8 554 aaKnown RBP11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 FERD3LQ96RJ6 166 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 NSUN3Q9H649 340 aaKnown RBP11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 EFCAB1Q9HAE3 211 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 ACP6Q9NPH0 428 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 FAM58BPP0C7Q3 252 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 ASPAP45381 313 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 ATP1A4Q13733 1029 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 CYP51A1Q16850 503 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 WDR45BQ5MNZ6 344 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 PLEKHM3Q6ZWE6 761 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 DAW1Q8N136 415 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 HDDC3Q8N4P3 179 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 WDR60Q8WVS4 1066 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 AP2M1Q96CW1 435 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 APOPT1Q96IL0 206 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 ZFRQ96KR1 1074 aaKnown RBP11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 DPEP3Q9H4B8 488 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 CAPN10Q9HC96 672 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 DDX18Q9NVP1 670 aaKnown RBP11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 EVLQ9UI08 416 aaPredicted RBP11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 ASF1AQ9Y294 204 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 MATN3O15232 486 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 RPP40O75818 363 aaKnown RBP11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 BMP6P22004 513 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 FLT3P36888 993 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 NOVP48745 357 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 DGKEP52429 567 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 BHLHB9Q6PI77 547 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 CRELD2Q6UXH1 353 aaPredicted RBP11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 RTL10Q7L3V2 364 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 STYXQ8WUJ0 223 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 EXOC2Q96KP1 924 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 PRICKLE1Q96MT3 831 aaPredicted RBP11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 MRPS26Q9BYN8 205 aaKnown RBP11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 SHCBP1LQ9BZQ2 653 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 CORO1CQ9ULV4 474 aaPredicted RBP11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 EDDM13A0A1B0GTR0 161 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms