RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 TCEA3O75764 348 aa12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 TNFP01375 233 aa12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 SERPING1P05155 500 aa12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 MPOP05164 745 aa12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 ELFN1P0C7U0 828 aa12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 TGM2P21980 687 aa12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 NFKBIAP25963 317 aa12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 IL1R2P27930 398 aa12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 ITPKBP27987 946 aa12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 HSPA9P38646 679 aaKnown RBP12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 SRP54P61011 504 aaKnown RBP12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 GABREP78334 506 aa12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 FANCCQ00597 558 aa12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 MTM1Q13496 603 aa12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 ZNF235Q14590 738 aa12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 ISXQ2M1V0 245 aa12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 SMTNL2Q2TAL5 461 aa12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 SOWAHCQ53LP3 525 aaPredicted RBP12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 RBM44Q6ZP01 1051 aaKnown RBP12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 ARHGAP36Q6ZRI8 547 aa12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 POLNQ7Z5Q5 900 aa12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 ZSWIM9Q86XI8 627 aa12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 GKN2Q86XP6 184 aa12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 SLC35F3Q8IY50 421 aa12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 NSMCE1Q8WV22 266 aa12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 HSPH1Q92598 858 aa12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 TSACCQ96A04 125 aaPredicted RBP12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 FUCA2Q9BTY2 467 aa12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 CLPBQ9H078 707 aa12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 POLR1BQ9H9Y6 1135 aa12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 GULP1Q9UBP9 304 aa12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 KLQ9UEF7 1012 aa12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 IP6K2Q9UHH9 426 aa12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 PADI4Q9UM07 663 aa12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 OR1A2Q9Y585 309 aa12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 GOLGA6L19H0YKK7 550 aa12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 MYO1FO00160 1098 aa12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 CACNB4O00305 520 aaPredicted RBP12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 PDE2AO00408 941 aaPredicted RBP12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 TRAFD1O14545 582 aaPredicted RBP12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 DXOO77932 396 aaKnown RBP12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 RECQL5O94762 991 aaPredicted RBP12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 PRKCGP05129 697 aa12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 PCCBP05166 539 aa12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 HOXC4P09017 264 aaPredicted RBP12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 AMPD1P23109 780 aa12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 KELP23276 732 aa12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 SERPINB6P35237 376 aa12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 PCBP4P57723 403 aaKnown RBP12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 ERVPABLB-1P60509 514 aa12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 ZBED6P86452 979 aa12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 SLC10A7Q0GE19 358 aa12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 NFKBIBQ15653 356 aa12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 ALG11Q2TAA5 492 aa12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 HGSNATQ68CP4 663 aa12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 LIPIQ6XZB0 460 aa12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 DPPA4Q7L190 304 aa12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 LUZP1Q86V48 1076 aa12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 LRRC49Q8IUZ0 686 aa12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 ARL10Q8N8L6 244 aa12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 NIPA2Q8N8Q9 360 aa12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 ZNF248Q8NDW4 579 aa12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 OR6C4Q8NGE1 309 aa12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 CPLX3Q8WVH0 158 aa12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 TEKT4Q8WW24 435 aa12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 WDR92Q96MX6 357 aa12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 CSPG4P5Q96PW8 444 aa12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 LGMNQ99538 433 aa12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 THAP2Q9H0W7 228 aa12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 CBX8Q9HC52 389 aa12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 THSD1Q9NS62 852 aa12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 KCTD5Q9NXV2 234 aa12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 CAPN11Q9UMQ6 739 aa12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 LUC7L2Q9Y383 392 aaKnown RBP12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 DGKBQ9Y6T7 804 aa12.47□□□□□ -0.41
CAPRIN1-213ENST00000533562 SYCE3A1L190 88 aa12.46□□□□□ -0.41
CAPRIN1-213ENST00000533562 TNFRSF10CO14798 259 aa12.46□□□□□ -0.41
CAPRIN1-213ENST00000533562 SOCS5O75159 536 aa12.46□□□□□ -0.41
CAPRIN1-213ENST00000533562 RARAP10276 462 aa12.46□□□□□ -0.41
CAPRIN1-213ENST00000533562 RBMS1P29558 406 aaKnown RBP12.46□□□□□ -0.41
CAPRIN1-213ENST00000533562 TRIM23P36406 574 aa12.46□□□□□ -0.41
CAPRIN1-213ENST00000533562 CDH6P55285 790 aa12.46□□□□□ -0.41
CAPRIN1-213ENST00000533562 CCDC173Q0VFZ6 552 aa12.46□□□□□ -0.41
CAPRIN1-213ENST00000533562 COL9A2Q14055 689 aaPredicted RBP12.46□□□□□ -0.41
CAPRIN1-213ENST00000533562 SPIDRQ14159 915 aa12.46□□□□□ -0.41
CAPRIN1-213ENST00000533562 ACOX1Q15067 660 aa12.46□□□□□ -0.41
CAPRIN1-213ENST00000533562 HADHQ16836 314 aaKnown RBP12.46□□□□□ -0.41
CAPRIN1-213ENST00000533562 RALGPS1Q5JS13 557 aa12.46□□□□□ -0.41
CAPRIN1-213ENST00000533562 PERM1Q5SV97 790 aa12.46□□□□□ -0.41
CAPRIN1-213ENST00000533562 MARC1Q5VT66 337 aa12.46□□□□□ -0.41
CAPRIN1-213ENST00000533562 TP53INP2Q8IXH6 220 aa12.46□□□□□ -0.41
CAPRIN1-213ENST00000533562 OR56A4Q8NGH8 313 aa12.46□□□□□ -0.41
CAPRIN1-213ENST00000533562 PDCD6IPQ8WUM4 868 aaKnown RBP12.46□□□□□ -0.41
CAPRIN1-213ENST00000533562 CRELD1Q96HD1 420 aa12.46□□□□□ -0.41
CAPRIN1-213ENST00000533562 NUDCD1Q96RS6 583 aa12.46□□□□□ -0.41
CAPRIN1-213ENST00000533562 CCDC3Q9BQI4 270 aa12.46□□□□□ -0.41
CAPRIN1-213ENST00000533562 NUP85Q9BW27 656 aa12.46□□□□□ -0.41
CAPRIN1-213ENST00000533562 PRORYQ9H606 182 aa12.46□□□□□ -0.41
CAPRIN1-213ENST00000533562 ANAPC7Q9UJX3 599 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms