RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 FUCA2Q9BTY2 467 aa13.11□□□□□ -0.31
COPB1-209ENST00000533096 LGR4Q9BXB1 951 aa13.11□□□□□ -0.31
COPB1-209ENST00000533096 SLC12A9Q9BXP2 914 aa13.11□□□□□ -0.31
COPB1-209ENST00000533096 NOL6Q9H6R4 1146 aaKnown RBP13.11□□□□□ -0.31
COPB1-209ENST00000533096 FGF22Q9HCT0 170 aa13.11□□□□□ -0.31
COPB1-209ENST00000533096 FHOD1Q9Y613 1164 aa13.11□□□□□ -0.31
COPB1-209ENST00000533096 DGKBQ9Y6T7 804 aa13.11□□□□□ -0.31
COPB1-209ENST00000533096 TRBV23OR9-2A0A075B6M9 112 aa13.1□□□□□ -0.31
COPB1-209ENST00000533096 CXorf51AA0A1B0GTR3 108 aa13.1□□□□□ -0.31
COPB1-209ENST00000533096 CPNE6O95741 557 aa13.1□□□□□ -0.31
COPB1-209ENST00000533096 FGF3P11487 239 aaPredicted RBP13.1□□□□□ -0.31
COPB1-209ENST00000533096 CCR10P46092 362 aa13.1□□□□□ -0.31
COPB1-209ENST00000533096 SUOXP51687 545 aa13.1□□□□□ -0.31
COPB1-209ENST00000533096 POLE2P56282 527 aa13.1□□□□□ -0.31
COPB1-209ENST00000533096 KCNAB2Q13303 367 aa13.1□□□□□ -0.31
COPB1-209ENST00000533096 MTM1Q13496 603 aa13.1□□□□□ -0.31
COPB1-209ENST00000533096 HLTFQ14527 1009 aaKnown RBP eCLIP13.1□□□□□ -0.31
COPB1-209ENST00000533096 ACOX1Q15067 660 aa13.1□□□□□ -0.31
COPB1-209ENST00000533096 KLHDC7AQ5VTJ3 777 aa13.1□□□□□ -0.31
COPB1-209ENST00000533096 SLFN11Q7Z7L1 901 aa13.1□□□□□ -0.31
COPB1-209ENST00000533096 SLITRK4Q8IW52 837 aa13.1□□□□□ -0.31
COPB1-209ENST00000533096 NRSN1Q8IZ57 195 aa13.1□□□□□ -0.31
COPB1-209ENST00000533096 ZNF564Q8TBZ8 553 aaPredicted RBP13.1□□□□□ -0.31
COPB1-209ENST00000533096 FAM172AQ8WUF8 416 aa13.1□□□□□ -0.31
COPB1-209ENST00000533096 SLC20A1Q8WUM9 679 aa13.1□□□□□ -0.31
COPB1-209ENST00000533096 CASKIN2Q8WXE0 1202 aa13.1□□□□□ -0.31
COPB1-209ENST00000533096 PMEPA1Q969W9 287 aa13.1□□□□□ -0.31
COPB1-209ENST00000533096 TAAR9Q96RI9 348 aa13.1□□□□□ -0.31
COPB1-209ENST00000533096 NUDT22Q9BRQ3 303 aa13.1□□□□□ -0.31
COPB1-209ENST00000533096 C11orf70Q9BRQ4 267 aa13.1□□□□□ -0.31
COPB1-209ENST00000533096 NDST4Q9H3R1 872 aa13.1□□□□□ -0.31
COPB1-209ENST00000533096 LHX3Q9UBR4 397 aa13.1□□□□□ -0.31
COPB1-209ENST00000533096 UBA2Q9UBT2 640 aaPredicted RBP13.1□□□□□ -0.31
COPB1-209ENST00000533096 PIEZO2Q9H5I5 2752 aa13.09□□□□□ -0.31
COPB1-209ENST00000533096 IGHV5-10-1A0A0J9YXX1 117 aa13.09□□□□□ -0.31
COPB1-209ENST00000533096 STMND1H3BQB6 276 aa13.09□□□□□ -0.31
COPB1-209ENST00000533096 J3KR12 359 aa13.09□□□□□ -0.31
COPB1-209ENST00000533096 MAST4O15021 2626 aa13.09□□□□□ -0.31
COPB1-209ENST00000533096 NKX2-8O15522 239 aa13.09□□□□□ -0.31
COPB1-209ENST00000533096 NUDT21O43809 227 aaKnown RBP13.09□□□□□ -0.31
COPB1-209ENST00000533096 GFPT2O94808 682 aa13.09□□□□□ -0.31
COPB1-209ENST00000533096 ECEL1O95672 775 aa13.09□□□□□ -0.31
COPB1-209ENST00000533096 LSM8O95777 96 aaKnown RBP13.09□□□□□ -0.31
COPB1-209ENST00000533096 KRT3P12035 628 aa13.09□□□□□ -0.31
COPB1-209ENST00000533096 PNLIPP16233 465 aa13.09□□□□□ -0.31
COPB1-209ENST00000533096 KELP23276 732 aa13.09□□□□□ -0.31
COPB1-209ENST00000533096 CD82P27701 267 aa13.09□□□□□ -0.31
COPB1-209ENST00000533096 RFC1P35251 1148 aaPredicted RBP13.09□□□□□ -0.31
COPB1-209ENST00000533096 NOMO3P69849 1222 aa13.09□□□□□ -0.31
COPB1-209ENST00000533096 NRG1Q02297 640 aaPredicted RBP13.09□□□□□ -0.31
COPB1-209ENST00000533096 NCAPHQ15003 741 aa13.09□□□□□ -0.31
COPB1-209ENST00000533096 MAN2A1Q16706 1144 aa13.09□□□□□ -0.31
COPB1-209ENST00000533096 DENND2CQ68D51 928 aa13.09□□□□□ -0.31
COPB1-209ENST00000533096 ZSWIM9Q86XI8 627 aa13.09□□□□□ -0.31
COPB1-209ENST00000533096 RTL3Q8N8U3 475 aaKnown RBP13.09□□□□□ -0.31
COPB1-209ENST00000533096 HCAR2Q8TDS4 363 aa13.09□□□□□ -0.31
COPB1-209ENST00000533096 ZDHHC1Q8WTX9 485 aa13.09□□□□□ -0.31
COPB1-209ENST00000533096 ART4Q93070 314 aa13.09□□□□□ -0.31
COPB1-209ENST00000533096 CCDC74BQ96LY2 380 aa13.09□□□□□ -0.31
COPB1-209ENST00000533096 EPN3Q9H201 632 aa13.09□□□□□ -0.31
COPB1-209ENST00000533096 RETREG1Q9H6L5 497 aa13.09□□□□□ -0.31
COPB1-209ENST00000533096 CARS2Q9HA77 564 aaKnown RBP13.09□□□□□ -0.31
COPB1-209ENST00000533096 SLC39A1Q9NY26 324 aa13.09□□□□□ -0.31
COPB1-209ENST00000533096 ATP8A1Q9Y2Q0 1164 aa13.09□□□□□ -0.31
COPB1-209ENST00000533096 COL6A6A6NMZ7 2263 aa13.08□□□□□ -0.32
COPB1-209ENST00000533096 GOLGA6CA6NDK9 693 aa13.08□□□□□ -0.32
COPB1-209ENST00000533096 GOLGA6BA6NDN3 693 aa13.08□□□□□ -0.32
COPB1-209ENST00000533096 C2CD4BA6NLJ0 364 aa13.08□□□□□ -0.32
COPB1-209ENST00000533096 A8MU76 341 aa13.08□□□□□ -0.32
COPB1-209ENST00000533096 FGF1P05230 155 aa13.08□□□□□ -0.32
COPB1-209ENST00000533096 GOLGA6DP0CG33 693 aa13.08□□□□□ -0.32
COPB1-209ENST00000533096 PRKAR1AP10644 381 aa13.08□□□□□ -0.32
COPB1-209ENST00000533096 LIFP15018 202 aa13.08□□□□□ -0.32
COPB1-209ENST00000533096 AK4P27144 223 aaPredicted RBP13.08□□□□□ -0.32
COPB1-209ENST00000533096 CD1CP29017 333 aa13.08□□□□□ -0.32
COPB1-209ENST00000533096 CSTF2P33240 577 aaKnown RBP eCLIP13.08□□□□□ -0.32
COPB1-209ENST00000533096 UGT1A3P35503 534 aa13.08□□□□□ -0.32
COPB1-209ENST00000533096 HDAC4P56524 1084 aa13.08□□□□□ -0.32
COPB1-209ENST00000533096 YBEYP58557 167 aaPredicted RBP13.08□□□□□ -0.32
COPB1-209ENST00000533096 SERINC3Q13530 473 aa13.08□□□□□ -0.32
COPB1-209ENST00000533096 C4orf17Q53FE4 359 aa13.08□□□□□ -0.32
COPB1-209ENST00000533096 EFHC2Q5JST6 749 aa13.08□□□□□ -0.32
COPB1-209ENST00000533096 SNAP47Q5SQN1 464 aa13.08□□□□□ -0.32
COPB1-209ENST00000533096 DPY19L2P1Q6NXN4 242 aa13.08□□□□□ -0.32
COPB1-209ENST00000533096 WDR59Q6PJI9 974 aa13.08□□□□□ -0.32
COPB1-209ENST00000533096 SLC30A9Q6PML9 568 aa13.08□□□□□ -0.32
COPB1-209ENST00000533096 ARCQ7LC44 396 aa13.08□□□□□ -0.32
COPB1-209ENST00000533096 SRLQ86TD4 932 aa13.08□□□□□ -0.32
COPB1-209ENST00000533096 FAM129CQ86XR2 697 aa13.08□□□□□ -0.32
COPB1-209ENST00000533096 DNAAF5Q86Y56 855 aa13.08□□□□□ -0.32
COPB1-209ENST00000533096 CACNA2D3Q8IZS8 1091 aa13.08□□□□□ -0.32
COPB1-209ENST00000533096 KIAA1524Q8TCG1 905 aa13.08□□□□□ -0.32
COPB1-209ENST00000533096 PATE1Q8WXA2 126 aa13.08□□□□□ -0.32
COPB1-209ENST00000533096 CELF6Q96J87 481 aaKnown RBP13.08□□□□□ -0.32
COPB1-209ENST00000533096 ZNF641Q96N77 438 aaPredicted RBP13.08□□□□□ -0.32
COPB1-209ENST00000533096 TUBGCP2Q9BSJ2 902 aa13.08□□□□□ -0.32
COPB1-209ENST00000533096 ZMYND15Q9H091 742 aa13.08□□□□□ -0.32
COPB1-209ENST00000533096 ADNPQ9H2P0 1102 aa13.08□□□□□ -0.32
COPB1-209ENST00000533096 GOLGA6AQ9NYA3 693 aa13.08□□□□□ -0.32
COPB1-209ENST00000533096 B3GALT1Q9Y5Z6 326 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms