RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 TNFSF14O43557 240 aa15.44■□□□□ 0.06
CPSF1-210ENST00000532935 PGLSO95336 258 aa15.44■□□□□ 0.06
CPSF1-210ENST00000532935 TRIM16O95361 564 aa15.44■□□□□ 0.06
CPSF1-210ENST00000532935 TOP3BO95985 862 aaKnown RBP15.44■□□□□ 0.06
CPSF1-210ENST00000532935 HLA-DQB2P05538 268 aa15.44■□□□□ 0.06
CPSF1-210ENST00000532935 CES1P23141 567 aa15.44■□□□□ 0.06
CPSF1-210ENST00000532935 MARCKSL1P49006 195 aa15.44■□□□□ 0.06
CPSF1-210ENST00000532935 NAP1L1P55209 391 aaKnown RBP15.44■□□□□ 0.06
CPSF1-210ENST00000532935 YPEL5P62699 121 aa15.44■□□□□ 0.06
CPSF1-210ENST00000532935 DSC2Q02487 901 aa15.44■□□□□ 0.06
CPSF1-210ENST00000532935 TFDP2Q14188 446 aa15.44■□□□□ 0.06
CPSF1-210ENST00000532935 PDK1Q15118 436 aa15.44■□□□□ 0.06
CPSF1-210ENST00000532935 WSCD2Q2TBF2 565 aa15.44■□□□□ 0.06
CPSF1-210ENST00000532935 TPRG1LQ5T0D9 272 aa15.44■□□□□ 0.06
CPSF1-210ENST00000532935 ARMC12Q5T9G4 340 aa15.44■□□□□ 0.06
CPSF1-210ENST00000532935 LIPIQ6XZB0 460 aa15.44■□□□□ 0.06
CPSF1-210ENST00000532935 SPOCD1Q6ZMY3 1216 aa15.44■□□□□ 0.06
CPSF1-210ENST00000532935 KIAA1328Q86T90 577 aa15.44■□□□□ 0.06
CPSF1-210ENST00000532935 PARGQ86W56 976 aa15.44■□□□□ 0.06
CPSF1-210ENST00000532935 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.44■□□□□ 0.06
CPSF1-210ENST00000532935 OLFM3Q96PB7 478 aa15.44■□□□□ 0.06
CPSF1-210ENST00000532935 CAAP1Q9H8G2 361 aa15.44■□□□□ 0.06
CPSF1-210ENST00000532935 DNAJC28Q9NX36 388 aa15.44■□□□□ 0.06
CPSF1-210ENST00000532935 TOR4AQ9NXH8 423 aa15.44■□□□□ 0.06
CPSF1-210ENST00000532935 PHTF1Q9UMS5 762 aa15.44■□□□□ 0.06
CPSF1-210ENST00000532935 APOBEC2Q9Y235 224 aaKnown RBP15.44■□□□□ 0.06
CPSF1-210ENST00000532935 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.44■□□□□ 0.06
CPSF1-210ENST00000532935 RAI2Q9Y5P3 530 aa15.44■□□□□ 0.06
CPSF1-210ENST00000532935 TPRP12270 2363 aaKnown RBP15.44■□□□□ 0.06
CPSF1-210ENST00000532935 ASPMQ8IZT6 3477 aa15.44■□□□□ 0.06
CPSF1-210ENST00000532935 ACACBO00763 2458 aa15.43■□□□□ 0.06
CPSF1-210ENST00000532935 WDFY3Q8IZQ1 3526 aa15.43■□□□□ 0.06
CPSF1-210ENST00000532935 GOLGA6L6A8MZA4 724 aa15.43■□□□□ 0.06
CPSF1-210ENST00000532935 KCNK1O00180 336 aa15.43■□□□□ 0.06
CPSF1-210ENST00000532935 TOR1BO14657 336 aa15.43■□□□□ 0.06
CPSF1-210ENST00000532935 PPP1R12AO14974 1030 aaPredicted RBP15.43■□□□□ 0.06
CPSF1-210ENST00000532935 CST8O60676 142 aa15.43■□□□□ 0.06
CPSF1-210ENST00000532935 PIAS2O75928 621 aa15.43■□□□□ 0.06
CPSF1-210ENST00000532935 ZRANB2O95218 330 aaKnown RBP eCLIP15.43■□□□□ 0.06
CPSF1-210ENST00000532935 JCHAINP01591 159 aa15.43■□□□□ 0.06
CPSF1-210ENST00000532935 ATXN1LP0C7T5 689 aaKnown RBP15.43■□□□□ 0.06
CPSF1-210ENST00000532935 KRT10P13645 584 aa15.43■□□□□ 0.06
CPSF1-210ENST00000532935 DGKAP23743 735 aa15.43■□□□□ 0.06
CPSF1-210ENST00000532935 NFKBIAP25963 317 aa15.43■□□□□ 0.06
CPSF1-210ENST00000532935 VIPR1P32241 457 aa15.43■□□□□ 0.06
CPSF1-210ENST00000532935 THOP1P52888 689 aa15.43■□□□□ 0.06
CPSF1-210ENST00000532935 IFI35P80217 286 aaPredicted RBP15.43■□□□□ 0.06
CPSF1-210ENST00000532935 AP1B1Q10567 949 aa15.43■□□□□ 0.06
CPSF1-210ENST00000532935 PTK2BQ14289 1009 aa15.43■□□□□ 0.06
CPSF1-210ENST00000532935 IHHQ14623 411 aa15.43■□□□□ 0.06
CPSF1-210ENST00000532935 LLGL1Q15334 1064 aa15.43■□□□□ 0.06
CPSF1-210ENST00000532935 ZNF542PQ5EBM4 170 aa15.43■□□□□ 0.06
CPSF1-210ENST00000532935 TFDP3Q5H9I0 405 aa15.43■□□□□ 0.06
CPSF1-210ENST00000532935 KAZNQ674X7 775 aa15.43■□□□□ 0.06
CPSF1-210ENST00000532935 SLCO6A1Q86UG4 719 aa15.43■□□□□ 0.06
CPSF1-210ENST00000532935 RCOR2Q8IZ40 523 aa15.43■□□□□ 0.06
CPSF1-210ENST00000532935 SLC25A45Q8N413 288 aa15.43■□□□□ 0.06
CPSF1-210ENST00000532935 PNPLA1Q8N8W4 532 aa15.43■□□□□ 0.06
CPSF1-210ENST00000532935 EXD1Q8NHP7 514 aa15.43■□□□□ 0.06
CPSF1-210ENST00000532935 ARRDC2Q8TBH0 407 aa15.43■□□□□ 0.06
CPSF1-210ENST00000532935 PIH1D2Q8WWB5 315 aa15.43■□□□□ 0.06
CPSF1-210ENST00000532935 KRT35Q92764 455 aa15.43■□□□□ 0.06
CPSF1-210ENST00000532935 IL12RB2Q99665 862 aa15.43■□□□□ 0.06
CPSF1-210ENST00000532935 PLXNB3Q9ULL4 1909 aa15.43■□□□□ 0.06
CPSF1-210ENST00000532935 GOLGA8CPA6NN73 597 aa15.42■□□□□ 0.06
CPSF1-210ENST00000532935 HYAL3O43820 417 aaPredicted RBP15.42■□□□□ 0.06
CPSF1-210ENST00000532935 FZD6O60353 706 aa15.42■□□□□ 0.06
CPSF1-210ENST00000532935 RECQL5O94762 991 aaPredicted RBP15.42■□□□□ 0.06
CPSF1-210ENST00000532935 LDOC1O95751 146 aaPredicted RBP15.42■□□□□ 0.06
CPSF1-210ENST00000532935 CSF2P04141 144 aa15.42■□□□□ 0.06
CPSF1-210ENST00000532935 PDHA1P08559 390 aa15.42■□□□□ 0.06
CPSF1-210ENST00000532935 CYP2A6P11509 494 aaPredicted RBP15.42■□□□□ 0.06
CPSF1-210ENST00000532935 NME1P15531 152 aaKnown RBP15.42■□□□□ 0.06
CPSF1-210ENST00000532935 GM2AP17900 193 aa15.42■□□□□ 0.06
CPSF1-210ENST00000532935 SPINK2P20155 84 aa15.42■□□□□ 0.06
CPSF1-210ENST00000532935 NR2C2P49116 596 aa15.42■□□□□ 0.06
CPSF1-210ENST00000532935 HNRNPKP61978 463 aaKnown RBP eCLIP15.42■□□□□ 0.06
CPSF1-210ENST00000532935 NIPAL4Q0D2K0 466 aa15.42■□□□□ 0.06
CPSF1-210ENST00000532935 ZBTB17Q13105 803 aa15.42■□□□□ 0.06
CPSF1-210ENST00000532935 BZW1Q7L1Q6 419 aaKnown RBP15.42■□□□□ 0.06
CPSF1-210ENST00000532935 RAB44Q7Z6P3 723 aaPredicted RBP15.42■□□□□ 0.06
CPSF1-210ENST00000532935 CCDC50Q8IVM0 306 aa15.42■□□□□ 0.06
CPSF1-210ENST00000532935 CNTD1Q8N815 330 aa15.42■□□□□ 0.06
CPSF1-210ENST00000532935 ADAMTS14Q8WXS8 1223 aa15.42■□□□□ 0.06
CPSF1-210ENST00000532935 SCRN2Q96FV2 425 aa15.42■□□□□ 0.06
CPSF1-210ENST00000532935 RBM41Q96IZ5 413 aaKnown RBP15.42■□□□□ 0.06
CPSF1-210ENST00000532935 PDLIM2Q96JY6 352 aa15.42■□□□□ 0.06
CPSF1-210ENST00000532935 CNDP2Q96KP4 475 aaKnown RBP15.42■□□□□ 0.06
CPSF1-210ENST00000532935 MCCC1Q96RQ3 725 aaPredicted RBP15.42■□□□□ 0.06
CPSF1-210ENST00000532935 DESI2Q9BSY9 194 aa15.42■□□□□ 0.06
CPSF1-210ENST00000532935 SCNM1Q9BWG6 230 aa15.42■□□□□ 0.06
CPSF1-210ENST00000532935 BRD8Q9H0E9 1235 aa15.42■□□□□ 0.06
CPSF1-210ENST00000532935 UCKL1Q9NWZ5 548 aa15.42■□□□□ 0.06
CPSF1-210ENST00000532935 SAE1Q9UBE0 346 aaPredicted RBP15.42■□□□□ 0.06
CPSF1-210ENST00000532935 KLF15Q9UIH9 416 aa15.42■□□□□ 0.06
CPSF1-210ENST00000532935 hCG_1818297A0A087WSY0 165 aa15.41■□□□□ 0.06
CPSF1-210ENST00000532935 NPIPB15A6NHN6 443 aaPredicted RBP15.41■□□□□ 0.06
CPSF1-210ENST00000532935 H3BM21 787 aa15.41■□□□□ 0.06
CPSF1-210ENST00000532935 ENC1O14682 589 aa15.41■□□□□ 0.06
CPSF1-210ENST00000532935 DKK1O94907 266 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms