RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 PEX1O43933 1283 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 PSMD8P48556 350 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 GSSP48637 474 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 TRIM16LQ309B1 348 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 SNAP47Q5SQN1 464 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 OTUD3Q5T2D3 398 aaPredicted RBP14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 R3HCC1LQ7Z5L2 792 aaKnown RBP14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 STK32CQ86UX6 486 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 NPAS4Q8IUM7 802 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 BCAS3Q9H6U6 928 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 SORCS3Q9UPU3 1222 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 PIPSLA2A3N6 862 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 FAM25AB3EWG3 89 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 FAM25CB3EWG5 89 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 FAM25GB3EWG6 89 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 H2AFXP16104 143 aaPredicted RBP14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 TFEBP19484 476 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 CRATP43155 626 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 JAG1P78504 1218 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 INTS6LQ5JSJ4 861 aaKnown RBP14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 ANKS1BQ7Z6G8 1248 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 ZDHHC13Q8IUH4 622 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 CCDC103Q8IW40 242 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 DDHD1Q8NEL9 900 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 ZNF75CPQ92670 426 aaPredicted RBP14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 PCED1BQ96HM7 432 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 SNX27Q96L92 541 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 OLFM1Q99784 485 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 C9orf16Q9BUW7 83 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 KCNK4Q9NYG8 393 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 CD84Q9UIB8 345 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 CHKBQ9Y259 395 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 ANGPT4Q9Y264 503 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 ACTL7BQ9Y614 415 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 MYL12BO14950 172 aa14.83□□□□□ -0.03
PCDHA9-202ENST00000532602 SCAMP1O15126 338 aa14.83□□□□□ -0.03
PCDHA9-202ENST00000532602 CILPO75339 1184 aa14.83□□□□□ -0.03
PCDHA9-202ENST00000532602 CORO7P57737 925 aa14.83□□□□□ -0.03
PCDHA9-202ENST00000532602 SMIM11AP58511 58 aa14.83□□□□□ -0.03
PCDHA9-202ENST00000532602 EPS8Q12929 822 aa14.83□□□□□ -0.03
PCDHA9-202ENST00000532602 OR52L1Q8NGH7 329 aa14.83□□□□□ -0.03
PCDHA9-202ENST00000532602 CD101Q93033 1021 aa14.83□□□□□ -0.03
PCDHA9-202ENST00000532602 POP5Q969H6 163 aaKnown RBP14.83□□□□□ -0.03
PCDHA9-202ENST00000532602 NDRG2Q9UN36 371 aaKnown RBP14.83□□□□□ -0.03
PCDHA9-202ENST00000532602 TBC1D30Q9Y2I9 924 aa14.83□□□□□ -0.03
PCDHA9-202ENST00000532602 ZFP37Q9Y6Q3 630 aaPredicted RBP14.83□□□□□ -0.03
PCDHA9-202ENST00000532602 PTPRJQ12913 1337 aa14.83□□□□□ -0.03
PCDHA9-202ENST00000532602 LGR5O75473 907 aa14.83□□□□□ -0.03
PCDHA9-202ENST00000532602 UBOX5O94941 541 aa14.83□□□□□ -0.03
PCDHA9-202ENST00000532602 NPLOC4Q8TAT6 608 aa14.83□□□□□ -0.03
PCDHA9-202ENST00000532602 AUTS2Q8WXX7 1259 aa14.83□□□□□ -0.03
PCDHA9-202ENST00000532602 FAM124BQ9H5Z6 455 aaPredicted RBP14.83□□□□□ -0.03
PCDHA9-202ENST00000532602 PSMB9P28065 219 aa14.83□□□□□ -0.04
PCDHA9-202ENST00000532602 SP2Q02086 613 aa14.83□□□□□ -0.04
PCDHA9-202ENST00000532602 ADHFE1Q8IWW8 467 aa14.83□□□□□ -0.04
PCDHA9-202ENST00000532602 MYO19Q96H55 970 aa14.83□□□□□ -0.04
PCDHA9-202ENST00000532602 MRPL57Q9BQC6 102 aaKnown RBP14.83□□□□□ -0.04
PCDHA9-202ENST00000532602 TMEM79Q9BSE2 394 aa14.83□□□□□ -0.04
PCDHA9-202ENST00000532602 TBCDQ9BTW9 1192 aa14.83□□□□□ -0.04
PCDHA9-202ENST00000532602 TTLL2Q9BWV7 592 aa14.83□□□□□ -0.04
PCDHA9-202ENST00000532602 LHX5Q9H2C1 402 aa14.83□□□□□ -0.04
PCDHA9-202ENST00000532602 DHX33Q9H6R0 707 aaKnown RBP14.83□□□□□ -0.04
PCDHA9-202ENST00000532602 KCPQ6ZWJ8 1503 aa14.83□□□□□ -0.04
PCDHA9-202ENST00000532602 RNF225M0QZC1 329 aaPredicted RBP14.83□□□□□ -0.04
PCDHA9-202ENST00000532602 DCXO43602 365 aa14.83□□□□□ -0.04
PCDHA9-202ENST00000532602 MC4RP32245 332 aa14.83□□□□□ -0.04
PCDHA9-202ENST00000532602 NAGLUP54802 743 aa14.83□□□□□ -0.04
PCDHA9-202ENST00000532602 ZNF618Q5T7W0 954 aa14.83□□□□□ -0.04
PCDHA9-202ENST00000532602 PHYKPLQ8IUZ5 450 aa14.83□□□□□ -0.04
PCDHA9-202ENST00000532602 C19orf18Q8NEA5 215 aa14.83□□□□□ -0.04
PCDHA9-202ENST00000532602 BTBD10Q9BSF8 475 aa14.83□□□□□ -0.04
PCDHA9-202ENST00000532602 GEMIN8Q9NWZ8 242 aaKnown RBP14.83□□□□□ -0.04
PCDHA9-202ENST00000532602 GPN3Q9UHW5 284 aaPredicted RBP14.83□□□□□ -0.04
PCDHA9-202ENST00000532602 RPS6KA6Q9UK32 745 aa14.83□□□□□ -0.04
PCDHA9-202ENST00000532602 BTNL10A8MVZ5 291 aa14.83□□□□□ -0.04
PCDHA9-202ENST00000532602 CLOCKO15516 846 aa14.83□□□□□ -0.04
PCDHA9-202ENST00000532602 DLGAP3O95886 979 aa14.83□□□□□ -0.04
PCDHA9-202ENST00000532602 PARP15Q460N3 678 aa14.83□□□□□ -0.04
PCDHA9-202ENST00000532602 INO80DQ53TQ3 878 aaPredicted RBP14.83□□□□□ -0.04
PCDHA9-202ENST00000532602 XKR6Q5GH73 641 aa14.83□□□□□ -0.04
PCDHA9-202ENST00000532602 WASHC2DQ5SRD0 308 aa14.83□□□□□ -0.04
PCDHA9-202ENST00000532602 RASAL3Q86YV0 1011 aa14.83□□□□□ -0.04
PCDHA9-202ENST00000532602 PCDH18Q9HCL0 1135 aa14.83□□□□□ -0.04
PCDHA9-202ENST00000532602 COPG2Q9UBF2 871 aa14.83□□□□□ -0.04
PCDHA9-202ENST00000532602 HTR7P34969 479 aa14.82□□□□□ -0.04
PCDHA9-202ENST00000532602 RAB10P61026 200 aa14.82□□□□□ -0.04
PCDHA9-202ENST00000532602 CYP4F8P98187 520 aa14.82□□□□□ -0.04
PCDHA9-202ENST00000532602 PMF1Q6P1K2 205 aa14.82□□□□□ -0.04
PCDHA9-202ENST00000532602 KRT77Q7Z794 578 aa14.82□□□□□ -0.04
PCDHA9-202ENST00000532602 ZNF605Q86T29 641 aa14.82□□□□□ -0.04
PCDHA9-202ENST00000532602 TMEM192Q8IY95 271 aa14.82□□□□□ -0.04
PCDHA9-202ENST00000532602 CCDC185Q8N715 623 aa14.82□□□□□ -0.04
PCDHA9-202ENST00000532602 DBF4BQ8NFT6 615 aa14.82□□□□□ -0.04
PCDHA9-202ENST00000532602 RDH11Q8TC12 318 aa14.82□□□□□ -0.04
PCDHA9-202ENST00000532602 KCTD4Q8WVF5 259 aa14.82□□□□□ -0.04
PCDHA9-202ENST00000532602 ZNF214Q9UL59 606 aaPredicted RBP14.82□□□□□ -0.04
PCDHA9-202ENST00000532602 E9PAM4 449 aa14.82□□□□□ -0.04
PCDHA9-202ENST00000532602 STBD1O95210 358 aa14.82□□□□□ -0.04
PCDHA9-202ENST00000532602 GDF6Q6KF10 455 aaPredicted RBP14.82□□□□□ -0.04
PCDHA9-202ENST00000532602 ULK2Q8IYT8 1036 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms