RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 VIPR1P32241 457 aa22.38■■□□□ 1.17
LRRK1-208ENST00000532029 FDFT1P37268 417 aa22.38■■□□□ 1.17
LRRK1-208ENST00000532029 FNTAP49354 379 aa22.38■■□□□ 1.17
LRRK1-208ENST00000532029 SGCGQ13326 291 aa22.38■■□□□ 1.17
LRRK1-208ENST00000532029 SEL1L3Q68CR1 1132 aa22.38■■□□□ 1.17
LRRK1-208ENST00000532029 TTC27Q6P3X3 843 aa22.38■■□□□ 1.17
LRRK1-208ENST00000532029 CCDC137Q6PK04 289 aaKnown RBP22.38■■□□□ 1.17
LRRK1-208ENST00000532029 C4orf22Q6V702 233 aa22.38■■□□□ 1.17
LRRK1-208ENST00000532029 TAB3Q8N5C8 712 aaPredicted RBP22.38■■□□□ 1.17
LRRK1-208ENST00000532029 GRK7Q8WTQ7 553 aa22.38■■□□□ 1.17
LRRK1-208ENST00000532029 DNASE2BQ8WZ79 361 aa22.38■■□□□ 1.17
LRRK1-208ENST00000532029 MCCC1Q96RQ3 725 aaPredicted RBP22.38■■□□□ 1.17
LRRK1-208ENST00000532029 TRIB3Q96RU7 358 aa22.38■■□□□ 1.17
LRRK1-208ENST00000532029 MLPHQ9BV36 600 aaPredicted RBP22.38■■□□□ 1.17
LRRK1-208ENST00000532029 NCDNQ9UBB6 729 aa22.38■■□□□ 1.17
LRRK1-208ENST00000532029 FEZ2Q9UHY8 353 aaPredicted RBP22.38■■□□□ 1.17
LRRK1-208ENST00000532029 EIF2B4Q9UI10 523 aaKnown RBP22.38■■□□□ 1.17
LRRK1-208ENST00000532029 PCDHGA5Q9Y5G8 931 aa22.38■■□□□ 1.17
LRRK1-208ENST00000532029 A0A1W2PPC4 97 aa22.37■■□□□ 1.17
LRRK1-208ENST00000532029 IGLON5A6NGN9 336 aa22.37■■□□□ 1.17
LRRK1-208ENST00000532029 A8MX80 341 aa22.37■■□□□ 1.17
LRRK1-208ENST00000532029 ANKRD66B4E2M5 251 aa22.37■■□□□ 1.17
LRRK1-208ENST00000532029 C10orf142B7Z368 130 aa22.37■■□□□ 1.17
LRRK1-208ENST00000532029 LATO43561 262 aa22.37■■□□□ 1.17
LRRK1-208ENST00000532029 EPOP01588 193 aa22.37■■□□□ 1.17
LRRK1-208ENST00000532029 ALPIP09923 528 aa22.37■■□□□ 1.17
LRRK1-208ENST00000532029 ELFN1P0C7U0 828 aa22.37■■□□□ 1.17
LRRK1-208ENST00000532029 ETS1P14921 441 aa22.37■■□□□ 1.17
LRRK1-208ENST00000532029 MAOBP27338 520 aa22.37■■□□□ 1.17
LRRK1-208ENST00000532029 HNF1BP35680 557 aa22.37■■□□□ 1.17
LRRK1-208ENST00000532029 ARHGEF7Q14155 803 aa22.37■■□□□ 1.17
LRRK1-208ENST00000532029 QPCTQ16769 361 aa22.37■■□□□ 1.17
LRRK1-208ENST00000532029 ZNF284Q2VY69 593 aa22.37■■□□□ 1.17
LRRK1-208ENST00000532029 TMEM259Q4ZIN3 620 aa22.37■■□□□ 1.17
LRRK1-208ENST00000532029 FAXCQ5TGI0 409 aa22.37■■□□□ 1.17
LRRK1-208ENST00000532029 PRUNE1Q86TP1 453 aa22.37■■□□□ 1.17
LRRK1-208ENST00000532029 SYT12Q8IV01 421 aa22.37■■□□□ 1.17
LRRK1-208ENST00000532029 KLK6Q92876 244 aa22.37■■□□□ 1.17
LRRK1-208ENST00000532029 MRGPRX2Q96LB1 330 aa22.37■■□□□ 1.17
LRRK1-208ENST00000532029 GORASP1Q9BQQ3 440 aa22.37■■□□□ 1.17
LRRK1-208ENST00000532029 FICDQ9BVA6 458 aa22.37■■□□□ 1.17
LRRK1-208ENST00000532029 SUSD2Q9UGT4 822 aa22.37■■□□□ 1.17
LRRK1-208ENST00000532029 DMTF1Q9Y222 760 aa22.37■■□□□ 1.17
LRRK1-208ENST00000532029 NUMA1Q14980 2115 aa22.37■■□□□ 1.17
LRRK1-208ENST00000532029 ATXN2Q99700 1313 aaKnown RBP22.36■■□□□ 1.17
LRRK1-208ENST00000532029 ABCA7Q8IZY2 2146 aa22.36■■□□□ 1.17
LRRK1-208ENST00000532029 LOC285095A0A1B0GVY8 99 aa22.36■■□□□ 1.17
LRRK1-208ENST00000532029 CAPN8A6NHC0 703 aa22.36■■□□□ 1.17
LRRK1-208ENST00000532029 NPIPB15A6NHN6 443 aaPredicted RBP22.36■■□□□ 1.17
LRRK1-208ENST00000532029 SLC31A1O15431 190 aa22.36■■□□□ 1.17
LRRK1-208ENST00000532029 PSMD3O43242 534 aa22.36■■□□□ 1.17
LRRK1-208ENST00000532029 LZTS3O60299 673 aaPredicted RBP22.36■■□□□ 1.17
LRRK1-208ENST00000532029 TM7SF2O76062 418 aa22.36■■□□□ 1.17
LRRK1-208ENST00000532029 ZSCAN5DPP0CG00 497 aa22.36■■□□□ 1.17
LRRK1-208ENST00000532029 GNSP15586 552 aa22.36■■□□□ 1.17
LRRK1-208ENST00000532029 RPL22P35268 128 aaKnown RBP22.36■■□□□ 1.17
LRRK1-208ENST00000532029 LIG3P49916 1009 aa22.36■■□□□ 1.17
LRRK1-208ENST00000532029 RALGDSQ12967 914 aa22.36■■□□□ 1.17
LRRK1-208ENST00000532029 GLIS1Q8NBF1 620 aa22.36■■□□□ 1.17
LRRK1-208ENST00000532029 SLC17A9Q9BYT1 436 aa22.36■■□□□ 1.17
LRRK1-208ENST00000532029 ARRDC1-AS1Q9H2J1 176 aa22.36■■□□□ 1.17
LRRK1-208ENST00000532029 PILRBQ9UKJ0 227 aa22.36■■□□□ 1.17
LRRK1-208ENST00000532029 CCDC188H7C350 402 aa22.35■■□□□ 1.17
LRRK1-208ENST00000532029 PDE2AO00408 941 aaPredicted RBP22.35■■□□□ 1.17
LRRK1-208ENST00000532029 URI1O94763 535 aaPredicted RBP22.35■■□□□ 1.17
LRRK1-208ENST00000532029 GAS8O95995 478 aa22.35■■□□□ 1.17
LRRK1-208ENST00000532029 C6P13671 934 aa22.35■■□□□ 1.17
LRRK1-208ENST00000532029 HLA-DPA1P20036 260 aa22.35■■□□□ 1.17
LRRK1-208ENST00000532029 HOXD11P31277 338 aaPredicted RBP22.35■■□□□ 1.17
LRRK1-208ENST00000532029 HOXD12P35452 270 aa22.35■■□□□ 1.17
LRRK1-208ENST00000532029 MPLP40238 635 aa22.35■■□□□ 1.17
LRRK1-208ENST00000532029 LMAN1P49257 510 aa22.35■■□□□ 1.17
LRRK1-208ENST00000532029 RABEPKQ7Z6M1 372 aa22.35■■□□□ 1.17
LRRK1-208ENST00000532029 ALYREFQ86V81 257 aaKnown RBP22.35■■□□□ 1.17
LRRK1-208ENST00000532029 SLC25A41Q8N5S1 370 aa22.35■■□□□ 1.17
LRRK1-208ENST00000532029 SERAC1Q96JX3 654 aa22.35■■□□□ 1.17
LRRK1-208ENST00000532029 SRPK1Q96SB4 655 aaKnown RBP22.35■■□□□ 1.17
LRRK1-208ENST00000532029 C1QTNF7Q9BXJ2 289 aa22.35■■□□□ 1.17
LRRK1-208ENST00000532029 C1QTNF2Q9BXJ5 285 aa22.35■■□□□ 1.17
LRRK1-208ENST00000532029 DDX47Q9H0S4 455 aaKnown RBP22.35■■□□□ 1.17
LRRK1-208ENST00000532029 ETNK1Q9HBU6 452 aa22.35■■□□□ 1.17
LRRK1-208ENST00000532029 RAB6BQ9NRW1 208 aa22.35■■□□□ 1.17
LRRK1-208ENST00000532029 CEP192Q8TEP8 1941 aa22.34■■□□□ 1.17
LRRK1-208ENST00000532029 E7EVH7 732 aa22.34■■□□□ 1.17
LRRK1-208ENST00000532029 HEXIM1O94992 359 aaKnown RBP22.34■■□□□ 1.17
LRRK1-208ENST00000532029 ECEL1O95672 775 aa22.34■■□□□ 1.17
LRRK1-208ENST00000532029 PAK4O96013 591 aaPredicted RBP22.34■■□□□ 1.17
LRRK1-208ENST00000532029 AGTP01019 485 aa22.34■■□□□ 1.17
LRRK1-208ENST00000532029 KRT14P02533 472 aa22.34■■□□□ 1.17
LRRK1-208ENST00000532029 FGF1P05230 155 aa22.34■■□□□ 1.17
LRRK1-208ENST00000532029 AKT2P31751 481 aa22.34■■□□□ 1.17
LRRK1-208ENST00000532029 PTPRRQ15256 657 aa22.34■■□□□ 1.17
LRRK1-208ENST00000532029 CNGA3Q16281 694 aa22.34■■□□□ 1.17
LRRK1-208ENST00000532029 SIRPB2Q5JXA9 342 aa22.34■■□□□ 1.17
LRRK1-208ENST00000532029 NAPEPLDQ6IQ20 393 aa22.34■■□□□ 1.17
LRRK1-208ENST00000532029 LIPIQ6XZB0 460 aa22.34■■□□□ 1.17
LRRK1-208ENST00000532029 KLHDC8BQ8IXV7 354 aa22.34■■□□□ 1.17
LRRK1-208ENST00000532029 ZCCHC9Q8N567 271 aaKnown RBP22.34■■□□□ 1.17
LRRK1-208ENST00000532029 ASB12Q8WXK4 309 aa22.34■■□□□ 1.17
LRRK1-208ENST00000532029 RUNDC3BQ96NL0 473 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms