RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 HAPLN3Q96S86 360 aa18.23■□□□□ 0.51
SCN4B-205ENST00000531550 EPAS1Q99814 870 aa18.23■□□□□ 0.51
SCN4B-205ENST00000531550 DESI2Q9BSY9 194 aa18.23■□□□□ 0.51
SCN4B-205ENST00000531550 C1QTNF7Q9BXJ2 289 aa18.23■□□□□ 0.51
SCN4B-205ENST00000531550 CPEB1Q9BZB8 566 aaKnown RBP18.23■□□□□ 0.51
SCN4B-205ENST00000531550 PISDQ9UG56 409 aa18.23■□□□□ 0.51
SCN4B-205ENST00000531550 CXorf51AA0A1B0GTR3 108 aa18.22■□□□□ 0.51
SCN4B-205ENST00000531550 KRIT1O00522 736 aa18.22■□□□□ 0.51
SCN4B-205ENST00000531550 CCP110O43303 1012 aa18.22■□□□□ 0.51
SCN4B-205ENST00000531550 ZSCAN12O43309 604 aa18.22■□□□□ 0.51
SCN4B-205ENST00000531550 MMP20O60882 483 aa18.22■□□□□ 0.51
SCN4B-205ENST00000531550 TM7SF2O76062 418 aa18.22■□□□□ 0.51
SCN4B-205ENST00000531550 GSRP00390 522 aa18.22■□□□□ 0.51
SCN4B-205ENST00000531550 H2AFZP0C0S5 128 aa18.22■□□□□ 0.51
SCN4B-205ENST00000531550 JMJD7P0C870 316 aa18.22■□□□□ 0.51
SCN4B-205ENST00000531550 TCEA2Q15560 299 aa18.22■□□□□ 0.51
SCN4B-205ENST00000531550 LVRNQ6Q4G3 990 aa18.22■□□□□ 0.51
SCN4B-205ENST00000531550 H2AFVQ71UI9 128 aa18.22■□□□□ 0.51
SCN4B-205ENST00000531550 OR2AP1Q8NGE2 309 aa18.22■□□□□ 0.51
SCN4B-205ENST00000531550 SCG3Q8WXD2 468 aaKnown RBP18.22■□□□□ 0.51
SCN4B-205ENST00000531550 ARHGEF2Q92974 986 aaKnown RBP18.22■□□□□ 0.51
SCN4B-205ENST00000531550 KLHL32Q96NJ5 620 aa18.22■□□□□ 0.51
SCN4B-205ENST00000531550 TMEM74Q96NL1 305 aa18.22■□□□□ 0.51
SCN4B-205ENST00000531550 OSBPL1AQ9BXW6 950 aa18.22■□□□□ 0.51
SCN4B-205ENST00000531550 TMEM51Q9NW97 253 aa18.22■□□□□ 0.51
SCN4B-205ENST00000531550 PPARGC1AQ9UBK2 798 aaKnown RBP18.22■□□□□ 0.51
SCN4B-205ENST00000531550 PPP2R2CQ9Y2T4 447 aa18.22■□□□□ 0.51
SCN4B-205ENST00000531550 LOXL2Q9Y4K0 774 aa18.22■□□□□ 0.51
SCN4B-205ENST00000531550 PCDHGA4Q9Y5G9 962 aa18.22■□□□□ 0.51
SCN4B-205ENST00000531550 COL12A1Q99715 3063 aa18.22■□□□□ 0.51
SCN4B-205ENST00000531550 SPTA1P02549 2419 aa18.22■□□□□ 0.51
SCN4B-205ENST00000531550 LRP4O75096 1905 aa18.21■□□□□ 0.51
SCN4B-205ENST00000531550 NVLO15381 856 aaKnown RBP18.21■□□□□ 0.51
SCN4B-205ENST00000531550 PJA2O43164 708 aa18.21■□□□□ 0.51
SCN4B-205ENST00000531550 FTLP02792 175 aaPredicted RBP18.21■□□□□ 0.51
SCN4B-205ENST00000531550 ALPIP09923 528 aa18.21■□□□□ 0.51
SCN4B-205ENST00000531550 SFTPCP11686 197 aa18.21■□□□□ 0.51
SCN4B-205ENST00000531550 SCNN1AP37088 669 aa18.21■□□□□ 0.51
SCN4B-205ENST00000531550 BLKP51451 505 aa18.21■□□□□ 0.51
SCN4B-205ENST00000531550 VAV2P52735 878 aa18.21■□□□□ 0.51
SCN4B-205ENST00000531550 HK3P52790 923 aa18.21■□□□□ 0.51
SCN4B-205ENST00000531550 SNRPD1P62314 119 aaKnown RBP18.21■□□□□ 0.51
SCN4B-205ENST00000531550 IRF4Q15306 451 aa18.21■□□□□ 0.51
SCN4B-205ENST00000531550 MANEAQ5SRI9 462 aa18.21■□□□□ 0.51
SCN4B-205ENST00000531550 FAM102AQ5T9C2 384 aaPredicted RBP18.21■□□□□ 0.51
SCN4B-205ENST00000531550 BNIPLQ7Z465 357 aa18.21■□□□□ 0.51
SCN4B-205ENST00000531550 VASH2Q86V25 355 aa18.21■□□□□ 0.51
SCN4B-205ENST00000531550 PHF13Q86YI8 300 aaPredicted RBP18.21■□□□□ 0.51
SCN4B-205ENST00000531550 HID1Q8IV36 788 aa18.21■□□□□ 0.51
SCN4B-205ENST00000531550 CXorf40AQ8TE69 158 aa18.21■□□□□ 0.51
SCN4B-205ENST00000531550 SEMA3CQ99985 751 aa18.21■□□□□ 0.51
SCN4B-205ENST00000531550 LRRN3Q9H3W5 708 aa18.21■□□□□ 0.51
SCN4B-205ENST00000531550 TAS2R14Q9NYV8 317 aa18.21■□□□□ 0.51
SCN4B-205ENST00000531550 SEPT10Q9P0V9 454 aa18.21■□□□□ 0.51
SCN4B-205ENST00000531550 GPR34Q9UPC5 381 aa18.21■□□□□ 0.51
SCN4B-205ENST00000531550 ANKRD62A6NC57 917 aa18.2■□□□□ 0.5
SCN4B-205ENST00000531550 POP4O95707 220 aaKnown RBP18.2■□□□□ 0.5
SCN4B-205ENST00000531550 CTSEP14091 401 aa18.2■□□□□ 0.5
SCN4B-205ENST00000531550 ITIH1P19827 911 aa18.2■□□□□ 0.5
SCN4B-205ENST00000531550 FLT3P36888 993 aa18.2■□□□□ 0.5
SCN4B-205ENST00000531550 ETFBP38117 255 aa18.2■□□□□ 0.5
SCN4B-205ENST00000531550 GABRB2P47870 512 aa18.2■□□□□ 0.5
SCN4B-205ENST00000531550 GEMIN4P57678 1058 aaKnown RBP18.2■□□□□ 0.5
SCN4B-205ENST00000531550 POLD3Q15054 466 aaPredicted RBP18.2■□□□□ 0.5
SCN4B-205ENST00000531550 TBR1Q16650 682 aa18.2■□□□□ 0.5
SCN4B-205ENST00000531550 ALG11Q2TAA5 492 aa18.2■□□□□ 0.5
SCN4B-205ENST00000531550 MYLK3Q32MK0 819 aa18.2■□□□□ 0.5
SCN4B-205ENST00000531550 NAA35Q5VZE5 725 aa18.2■□□□□ 0.5
SCN4B-205ENST00000531550 TRNP1Q6NT89 227 aa18.2■□□□□ 0.5
SCN4B-205ENST00000531550 ZNF574Q6ZN55 896 aaPredicted RBP18.2■□□□□ 0.5
SCN4B-205ENST00000531550 TTC7BQ86TV6 843 aa18.2■□□□□ 0.5
SCN4B-205ENST00000531550 FAM131BQ86XD5 332 aa18.2■□□□□ 0.5
SCN4B-205ENST00000531550 XYLT1Q86Y38 959 aa18.2■□□□□ 0.5
SCN4B-205ENST00000531550 CPA5Q8WXQ8 436 aa18.2■□□□□ 0.5
SCN4B-205ENST00000531550 TSACCQ96A04 125 aaPredicted RBP18.2■□□□□ 0.5
SCN4B-205ENST00000531550 NDFIP2Q9NV92 336 aa18.2■□□□□ 0.5
SCN4B-205ENST00000531550 CHD5Q8TDI0 1954 aa18.2■□□□□ 0.5
SCN4B-205ENST00000531550 PRAMEF33A0A0G2JMD5 474 aa18.19■□□□□ 0.5
SCN4B-205ENST00000531550 TMCO5BA8MYB1 307 aa18.19■□□□□ 0.5
SCN4B-205ENST00000531550 PRAMEF10O60809 474 aa18.19■□□□□ 0.5
SCN4B-205ENST00000531550 RASGRP1O95267 797 aa18.19■□□□□ 0.5
SCN4B-205ENST00000531550 WT1P19544 449 aaPredicted RBP18.19■□□□□ 0.5
SCN4B-205ENST00000531550 ITIH2P19823 946 aa18.19■□□□□ 0.5
SCN4B-205ENST00000531550 MMP8P22894 467 aa18.19■□□□□ 0.5
SCN4B-205ENST00000531550 NSFP46459 744 aaKnown RBP18.19■□□□□ 0.5
SCN4B-205ENST00000531550 PEX5P50542 639 aa18.19■□□□□ 0.5
SCN4B-205ENST00000531550 ATXN7L2Q5T6C5 722 aaPredicted RBP18.19■□□□□ 0.5
SCN4B-205ENST00000531550 GDPD4Q6W3E5 623 aa18.19■□□□□ 0.5
SCN4B-205ENST00000531550 LEKR1Q6ZMV7 388 aa18.19■□□□□ 0.5
SCN4B-205ENST00000531550 KIAA1328Q86T90 577 aa18.19■□□□□ 0.5
SCN4B-205ENST00000531550 GKN2Q86XP6 184 aa18.19■□□□□ 0.5
SCN4B-205ENST00000531550 CCNJLQ8IV13 435 aa18.19■□□□□ 0.5
SCN4B-205ENST00000531550 REXO1L1PQ8IX06 675 aa18.19■□□□□ 0.5
SCN4B-205ENST00000531550 MCOLN2Q8IZK6 566 aa18.19■□□□□ 0.5
SCN4B-205ENST00000531550 OR6C4Q8NGE1 309 aa18.19■□□□□ 0.5
SCN4B-205ENST00000531550 C18orf8Q96DM3 657 aa18.19■□□□□ 0.5
SCN4B-205ENST00000531550 TRIM11Q96F44 468 aa18.19■□□□□ 0.5
SCN4B-205ENST00000531550 CFAP57Q96MR6 1250 aa18.19■□□□□ 0.5
SCN4B-205ENST00000531550 WRAP53Q9BUR4 548 aaKnown RBP18.19■□□□□ 0.5
SCN4B-205ENST00000531550 PTPN13Q12923 2485 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms