RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 FAM90A13PP0C7W8 464 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 FAM90A24PP0C7X0 464 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 CYP19A1P11511 503 aaPredicted RBP4.57□□□□□ -1.68
USP47-211ENST00000531513 SLC2A4P14672 509 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 MUTP22033 750 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 CDAP32320 146 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 IDUAP35475 653 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 SLC15A1P46059 708 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 RAD23AP54725 363 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 ARSFP54793 590 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 OLIG2Q13516 323 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 VEPH1Q14D04 833 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 LARS2Q15031 903 aaKnown RBP4.57□□□□□ -1.68
USP47-211ENST00000531513 ERMARDQ5T6L9 678 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 FAM171A1Q5VUB5 890 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 KIAA0930Q6ICG6 404 aaPredicted RBP4.57□□□□□ -1.68
USP47-211ENST00000531513 CPLX2Q6PUV4 134 aaKnown RBP4.57□□□□□ -1.68
USP47-211ENST00000531513 IL27RAQ6UWB1 636 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 DHRS13Q6UX07 377 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 VSTM1Q6UX27 236 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 RANBP10Q6VN20 620 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 GLDNQ6ZMI3 551 aaPredicted RBP4.57□□□□□ -1.68
USP47-211ENST00000531513 SLFN11Q7Z7L1 901 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 RHPN2Q8IUC4 686 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 PAQR4Q8N4S7 273 aaPredicted RBP4.57□□□□□ -1.68
USP47-211ENST00000531513 TMEM217Q8N7C4 229 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 IL17RCQ8NAC3 791 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 TDRD5Q8NAT2 981 aaKnown RBP4.57□□□□□ -1.68
USP47-211ENST00000531513 OR52N4Q8NGI2 321 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 OSR1Q8TAX0 266 aaPredicted RBP4.57□□□□□ -1.68
USP47-211ENST00000531513 GDPD5Q8WTR4 605 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 IP6K1Q92551 441 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 CCDC17Q96LX7 622 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 TEFMQ96QE5 360 aaKnown RBP4.57□□□□□ -1.68
USP47-211ENST00000531513 FRG2BQ96QU4 278 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 ABHD1Q96SE0 405 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 KLHL4Q9C0H6 718 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 NUAK2Q9H093 628 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 CXorf56Q9H5V9 222 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 LTB4R2Q9NPC1 389 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.57□□□□□ -1.68
USP47-211ENST00000531513 DECR2Q9NUI1 292 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 GRHL1Q9NZI5 618 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 C5AR2Q9P296 337 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 CPSF2Q9P2I0 782 aaKnown RBP4.57□□□□□ -1.68
USP47-211ENST00000531513 CNOT8Q9UFF9 292 aaKnown RBP4.57□□□□□ -1.68
USP47-211ENST00000531513 TNFSF13BQ9Y275 285 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 CCL27Q9Y4X3 112 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 UTYO14607 1347 aa4.56□□□□□ -1.68
USP47-211ENST00000531513 EMSYQ7Z589 1322 aa4.56□□□□□ -1.68
USP47-211ENST00000531513 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.56□□□□□ -1.68
USP47-211ENST00000531513 CLGNO14967 610 aa4.56□□□□□ -1.68
USP47-211ENST00000531513 DDAH2O95865 285 aa4.56□□□□□ -1.68
USP47-211ENST00000531513 TUBBP07437 444 aa4.56□□□□□ -1.68
USP47-211ENST00000531513 HOXB5P09067 269 aa4.56□□□□□ -1.68
USP47-211ENST00000531513 AKR1A1P14550 325 aa4.56□□□□□ -1.68
USP47-211ENST00000531513 HOXA13P31271 388 aaPredicted RBP4.56□□□□□ -1.68
USP47-211ENST00000531513 ZNF41P51814 821 aaPredicted RBP4.56□□□□□ -1.68
USP47-211ENST00000531513 PMS2P54278 862 aa4.56□□□□□ -1.68
USP47-211ENST00000531513 MFAP4P55083 255 aa4.56□□□□□ -1.68
USP47-211ENST00000531513 ZNF91Q05481 1191 aa4.56□□□□□ -1.68
USP47-211ENST00000531513 SRSF1Q07955 248 aaKnown RBP eCLIP4.56□□□□□ -1.68
USP47-211ENST00000531513 TFCP2Q12800 502 aa4.56□□□□□ -1.68
USP47-211ENST00000531513 SLC14A1Q13336 389 aa4.56□□□□□ -1.68
USP47-211ENST00000531513 FGFBP1Q14512 234 aa4.56□□□□□ -1.68
USP47-211ENST00000531513 PPP2R5BQ15173 497 aa4.56□□□□□ -1.68
USP47-211ENST00000531513 CDC37Q16543 378 aaPredicted RBP4.56□□□□□ -1.68
USP47-211ENST00000531513 PFKFB3Q16875 520 aaPredicted RBP4.56□□□□□ -1.68
USP47-211ENST00000531513 ALG11Q2TAA5 492 aa4.56□□□□□ -1.68
USP47-211ENST00000531513 ZSCAN23Q3MJ62 389 aa4.56□□□□□ -1.68
USP47-211ENST00000531513 C5orf22Q49AR2 442 aa4.56□□□□□ -1.68
USP47-211ENST00000531513 AWAT1Q58HT5 328 aa4.56□□□□□ -1.68
USP47-211ENST00000531513 NUGGCQ68CJ6 796 aa4.56□□□□□ -1.68
USP47-211ENST00000531513 C9orf47Q6ZRZ4 202 aa4.56□□□□□ -1.68
USP47-211ENST00000531513 SNX32Q86XE0 403 aa4.56□□□□□ -1.68
USP47-211ENST00000531513 C16orf71Q8IYS4 520 aaPredicted RBP4.56□□□□□ -1.68
USP47-211ENST00000531513 TMEM170AQ8WVE7 144 aa4.56□□□□□ -1.68
USP47-211ENST00000531513 SGCDQ92629 289 aa4.56□□□□□ -1.68
USP47-211ENST00000531513 ZKSCAN4Q969J2 545 aaPredicted RBP4.56□□□□□ -1.68
USP47-211ENST00000531513 ZNF653Q96CK0 615 aa4.56□□□□□ -1.68
USP47-211ENST00000531513 SIGLEC11Q96RL6 698 aa4.56□□□□□ -1.68
USP47-211ENST00000531513 FIZ1Q96SL8 496 aa4.56□□□□□ -1.68
USP47-211ENST00000531513 FRMD8Q9BZ67 464 aaPredicted RBP4.56□□□□□ -1.68
USP47-211ENST00000531513 PLEKHA4Q9H4M7 779 aa4.56□□□□□ -1.68
USP47-211ENST00000531513 PDZD7Q9H5P4 517 aa4.56□□□□□ -1.68
USP47-211ENST00000531513 KIF9Q9HAQ2 790 aa4.56□□□□□ -1.68
USP47-211ENST00000531513 GRPEL1Q9HAV7 217 aa4.56□□□□□ -1.68
USP47-211ENST00000531513 SLC6A13Q9NSD5 602 aa4.56□□□□□ -1.68
USP47-211ENST00000531513 PLK2Q9NYY3 685 aa4.56□□□□□ -1.68
USP47-211ENST00000531513 SEC63Q9UGP8 760 aaKnown RBP4.56□□□□□ -1.68
USP47-211ENST00000531513 PTRH2Q9Y3E5 179 aaKnown RBP4.56□□□□□ -1.68
USP47-211ENST00000531513 hCG_1809904A0A1W2PP81 198 aa4.55□□□□□ -1.68
USP47-211ENST00000531513 A0A1W2PPE2 198 aa4.55□□□□□ -1.68
USP47-211ENST00000531513 A0A1W2PR64 198 aa4.55□□□□□ -1.68
USP47-211ENST00000531513 RNF8O76064 485 aa4.55□□□□□ -1.68
USP47-211ENST00000531513 TOMM40O96008 361 aa4.55□□□□□ -1.68
USP47-211ENST00000531513 TFP02787 698 aa4.55□□□□□ -1.68
USP47-211ENST00000531513 HSP90AB1P08238 724 aaKnown RBP4.55□□□□□ -1.68
USP47-211ENST00000531513 PSG1P11464 419 aa4.55□□□□□ -1.68
USP47-211ENST00000531513 KRT10P13645 584 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms