RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 INTS2Q9H0H0 1204 aaKnown RBP3.01□□□□□ -1.93
NUP98-218ENST00000530516 KCNN2Q9H2S1 579 aa3.01□□□□□ -1.93
NUP98-218ENST00000530516 C20orf141Q9NUB4 165 aa3.01□□□□□ -1.93
NUP98-218ENST00000530516 BEX4Q9NWD9 120 aaPredicted RBP3.01□□□□□ -1.93
NUP98-218ENST00000530516 BABAM1Q9NWV8 329 aa3.01□□□□□ -1.93
NUP98-218ENST00000530516 CISD1Q9NZ45 108 aaKnown RBP3.01□□□□□ -1.93
NUP98-218ENST00000530516 MALT1Q9UDY8 824 aa3.01□□□□□ -1.93
NUP98-218ENST00000530516 SLCO3A1Q9UIG8 710 aa3.01□□□□□ -1.93
NUP98-218ENST00000530516 CDC14AQ9UNH5 594 aa3.01□□□□□ -1.93
NUP98-218ENST00000530516 CARD8Q9Y2G2 431 aa3.01□□□□□ -1.93
NUP98-218ENST00000530516 KIF26BQ2KJY2 2108 aa3.01□□□□□ -1.93
NUP98-218ENST00000530516 MAGEA13PA6NCF6 341 aa3□□□□□ -1.93
NUP98-218ENST00000530516 ZNF587BE7ETH6 402 aa3□□□□□ -1.93
NUP98-218ENST00000530516 GAGE7O76087 117 aa3□□□□□ -1.93
NUP98-218ENST00000530516 NDUFB4O95168 129 aa3□□□□□ -1.93
NUP98-218ENST00000530516 GALTP07902 379 aa3□□□□□ -1.93
NUP98-218ENST00000530516 LINC00271P0C7V0 271 aa3□□□□□ -1.93
NUP98-218ENST00000530516 GAGE12FP0CL80 117 aa3□□□□□ -1.93
NUP98-218ENST00000530516 GAGE12GP0CL81 117 aa3□□□□□ -1.93
NUP98-218ENST00000530516 GAGE12IP0CL82 117 aa3□□□□□ -1.93
NUP98-218ENST00000530516 ETFAP13804 333 aa3□□□□□ -1.93
NUP98-218ENST00000530516 GGT5P36269 586 aa3□□□□□ -1.93
NUP98-218ENST00000530516 PGM1P36871 562 aa3□□□□□ -1.93
NUP98-218ENST00000530516 CDH15P55291 814 aa3□□□□□ -1.93
NUP98-218ENST00000530516 GAGE1Q13065 139 aa3□□□□□ -1.93
NUP98-218ENST00000530516 GAGE4Q13068 117 aa3□□□□□ -1.93
NUP98-218ENST00000530516 DHX8Q14562 1220 aaKnown RBP3□□□□□ -1.93
NUP98-218ENST00000530516 OASLQ15646 514 aaKnown RBP3□□□□□ -1.93
NUP98-218ENST00000530516 MRGPRG-AS1Q2M3A8 158 aa3□□□□□ -1.93
NUP98-218ENST00000530516 PRICKLE4Q2TBC4 344 aa3□□□□□ -1.93
NUP98-218ENST00000530516 AMZ1Q400G9 498 aa3□□□□□ -1.93
NUP98-218ENST00000530516 SLC22A25Q6T423 547 aa3□□□□□ -1.93
NUP98-218ENST00000530516 DSTYKQ6XUX3 929 aa3□□□□□ -1.93
NUP98-218ENST00000530516 NEK10Q6ZWH5 1172 aa3□□□□□ -1.93
NUP98-218ENST00000530516 LRRC8DQ7L1W4 858 aa3□□□□□ -1.93
NUP98-218ENST00000530516 SMIM29Q86T20 159 aa3□□□□□ -1.93
NUP98-218ENST00000530516 TADA2BQ86TJ2 420 aa3□□□□□ -1.93
NUP98-218ENST00000530516 SATL1Q86VE3 508 aa3□□□□□ -1.93
NUP98-218ENST00000530516 TMTC1Q8IUR5 882 aa3□□□□□ -1.93
NUP98-218ENST00000530516 MUC20Q8N307 709 aaPredicted RBP3□□□□□ -1.93
NUP98-218ENST00000530516 ZNF441Q8N8Z8 693 aa3□□□□□ -1.93
NUP98-218ENST00000530516 CREB3L4Q8TEY5 395 aa3□□□□□ -1.93
NUP98-218ENST00000530516 RND1Q92730 232 aa3□□□□□ -1.93
NUP98-218ENST00000530516 MAELQ96JY0 434 aaKnown RBP3□□□□□ -1.93
NUP98-218ENST00000530516 FUZQ9BT04 418 aa3□□□□□ -1.93
NUP98-218ENST00000530516 HAUS8Q9BT25 410 aa3□□□□□ -1.93
NUP98-218ENST00000530516 MKKSQ9NPJ1 570 aaPredicted RBP3□□□□□ -1.93
NUP98-218ENST00000530516 SMYD2Q9NRG4 433 aa3□□□□□ -1.93
NUP98-218ENST00000530516 DONSONQ9NYP3 566 aa3□□□□□ -1.93
NUP98-218ENST00000530516 C1RLQ9NZP8 487 aa3□□□□□ -1.93
NUP98-218ENST00000530516 NOL12Q9UGY1 213 aaKnown RBP eCLIP3□□□□□ -1.93
NUP98-218ENST00000530516 CNOT7Q9UIV1 285 aaKnown RBP3□□□□□ -1.93
NUP98-218ENST00000530516 TINAGQ9UJW2 476 aa3□□□□□ -1.93
NUP98-218ENST00000530516 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3□□□□□ -1.93
NUP98-218ENST00000530516 PAM16Q9Y3D7 125 aa3□□□□□ -1.93
NUP98-218ENST00000530516 SAA2-SAA4A0A096LPE2 208 aa2.99□□□□□ -1.93
NUP98-218ENST00000530516 GAGE10A6NGK3 116 aa2.99□□□□□ -1.93
NUP98-218ENST00000530516 KRTAP9-6A8MVA2 160 aa2.99□□□□□ -1.93
NUP98-218ENST00000530516 PRAC2D3DTV9 90 aa2.99□□□□□ -1.93
NUP98-218ENST00000530516 TAF4O00268 1085 aa2.99□□□□□ -1.93
NUP98-218ENST00000530516 SOCS6O14544 535 aa2.99□□□□□ -1.93
NUP98-218ENST00000530516 BCAT2O15382 392 aaPredicted RBP2.99□□□□□ -1.93
NUP98-218ENST00000530516 PLRG1O43660 514 aaKnown RBP2.99□□□□□ -1.93
NUP98-218ENST00000530516 BUB3O43684 328 aa2.99□□□□□ -1.93
NUP98-218ENST00000530516 CYC1P08574 325 aa2.99□□□□□ -1.93
NUP98-218ENST00000530516 HNRNPA1P09651 372 aaKnown RBP eCLIP2.99□□□□□ -1.93
NUP98-218ENST00000530516 PCNAP12004 261 aa2.99□□□□□ -1.93
NUP98-218ENST00000530516 SHMT1P34896 483 aa2.99□□□□□ -1.93
NUP98-218ENST00000530516 EIF2S3P41091 472 aaKnown RBP2.99□□□□□ -1.93
NUP98-218ENST00000530516 TLE2Q04725 743 aa2.99□□□□□ -1.93
NUP98-218ENST00000530516 ZNF155Q12901 538 aaPredicted RBP2.99□□□□□ -1.93
NUP98-218ENST00000530516 RNPS1Q15287 305 aaKnown RBP2.99□□□□□ -1.93
NUP98-218ENST00000530516 TAF11Q15544 211 aa2.99□□□□□ -1.93
NUP98-218ENST00000530516 CALCRLQ16602 461 aa2.99□□□□□ -1.93
NUP98-218ENST00000530516 PPP6R3Q5H9R7 873 aaPredicted RBP2.99□□□□□ -1.93
NUP98-218ENST00000530516 TXNDC8Q6A555 127 aa2.99□□□□□ -1.93
NUP98-218ENST00000530516 FBXO46Q6PJ61 603 aaPredicted RBP2.99□□□□□ -1.93
NUP98-218ENST00000530516 MEX3BQ6ZN04 569 aaKnown RBP2.99□□□□□ -1.93
NUP98-218ENST00000530516 TRIM63Q969Q1 353 aa2.99□□□□□ -1.93
NUP98-218ENST00000530516 FBXL8Q96CD0 374 aa2.99□□□□□ -1.93
NUP98-218ENST00000530516 ZNF385AQ96PM9 386 aaKnown RBP2.99□□□□□ -1.93
NUP98-218ENST00000530516 MPHOSPH8Q99549 860 aa2.99□□□□□ -1.93
NUP98-218ENST00000530516 TKTL2Q9H0I9 626 aa2.99□□□□□ -1.93
NUP98-218ENST00000530516 PLEKHA4Q9H4M7 779 aa2.99□□□□□ -1.93
NUP98-218ENST00000530516 RRN3Q9NYV6 651 aa2.99□□□□□ -1.93
NUP98-218ENST00000530516 SMARCAL1Q9NZC9 954 aa2.99□□□□□ -1.93
NUP98-218ENST00000530516 ZNF224Q9NZL3 707 aa2.99□□□□□ -1.93
NUP98-218ENST00000530516 HCN3Q9P1Z3 774 aa2.99□□□□□ -1.93
NUP98-218ENST00000530516 LSM4Q9Y4Z0 139 aaKnown RBP2.99□□□□□ -1.93
NUP98-218ENST00000530516 SNX9Q9Y5X1 595 aa2.99□□□□□ -1.93
NUP98-218ENST00000530516 A0A1W2PQM1 296 aa2.98□□□□□ -1.93
NUP98-218ENST00000530516 BMPR1BO00238 502 aa2.98□□□□□ -1.93
NUP98-218ENST00000530516 MID1O15344 667 aa2.98□□□□□ -1.93
NUP98-218ENST00000530516 NCAM2O15394 837 aa2.98□□□□□ -1.93
NUP98-218ENST00000530516 GUCY1B2O75343 617 aa2.98□□□□□ -1.93
NUP98-218ENST00000530516 MMP2P08253 660 aa2.98□□□□□ -1.93
NUP98-218ENST00000530516 F7P08709 466 aaPredicted RBP2.98□□□□□ -1.93
NUP98-218ENST00000530516 GPTP24298 496 aa2.98□□□□□ -1.93
NUP98-218ENST00000530516 PEX5P50542 639 aa2.98□□□□□ -1.93
NUP98-218ENST00000530516 UFM1P61960 85 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms