RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	GBE1	Q04446	702 aa		14.71	□□□□□ -0.06
NR1H3-231	ENST00000529540	GALNT2	Q10471	571 aa		14.71	□□□□□ -0.06
NR1H3-231	ENST00000529540	HNRNPD	Q14103	355 aa	Known RBP	14.71	□□□□□ -0.06
NR1H3-231	ENST00000529540	LY6G5C	Q5SRR4	150 aa		14.71	□□□□□ -0.06
NR1H3-231	ENST00000529540	AFMID	Q63HM1	303 aa		14.71	□□□□□ -0.06
NR1H3-231	ENST00000529540	ULK2	Q8IYT8	1036 aa		14.71	□□□□□ -0.06
NR1H3-231	ENST00000529540	CARNMT1	Q8N4J0	409 aa		14.71	□□□□□ -0.06
NR1H3-231	ENST00000529540	ATPAF2	Q8N5M1	289 aa		14.71	□□□□□ -0.06
NR1H3-231	ENST00000529540	TFB1M	Q8WVM0	346 aa	Known RBP	14.71	□□□□□ -0.06
NR1H3-231	ENST00000529540	NCSTN	Q92542	709 aa		14.71	□□□□□ -0.06
NR1H3-231	ENST00000529540	LRRC39	Q96DD0	335 aa		14.71	□□□□□ -0.06
NR1H3-231	ENST00000529540	LRRC3B	Q96PB8	259 aa		14.71	□□□□□ -0.06
NR1H3-231	ENST00000529540	GBP5	Q96PP8	586 aa		14.71	□□□□□ -0.06
NR1H3-231	ENST00000529540	PANX3	Q96QZ0	392 aa		14.71	□□□□□ -0.06
NR1H3-231	ENST00000529540	ECSIT	Q9BQ95	431 aa		14.71	□□□□□ -0.06
NR1H3-231	ENST00000529540	KXD1	Q9BQD3	176 aa		14.71	□□□□□ -0.06
NR1H3-231	ENST00000529540	TRPV5	Q9NQA5	729 aa		14.71	□□□□□ -0.06
NR1H3-231	ENST00000529540	ETNK2	Q9NVF9	386 aa		14.71	□□□□□ -0.06
NR1H3-231	ENST00000529540	NDE1	Q9NXR1	346 aa		14.71	□□□□□ -0.06
NR1H3-231	ENST00000529540	ARMCX1	Q9P291	453 aa		14.71	□□□□□ -0.06
NR1H3-231	ENST00000529540	THEG	Q9P2T0	379 aa		14.71	□□□□□ -0.06
NR1H3-231	ENST00000529540	DOCK8	Q8NF50	2099 aa		14.7	□□□□□ -0.06
NR1H3-231	ENST00000529540	NEDD8-MDP1	E9PL57	170 aa		14.7	□□□□□ -0.06
NR1H3-231	ENST00000529540	CACNG3	O60359	315 aa		14.7	□□□□□ -0.06
NR1H3-231	ENST00000529540	RFPL1	O75677	317 aa		14.7	□□□□□ -0.06
NR1H3-231	ENST00000529540	STK10	O94804	968 aa	Known RBP	14.7	□□□□□ -0.06
NR1H3-231	ENST00000529540	CYP17A1	P05093	508 aa		14.7	□□□□□ -0.06
NR1H3-231	ENST00000529540	LYN	P07948	512 aa		14.7	□□□□□ -0.06
NR1H3-231	ENST00000529540	TYR	P14679	529 aa		14.7	□□□□□ -0.06
NR1H3-231	ENST00000529540	GDI1	P31150	447 aa		14.7	□□□□□ -0.06
NR1H3-231	ENST00000529540	GARS	P41250	739 aa	Known RBP	14.7	□□□□□ -0.06
NR1H3-231	ENST00000529540	RPL26	P61254	145 aa	Known RBP	14.7	□□□□□ -0.06
NR1H3-231	ENST00000529540	GNA12	Q03113	381 aa		14.7	□□□□□ -0.06
NR1H3-231	ENST00000529540	DYNC1I2	Q13409	638 aa	Known RBP	14.7	□□□□□ -0.06
NR1H3-231	ENST00000529540	RUNX3	Q13761	415 aa		14.7	□□□□□ -0.06
NR1H3-231	ENST00000529540	DMC1	Q14565	340 aa		14.7	□□□□□ -0.06
NR1H3-231	ENST00000529540	CDHR3	Q6ZTQ4	885 aa		14.7	□□□□□ -0.06
NR1H3-231	ENST00000529540	PRPF39	Q86UA1	669 aa	Known RBP	14.7	□□□□□ -0.06
NR1H3-231	ENST00000529540	TMEM25	Q86YD3	366 aa		14.7	□□□□□ -0.06
NR1H3-231	ENST00000529540	CRLF3	Q8IUI8	442 aa		14.7	□□□□□ -0.06
NR1H3-231	ENST00000529540	NPW	Q8N729	165 aa		14.7	□□□□□ -0.06
NR1H3-231	ENST00000529540	FATE1	Q969F0	183 aa		14.7	□□□□□ -0.06
NR1H3-231	ENST00000529540	LINC00597	Q9H2U6	94 aa		14.7	□□□□□ -0.06
NR1H3-231	ENST00000529540	STN1	Q9H668	368 aa	Known RBP	14.7	□□□□□ -0.06
NR1H3-231	ENST00000529540	BRD9	Q9H8M2	597 aa		14.7	□□□□□ -0.06
NR1H3-231	ENST00000529540	BCLAF3	A2AJT9	711 aa	Known RBP	14.69	□□□□□ -0.06
NR1H3-231	ENST00000529540	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	14.69	□□□□□ -0.06
NR1H3-231	ENST00000529540		H7C0C1	242 aa		14.69	□□□□□ -0.06
NR1H3-231	ENST00000529540	AOC1	P19801	751 aa		14.69	□□□□□ -0.06
NR1H3-231	ENST00000529540	CCNC	P24863	283 aa		14.69	□□□□□ -0.06
NR1H3-231	ENST00000529540	EIF2D	P41214	584 aa	Known RBP	14.69	□□□□□ -0.06
NR1H3-231	ENST00000529540	ATP5O	P48047	213 aa		14.69	□□□□□ -0.06
NR1H3-231	ENST00000529540	SGSH	P51688	502 aa		14.69	□□□□□ -0.06
NR1H3-231	ENST00000529540	TMPRSS15	P98073	1019 aa		14.69	□□□□□ -0.06
NR1H3-231	ENST00000529540	PPID	Q08752	370 aa	Known RBP	14.69	□□□□□ -0.06
NR1H3-231	ENST00000529540	HEATR6	Q6AI08	1181 aa	Known RBP	14.69	□□□□□ -0.06
NR1H3-231	ENST00000529540	DARS2	Q6PI48	645 aa	Known RBP	14.69	□□□□□ -0.06
NR1H3-231	ENST00000529540	TIFAB	Q6ZNK6	161 aa		14.69	□□□□□ -0.06
NR1H3-231	ENST00000529540	NUDT18	Q6ZVK8	323 aa		14.69	□□□□□ -0.06
NR1H3-231	ENST00000529540	METTL3	Q86U44	580 aa	Known RBP	14.69	□□□□□ -0.06
NR1H3-231	ENST00000529540	CIR1	Q86X95	450 aa	Predicted RBP	14.69	□□□□□ -0.06
NR1H3-231	ENST00000529540	MCU	Q8NE86	351 aa		14.69	□□□□□ -0.06
NR1H3-231	ENST00000529540	CSGALNACT1	Q8TDX6	532 aa		14.69	□□□□□ -0.06
NR1H3-231	ENST00000529540	TSGA13	Q96PP4	275 aa		14.69	□□□□□ -0.06
NR1H3-231	ENST00000529540	QKI	Q96PU8	341 aa	Known RBP eCLIP	14.69	□□□□□ -0.06
NR1H3-231	ENST00000529540	VAT1	Q99536	393 aa		14.69	□□□□□ -0.06
NR1H3-231	ENST00000529540	C2orf49	Q9BVC5	232 aa	Predicted RBP	14.69	□□□□□ -0.06
NR1H3-231	ENST00000529540	KLC2	Q9H0B6	622 aa		14.69	□□□□□ -0.06
NR1H3-231	ENST00000529540	MUC3B	Q9H195	1237 aa		14.69	□□□□□ -0.06
NR1H3-231	ENST00000529540	EBF3	Q9H4W6	596 aa		14.69	□□□□□ -0.06
NR1H3-231	ENST00000529540	KIF26A	Q9ULI4	1882 aa	Predicted RBP	14.69	□□□□□ -0.06
NR1H3-231	ENST00000529540	DOCK4	Q8N1I0	1966 aa		14.69	□□□□□ -0.06
NR1H3-231	ENST00000529540	DFFA	O00273	331 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	BUD23	O43709	281 aa	Known RBP	14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	KRT38	O76015	456 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	BPGM	P07738	259 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	CRHR1	P34998	444 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	CPA2	P48052	419 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	SERPINB9	P50453	376 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	XIAP	P98170	497 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	PFKP	Q01813	784 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	BIRC2	Q13490	618 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	GRM2	Q14416	872 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	CHI3L2	Q15782	390 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	ITPRIPL2	Q3MIP1	535 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	CES4A	Q5XG92	561 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	CXorf57	Q6NSI4	855 aa	Known RBP	14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	IZUMO2	Q6UXV1	221 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	C4orf22	Q6V702	233 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	ZNF354C	Q86Y25	554 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	NUDCD3	Q8IVD9	361 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	ARHGAP12	Q8IWW6	846 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	TAB3	Q8N5C8	712 aa	Predicted RBP	14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	PPM1N	Q8N819	430 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	CCNY	Q8ND76	341 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	DNASE1L2	Q92874	299 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	ACD	Q96AP0	544 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	MYEOV	Q96EZ4	313 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	CFAP36	Q96G28	342 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	MSANTD3	Q96H12	275 aa		14.68	□□□□□ -0.06

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms